Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20lactis_20[genbank_20GCA_5F002151565.1_202017-05-19] 7 sequences; 10,682,662 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq3 232 8e-56 seq6 196 6e-45 >seq3 Length=1752996 Score = 232 bits (256), Expect = 8e-56 Identities = 847/1318 (64%), Gaps = 16/1318 (1%) Strand=Plus/Plus Query 53702 AATGCAATAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATC 53761 || || || || |||| ||||||||||| || ||| || | ||||| | || Sbjct 676340 AACGCGATGGAAGCCAAGTTACAAACGGCGGTTTCTGTAGGGTCAGAATATTCGACAATT 676399 Query 53762 TCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTA 53821 ||| || | || | |||| ||||| || | || | |||||| ||||| |||| Sbjct 676400 TCACAACACAAGTTTGAAGACTTAATGGTACCCAGGTTCTTTTGATTGCTCTTCAAGTTA 676459 Query 53822 CACGCATCCTTATAAAGAATGAATGGCGTACCAGTTTCAATCTGGGATTCTATAATCGCT 53881 || |||||||| ||||| ||||| || ||||| ||||| | || | ||| | || || Sbjct 676460 CAAGCATCCTTGTAAAGCATGAACGGAGTACCTGTTTCTGTTTGCGCTTCCAAGATAGCA 676519 Query 53882 TTCCAGACGACACGAGCCTTTATTATAGATTTGTATCTCTT--TTCTCTTTCGTATAGTG 53939 | ||| | | ||||| | | ||| || | | |||||||||||| || Sbjct 676520 TACCATAATTTTTGGGCCTTAACGGTT--TTTCTACCACGACCTTCTCTTTCGTAACGTT 676577 Query 53940 TATACAATCGTTCAAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGAC 53999 ||||| | |||||| || || || || | | || || ||| ||||| ||| Sbjct 676578 CATACATTTCTTCAAATTCTTCACCGTAAGCGTCAGGTAAACCGGGAGCTTCATTAGGAG 676637 Query 54000 ACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAA 54059 | | ||| | ||| || || | | ||||| ||||| || | |||||||||||| | Sbjct 676638 AGAACAAGGTCCAGTCCTGGTTCTTTTCCACTCTCTTCATGAACAAATCAGGAATCCACA 676697 Query 54060 GAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGA 54119 || |||| |||||| | | | ||| || ||||| |||||| | | ||| | Sbjct 676698 ATGCAGGGAATAAATCTCTAGCACGAATTTCTTCCTTTCCATGATTCTTCCTGATATCAA 676757 Query 54120 GGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTT 54179 ||| | | |||||||||||||| ||||| | ||||| | | | || || | | Sbjct 676758 TGAAATCGAAGATATCAGAATGCCATGGTTCAATGTATAAAGCGAAGGCACCTGGTCTCT 676817 Query 54180 TGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAA 54239 |||| || || || || | ||| | ||| ||||| || | || | | ||||||||| | Sbjct 676818 TGTTACCACCTTGGTCAACGTAACGAGCAGTGTTGTTGAAGACACGGATCATTGGAATGA 676877 Query 54240 TACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAA 54299 ||||||| || | || ||||| || | || || ||| | | ||| || || || Sbjct 676878 TACCATTAGAAGTTCCGTTGGTACCAGCAATGTAAGAACCAGTAGAACGGATGTTGTGAA 676937 Query 54300 TTGATAGACCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCAT 54359 | | || || || || || | || ||||| | || ||| || || ||||| | Sbjct 676938 TGTGCAACCCAATACCACCAGCAGTCTTTGAGATCATAGCACATTCCTTCAAGGTATCGT 676997 Query 54360 AGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGAC 54419 | || || || || ||| || |||| || | ||||| |||||||| || Sbjct 676998 AAATACCTTCGATGGAATCCTCTTTCATAGCAACCAAGAAACAAGATGACATTTGAGGAT 677057 Query 54420 GACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTA 