Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20lactis_20[genbank_20GCA_5F002151565.1_202017-05-19] 7 sequences; 10,682,662 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq5 102 7e-17 seq4 95.1 1e-14 >seq5 Length=2217437 Score = 102 bits (112), Expect = 7e-17 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 20972 ATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTG 21031 ||| |||||||| |||||||| ||||||||||| | || |||| | | || |||| ||| Sbjct 74983 ATGTAAAGTGGATTCCTTTTGGATGTTATAGTCAGACAAGGTTCTGCCATCTTCCAACTG 75042 Query 21032 TTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTT 21091 || || ||| |||| | ||| || ||||| || | ||||| ||||| ||||| Sbjct 75043 CTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAGGAATACCTTCTTTGTCTTGAATCTT 75102 Query 21092 TTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGT 21151 || || | ||| || ||| | || ||||| || |||||||| ||||| Sbjct 75103 AGACTTGACGTTATCGATGGTGTCAGAAGATTCAACTTCCAAAGTGATGGTCTTACCGGT 75162 Query 21152 TAACGTTTTGACAAATATTTGCAT 21175 ||| |||||||| || |||||||| Sbjct 75163 TAAGGTTTTGACGAAAATTTGCAT 75186 Score = 98.7 bits (108), Expect = 8e-16 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 20972 ATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTG 21031 |||||||||||| || ||||| ||||||||||| | || |||| | | || |||| ||| Sbjct 75211 ATGCAAAGTGGATTCTTTTTGGATGTTATAGTCAGACAAGGTTCTGCCATCTTCCAACTG 75270 Query 21032 TTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTT 21091 || || ||| |||| | ||| || ||||| || | ||||| ||||| ||||| Sbjct 75271 CTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAGGGATACCTTCTTTGTCTTGAATCTT 75330 Query 21092 TTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGT 21151 |||||| | ||| || || | || ||||| || |||||||| || || Sbjct 75331 CGATTTCACGTTATCGATGGTGTCGGAAGATTCGACTTCCAAAGTGATGGTCTTACCAGT 75390 Query 21152 TAACGTTTTGACAAATATTTGCAT 21175 || |||||||| || |||||||| Sbjct 75391 CAAGGTTTTGACGAAAATTTGCAT 75414 Score = 95.1 bits (104), Expect = 1e-14 Identities = 145/207 (70%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 20972 ATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTG 21031 ||| |||||||| |||||||| ||||||||||| | || |||| | | || |||| ||| Sbjct 75895 ATGTAAAGTGGATTCCTTTTGGATGTTATAGTCAGACAAGGTTCTGCCATCTTCCAACTG 75954 Query 21032 TTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTT 21091 || || ||| |||| | ||| || ||||| || | ||||| ||||| ||||| Sbjct 75955 CTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAGGGATACCTTCTTTGTCTTGAATCTT 76014 Query 21092 TTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGT 21151 |||||| | ||| || ||| | || ||||| || || ||||| || || Sbjct 76015 CGATTTCACGTTATCGATGGTGTCAGAAGATTCAACTTCCAAAGTGATAGTCTTACCAGT 76074 Query 21152 TAACGTTTTGACAAATATTTGCATTTT 21178 ||| || || || || |||||||| || Sbjct 76075 TAAAGTCTTAACGAAAATTTGCATGTT 76101 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 20972 ATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTG 21031 |||||||||||| || ||||| ||||| || || | || |||| | || |||| ||| Sbjct 75667 ATGCAAAGTGGATTCTTTTTGGATGTTGTAATCGGACAAGGTTCTTCCATCTTCCAACTG 75726 Query 21032 TTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTT 21091 || || ||| |||| | ||| || ||||| || | ||||| ||||| ||||| Sbjct 75727 CTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAGGGATACCTTCTTTGTCTTGAATCTT 75786 Query 21092 TTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGT 21151 |||||| | ||| || || | || ||||| || |||||||| || || Sbjct 75787 CGATTTCACGTTATCGATGGTGTCGGAAGATTCGACTTCCAAAGTGATGGTCTTACCAGT 75846 Query 21152 TAACGTTTTGACAAATATTTGCAT 21175 || |||||||| || |||||||| Sbjct 75847 CAAGGTTTTGACGAAAATTTGCAT 75870 >seq4 Length=1700866 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || |||| || || | |||| ||||||||||| |||||||| ||||| ||||| | | Sbjct 1531096 CCACCTCTCAATCTCAAGACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCGGAC 1531037 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 | ||| | || |||| || || || ||| | || | ||| || ||||| || Sbjct 1531036 AAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGAGGA 1530977 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||||||||| |||||| || || | | | | || || | || | Sbjct 1530976 ATACCTTCCTTGTCTTGGATCTTAGACTTAACATTGTCAATGGTGTCGGAAGATTCGACT 1530917 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| |||||||||||| || ||||| |||||||| || |||||||| Sbjct 1530916 TCCAAGGTAATGGTCTTACCTGTTAAGGTTTTGACGAAAATTTGCAT 1530870 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422259163976012