Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kazachstania_20servazzii_20[genbank_20GCA_5F002214935.1_202017-07- 05] 91 sequences; 12,836,848 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq4 174 3e-38 seq10 158 3e-33 seq3 145 2e-29 seq14 87.8 4e-12 >seq4 Length=966351 Score = 174 bits (192), Expect = 3e-38 Identities = 161/204 (79%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 282896 ATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTG 282955 |||||| ||| ||| ||||||||||||||||| | || || | ||||| || ||||| Sbjct 914332 ATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCGGATAGTGTTCTCCCATCTTCCAGTTG 914273 Query 282956 TTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTT 283015 ||| || |||||||||||||| |||||||| || || ||||| || ||||||||||| Sbjct 914272 TTTACCTGCAAAGATCAAACGCTGTTGGTCTGGTGGGATCCCCTCTTTATCTTGGATCTT 914213 Query 283016 TGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGT 283075 | ||| ||| | ||||| ||||| || | ||| || || || ||||| |||||||| || Sbjct 914212 GGATTTCACGTTGTCGATGGTGTCGGACGATTCCACCTCTAGGGTGATGGTCTTACCAGT 914153 Query 283076 CAAAGTCTTAACGAATATCTGCAT 283099 ||||||||| || || || ||||| Sbjct 914152 CAAAGTCTTCACAAAAATTTGCAT 914129 Score = 170 bits (188), Expect = 4e-37 Identities = 154/194 (79%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || ||||||||||||||||| | || || | ||||| || |||||||| || |||||| Sbjct 913407 TCCTTTTGGATGTTGTAGTCGGATAGTGTTCTCCCATCTTCCAGTTGTTTACCTGCAAAG 913348 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 |||||||| |||||||| || || ||||| || ||||||||||| | ||| ||| | Sbjct 913347 ATCAAACGCTGTTGGTCTGGTGGGATCCCCTCTTTATCTTGGATCTTGGATTTCACGTTG 913288 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088 ||||| || || || | ||| || || || ||||| |||||||| ||||||||||||||| Sbjct 913287 TCGATGGTATCGGACGATTCCACCTCTAGGGTGATGGTCTTACCAGTCAAAGTCTTAACG 913228 Query 283089 AATATCTGCATTTT 283102 || || ||||| || Sbjct 913227 AAAATTTGCATATT 913214 Score = 170 bits (188), Expect = 4e-37 Identities = 160/204 (78%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 282896 ATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTG 282955 |||||| ||| ||| ||||||||||||||||| | || || | ||||| || ||||| Sbjct 914104 ATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCGGATAGTGTTCTCCCATCTTCCAGTTG 914045 Query 282956 TTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTT 283015 ||| || |||||||||||||| |||||||| || || ||||| || ||||||||||| Sbjct 914044 TTTACCTGCAAAGATCAAACGCTGTTGGTCTGGTGGGATCCCCTCTTTATCTTGGATCTT 913985 Query 283016 TGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGT 283075 | ||| ||| | ||||| || || || | ||| || || || ||||| |||||||| || Sbjct 913984 GGATTTCACGTTGTCGATGGTATCGGACGATTCCACCTCTAGGGTGATGGTCTTACCAGT 913925 Query 283076 CAAAGTCTTAACGAATATCTGCAT 283099 ||||||||| || || || ||||| Sbjct 913924 CAAAGTCTTGACAAAAATTTGCAT 913901 Score = 159 bits (176), Expect = 7e-34 Identities = 150/191 (79%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || ||||||||||||||||| | || || | ||||| || |||||||| || |||||| Sbjct 913635 TCCTTTTGGATGTTGTAGTCGGATAGTGTTCTCCCATCTTCCAGTTGTTTACCTGCAAAG 913576 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 |||||||| |||||||| || || ||||| || ||||||||||| | ||| ||| | Sbjct 913575 ATCAAACGCTGTTGGTCTGGTGGGATCCCCTCTTTATCTTGGATCTTGGATTTCACGTTG 913516 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088 ||||| || || || | ||| || || || ||||| |||||||| ||||||||||| || Sbjct 913515 TCGATGGTATCGGACGATTCCACCTCTAGGGTGATGGTCTTACCAGTCAAAGTCTTGACA 913456 Query 283089 AATATCTGCAT 283099 || || ||||| Sbjct 913455 