54479 || ||| || || || || || |||||||||||||| || || || ||| ||| | || Sbjct 677058 GAGGAGTACCAGCGTTGAACAATGTAGGAGAAGCGTGGGTGAAATATCTTTGAGACATTA 677117 Query 54480 GATTGTACGTCTCGATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCA 54539 | ||||| ||||| | || |||||||| ||||| || || || || | || Sbjct 677118 GGTTGTAAGTCTCTAATACTCGTTCTATATCGTTACCGTGAATACCAACAGCCACTCTCA 677177 Query 54540 TTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTT 54599 | | |||||| || || | |||| | | ||| | ||| ||| |||||| || || Sbjct 677178 TAATCATGTGTTGTGGACGTTCAGCAACCTTACCATCGATTCTCAACAAGTAAGAACGTT 677237 Query 54600 CCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACTGAGT 54659 | || || || ||||| || || ||| || || |||| ||||||| ||| | |||| Sbjct 677238 CTAAGGTCTTGAAACCGAAGTAATTGAATTGGAAATCTCTGTCGTAAACGATAGCAGAGT 677297 Query 54660 TGAGTTTATCCTTATATTTGTTAACTACATCCATGGTAATACTT-----GAAATAATCGG 54714 | | | ||||||| | | || ||| | ||| |||| ||||| || || Sbjct 677298 TCAAAGTGTCCTTATTATCCATGAC--AATC--TTATAA-ACTTCGTCGGAAATCATTGG 677352 Query 54715 AGAATGTTTCCCATTTTTAGGATTGACATAGTTAAATAAATCCTTCATCACTTCACTAAA 54774 || || | ||| | | ||||| || | | | || || | | |||| | || Sbjct 677353 GGAGTGAATACCAGTCCTTGGATTAACCCATTGGTACAAGTCGTCAACAACTTGAGAGAA 677412 Query 54775 TAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATA 54834 ||||| | |||| ||||| | ||| || | || |||||||| || || | ||||| Sbjct 677413 CTGTTTTGTAGTTTGCTTGTGCAAATTAGAAATAGCAATTCTAGCAGCCAGGGTAGCATA 677472 Query 54835 ATCCGGATGTTGTGTAGTACAAGT-GGCTGCTATTTCGGCTGTCAGAGTGTCCAATTCTA 54893 ||| ||||| || || || || || | |||| || | || | | |||||||| | Sbjct 677473 ATCTGGATGGATAGTGGT-CATGTAAGCACATGTTTCAGCAGCCAAATTATCCAATTCCA 677531 Query 54894 CCGTTGTTACTCCATTATATATTCCTTGGATAACCTTCATAGCTATTTTAATAGGATCTA 54953 | || || || || | ||| | || |||| | || ||||||| || ||| | Sbjct 677532 CGGTAGTAACACCTTCATAAACACCAGAAATAATACGCTGAGTGATTTTAACAGCATCGA 677591 Query 54954 TATGATCAGTGTTTAAGCCATAACATAATTTTCTAATACGAGATGTGATTTTATCAAA 55011 |||| | | | ||| |||||||| | | | ||| | ||||| |||||||| Sbjct 677592 TATGTTTTGCATCTAAACCATAACAGAGACGTGACACACGCGCAGTGATCTTATCAAA 677649 >seq6 Length=2601250 Score = 196 bits (216), Expect = 6e-45 Identities = 590/893 (66%), Gaps = 36/893 (4%) Strand=Plus/Minus Query 23844 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTT 23903 |||||||| || || | ||||||||||| || || ||||| | || || |||||| Sbjct 1394650 TTTTGGTAATCGGAGACTCTCTTTTCGAAAAAGTTGGTCTTACCAGCCAAGGAGATATTT 1394591 Query 23904 TCCATGAAATCGGATGGATTGGTAACATT-ATAGA-TTCTTTTAAATCCCAATTC-AGAA 23960 |||||||||||| |||| ||||| ||||| | | | ||||| | | ||||| | | | Sbjct 1394590 TCCATGAAATCGAATGGGTTGGTGACATTGAAATATTTCTTGTTA--CCCAAGGCGACCA 1394533 Query 23961 ATCAATCTATCTGCGACAAACTCCATATATGTTTTCATCATTTCACAATTCATTCCTATA 24020 || ||||| || |||||||| |||| ||| ||||| | || ||||| || | Sbjct 1394532 AT-AATCTGTCGGCGACAAATTCCACGTATTGGTTCATTAAGTCTGCGTTCATACCCAAT 1394474 Query 24021 AGTTTAACTGGAAGAGC-CACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTAT 24079 || ||| || ||||| || ||| | |||| |||||| ||| || ||||| || Sbjct 1394473 AGAGAAACGGGTAGAGCATCCATGAAGTATCTCTT-TTCAATTTCGACAGCTTCTGTAAT 1394415 Query 24080 AATAGATCTT----ACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAAC 24135 |||||| || ||||| | | ||| || | ||||| ||| | | || Sbjct 1394414 ----GATCTTTTCCACAATTTCTGGATTTGGTTTATTCTTCAAATGGGCAAAGAGTAGAC 1394359 Query 24136 ATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTC 24195 | || || || |||||||| || ||||||| || || ||||| || || || | | Sbjct 1394358 AGGCAAAGTCTGTATGTAGACCTTCATCTCTACAGATCAACTCGTTAGAGAAAGTCAAAC 1394299 Query 24196 CGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAA 24255 | ||||||| || ||| || | ||| || || | ||||| || || || ||||| | Sbjct 1394298 CAGGCATTAACCCCTTCTTCTTCAACCAGAAGATAGCAGCAAAGGAACCGGAGAAGAACA 1394239 Query 24256 TTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAACCGGCGCTGTCA---TGTA 24312 ||||| || || || || |||| | |||||| ||| | ||| ||| || | Sbjct 1394238 CACCTTCCACAGCAGCGAAAGCAACCAATCTTTCACCAAACAAGGCATCATCATCTTGAA 1394179 Query 24313 TCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAA 24372 |||| | |||||| || ||||| | ||| | || || || || |||||||| | Sbjct 1394178 TCCATCTGATAGCCCATTCAGCCTTTTCTTTAATTTGTGGGATAGTTTCGATAGCATTGA 1394119 Query 24373 AGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTT 24432 | | | | | |||| || ||| |||| ||| ||||||||||| | ||| | | Sbjct 1394118 ACAAAAACTCACTTTCCTTTGGATCCTTAATATAGGTATCAATCAACAAGGAATAAGTCT 1394059 Query 24433 CCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTC-GGTAATC 24491 | ||||| || || || || ||||| || || ||||||||| | || || ||| | Sbjct 1394058 CTGAATGGATATTCTCCATCATAATTTGGAACCCATAGAAACATTTCGCTTCTGGTGCT- 1394000 Query 24492 TGTACTTCTATACAAAATCGTTCT--GCTAAATTTTCATTCACTATTCCGTCACTGGCTG 24549 || ||||| | || ||||| | || ||||| || || || || || ||| | Sbjct 1393999 TGCACTTCAGCTGAGAA--GTTCTCCACCAAGTTTTCGTTAACGATACCATCCGAGGCAG 1393942 Query 24550 CAAAAAACGCCAATACATGTTTT----ATAAAATATTTTTCG-TCTGGT--GTTAGTTTA 24602 | || |||||||| | || | |||||| | ||||| ||| | || || Sbjct 1393941 CGAAGAACGCCAAAA----TTCTAGAGATAAAAAACCTTTCGTTCTCATTCATTCTGTTG 1393886 Query 24603 TTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCT 24662 |||||||| | | ||| || || | ||| | |||||| | ||||| || || || || Sbjct 1393885 TTCCAATCGTGCAAATCCTTGGACAAATCGATTTCTTCTGCAGTCCAGAAAGACGCTTCG 1393826 Query 24663 GCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAA 24715 ||| | ||||| | ||| || ||||| || | ||||| || | |||||| Sbjct 1393825 GCCCTCTTATATGCTTCCCAAATCTCATGGTACTTGATTGGGAAGAGAACAAA 1393773 Score = 167 bits (184), Expect = 3e-36 Identities = 586/903 (65%), Gaps = 29/903 (3%) Strand=Plus/Minus Query 53414 TCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTA 53473 ||||||||||| ||||| | ||| ||| ||| |||||||| || |||| || Sbjct 110987 TCAGCTAGTTCTGTGGAAGCCTCGATAGCAGCGTGATATATGGTTTCAAAAATCTGTTTG 110928 Query 53474 TTTAGA-TCTTGTGCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGC 53532 |||| | || | || || | ||||||||| | |||| || || | |||||| Sbjct 110927 