AAAATTTGCAT 913445 Score = 159 bits (176), Expect = 7e-34 Identities = 150/191 (79%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || ||||||||||||||||| | || || | ||||| || |||||||| || |||||| Sbjct 913863 TCCTTTTGGATGTTGTAGTCGGATAGTGTTCTCCCATCTTCCAGTTGTTTACCTGCAAAG 913804 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 |||||||| |||||||| || || ||||| || ||||||||||| | ||| ||| | Sbjct 913803 ATCAAACGCTGTTGGTCTGGTGGGATCCCCTCTTTATCTTGGATCTTGGATTTCACGTTG 913744 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088 ||||| || || || | ||| || || || ||||| |||||||| ||||||||||| || Sbjct 913743 TCGATGGTATCGGACGATTCCACCTCTAGGGTGATGGTCTTACCAGTCAAAGTCTTGACA 913684 Query 283089 AATATCTGCAT 283099 || || ||||| Sbjct 913683 AAAATTTGCAT 913673 >seq10 Length=639015 Score = 158 bits (174), Expect = 3e-33 Identities = 159/207 (77%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 282896 ATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTG 282955 |||||| ||| ||| ||||||||||||||||||| | || | ||||| |||| ||| Sbjct 8846 ATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAAAGTTCTACCATCTTCTAATTG 8787 Query 282956 TTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTT 283015 || || |||||||| || | |||||||||| || ||||| || |||||||| ||||| Sbjct 8786 CTTACCAGCAAAGATTAATCTTTGTTGGTCAGGTGGGATACCTTCTTTGTCTTGAATCTT 8727 Query 283016 TGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGT 283075 | || || | || |||||||| |||| ||| ||||| | || || |||||||| || Sbjct 8726 AGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCTAAGGTAATGGTCTTACCAGT 8667 Query 283076 CAAAGTCTTAACGAATATCTGCATTTT 283102 ||||| ||||| || || |||||||| Sbjct 8666 TAAAGTTTTAACAAAAATTTGCATTTT 8640 >seq3 Length=1031415 Score = 145 bits (160), Expect = 2e-29 Identities = 142/183 (78%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 ||| ||||||||||| ||||||| | || | || || |||| |||||| || ||||| Sbjct 37063 TTCCTTTTGGATGTTATAGTCAGATAAAGTTCTACCGTCTTCTAATTGTTTACCAGCAAA 37004 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 ||| || | |||||| ||| |||||||| ||||| ||||| ||||| | || || | Sbjct 37003 GATTAATCTTTGTTGATCAGGTGGAATACCTTCCTTATCTTGAATCTTAGACTTAACATT 36944 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 ||| || ||||| |||| ||| ||||| | ||| || |||||||| |||||||||||||| Sbjct 36943 ATCAATGGTGTCAGAAGATTCAACTTCTAAAGTAATAGTCTTACCAGTCAAAGTCTTAAC 36884 Query 283088 GAA 283090 || Sbjct 36883 AAA 36881 >seq14 Length=553263 Score = 87.8 bits (96), Expect = 4e-12 Identities = 178/257 (69%), Gaps = 8/257 (3%) Strand=Plus/Plus Query 230158 AACAAATCGTCACAGAAGTAGTTGCAAATGAAAAGGAGTTCATTTG-CGACGCTATTCCT 230216 || |||| | ||||||| |||| || |||||| || | ||| ||| ||| | || Sbjct 155028 AAAAAATTATTACAGAAGCTGTTGAAATTGAAAAA-AGATATTTTATCGATGCTTTACCA 155086 Query 230217 TGCCGTCTTATC-GGCATGAATGCTGATCTCATGGGGCAATATATCGAATTCGTAGCTGA 230275 | || |||| || |||||||||||| | ||| |||||| | |||||||| ||||| Sbjct 155087 -GTCGCTTTATTAGGTATGAATGCTGATTTAATGAATCAATATGTTGAATTCGTTGCTGA 155145 Query 230276 TCGTATTTTCGTGGCGCTAGGGTACGAGAAAGTGTATAACTCCAAGAACCCCTTCGCTTT 230335 | | | || || || | || | ||||| | | |||| | | || || |||| ||| Sbjct 155146 TAGATTATTAGTCGCTTTCGGTAATAAGAAATTCTTTAACGTCGAAAATCCATTCGATTT 155205 Query 230336 TATGGAGCTCATTTCACTCCAG--GGGAAAACTAACTTCTTCGAAAAGCGTGTCAGCGAT 230393 ||||| || || || || || || || || |||||||||||| | ||| |||| Sbjct 155206 CATGGA--AAATATCTCTTTAGCTGGTAAGACCAATTTCTTCGAAAAGAGAGTCTCCGAT 155263 Query 230394 TATCAAAGGCCCGGTGT 230410 ||||||| | | ||||| Sbjct 155264 TATCAAAAGGCTGGTGT 155280 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046737979567514