TTTAAAGTCGCG-GCATCAACCGATTCAAATGGAGTACGGCAGAGCATGAATGTGTCTGC 110869 Query 53533 TAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTC-AGCTTCTG 53591 || |||||||| |||||| | | ||| || | ||| |||| ||||| ||| || | Sbjct 110868 CAACCCTTGAACCCCAATAGCCAAAGGCCTGTTTCTTATATTTCC-ATTTCTAGCCTCAG 110810 Query 53592 GAATAGGATAATAATTAATATCTATAATTTTATTGAGGTTTCTGACAATTACTTTGACCA 53651 ||| |||||| | | ||| ||| | ||| | ||| | || | || || || | Sbjct 110809 GAACAGGATATTTTCCCACATCGATAGTCCTATCTAAATTTTTAACGAGAACCTTAACAA 110750 Query 53652 CATCCTTCAGTTTGAGAAAATCAAATT------GTCCATCT--------ATT-ACAAACA 53696 ||| | ||||| | || |||||| ||||||| ||| ||| | Sbjct 110749 CATGATGTAGTTTCACGAAGTCAAATACAGGCGGTCCATCGGAACTCAAATTGACATAAG 110690 Query 53697 TGTTCAATGCAATAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTA 53756 | || |||| |||||| |||||||| || || ||||| | | | || | | Sbjct 110689 TAGGTAAGGCAACAGATGCTAGATTACAGACAGCAACCTCTTCTGGAGAGCTGTACTCGA 110630 Query 53757 TTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTT 53816 || || |||||||||| | ||||| || | ||||| |||||| |||| Sbjct 110629 CAATTTCGCAGCAAAGATTAGATGATTTGATAACGCCGAGATTTTTCTGATTAGATTTTT 110570 Query 53817 TGTTACACGCATCCTTATAAAGAATGAATGGCGTACCAGTTTCAATCTGGGATTCTATAA 53876 | ||||| ||||| ||||| || ||||| ||| ||||| || | || || | | Sbjct 110569 TATTACATGCATCTTTATAGAGCATGAACGGCACTCCAGTCTCCGTTTGACTTTGAAGTA 110510 Query 53877 TCGCTTTCCAGACGACACGAGCCTTTATTATAGATTTGTATCTCTT--TTCTCTTTCGTA 53934 || || ||| | | || || ||| | || || || |||| | ||||| Sbjct 110509 TCTCTGACCAAATTTGTTGCGCTTTCATTTTT--TTCCTAGGAATTAGTTCTTTCTCGTA 110452 Query 53935 TAGTGTATACAATCGT-TCAAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCAT 53993 | | ||| || | | ||||| || || || || || | ||||| ||||| Sbjct 110451 TCTTTCATA-AAGCTTATCAAATTCATCACCATAACAATCAGTTAGCCCAGGTGCTTCAT 110393 Query 53994 CCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAA 54053 | || | | | ||||| ||| | | || || || || ||||||||||||||||| | Sbjct 110392 CTGGGGAAAAAATTGACCAGTCTTCATTATTCTCAACCCGCTTCATAAAGAGATCAGGTA 110333 Query 54054 TCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAA 54113 |||| || || ||| | |||||| | || |||||| || || ||||||| | | Sbjct 110332 TCCAGAGGGCATAAAACAAATCTCTTGCCCTCATTTCCTCTTTGCCATGATTCTTTCTCA 110273 Query 54114 GATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGTCATAA--CTCC 54171 | | | ||| | || || || | |||||| || ||||| ||||| || || |||| Sbjct 110272 GTTGCAAGAAGTCAATTATGTCTGCATGCCAGGGCTCCAAATATAT--ACAGAATGCTCC 110215 Query 54172 AGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACAT 54231 || | ||| ||||| || ||||| | || || || |||||||| |||| || ||||| Sbjct 110214 TGGTCTTTTATTTCCACCTTGATCAACATACCTGGCAGTGTTATTGAAAACCCTTAACAT 110155 Query 54232 TGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAAT 54291 ||| | || |||||||||| || |||| || |||||||| |||| | ||||| || Sbjct 110154 TGGCACAAGGCCATTGGATGTTCCGTTGGAACCTGAGATATATGCTCCATTTGCACGGAT 110095 Query 54292 ATT 54294 ||| Sbjct 110094 ATT 110092 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593721548049360