Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20lactis_20[genbank_20GCA_5F002151565.1_202017-05-19]
7 sequences; 10,682,662 total letters
Query= NC_001875.2
Length=131995
Score E
Sequences producing significant alignments: (Bits) Value
seq5 102 7e-17
seq4 95.1 1e-14
>seq5
Length=2217437
Score = 102 bits (112), Expect = 7e-17
Identities = 145/204 (71%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 20972 ATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTG 21031
||| |||||||| |||||||| ||||||||||| | || |||| | | || |||| |||
Sbjct 74983 ATGTAAAGTGGATTCCTTTTGGATGTTATAGTCAGACAAGGTTCTGCCATCTTCCAACTG 75042
Query 21032 TTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTT 21091
|| || ||| |||| | ||| || ||||| || | ||||| ||||| |||||
Sbjct 75043 CTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAGGAATACCTTCTTTGTCTTGAATCTT 75102
Query 21092 TTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGT 21151
|| || | ||| || ||| | || ||||| || |||||||| |||||
Sbjct 75103 AGACTTGACGTTATCGATGGTGTCAGAAGATTCAACTTCCAAAGTGATGGTCTTACCGGT 75162
Query 21152 TAACGTTTTGACAAATATTTGCAT 21175
||| |||||||| || ||||||||
Sbjct 75163 TAAGGTTTTGACGAAAATTTGCAT 75186
Score = 98.7 bits (108), Expect = 8e-16
Identities = 144/204 (71%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 20972 ATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTG 21031
|||||||||||| || ||||| ||||||||||| | || |||| | | || |||| |||
Sbjct 75211 ATGCAAAGTGGATTCTTTTTGGATGTTATAGTCAGACAAGGTTCTGCCATCTTCCAACTG 75270
Query 21032 TTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTT 21091
|| || ||| |||| | ||| || ||||| || | ||||| ||||| |||||
Sbjct 75271 CTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAGGGATACCTTCTTTGTCTTGAATCTT 75330
Query 21092 TTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGT 21151
|||||| | ||| || || | || ||||| || |||||||| || ||
Sbjct 75331 CGATTTCACGTTATCGATGGTGTCGGAAGATTCGACTTCCAAAGTGATGGTCTTACCAGT 75390
Query 21152 TAACGTTTTGACAAATATTTGCAT 21175
|| |||||||| || ||||||||
Sbjct 75391 CAAGGTTTTGACGAAAATTTGCAT 75414
Score = 95.1 bits (104), Expect = 1e-14
Identities = 145/207 (70%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 20972 ATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTG 21031
||| |||||||| |||||||| ||||||||||| | || |||| | | || |||| |||
Sbjct 75895 ATGTAAAGTGGATTCCTTTTGGATGTTATAGTCAGACAAGGTTCTGCCATCTTCCAACTG 75954
Query 21032 TTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTT 21091
|| || ||| |||| | ||| || ||||| || | ||||| ||||| |||||
Sbjct 75955 CTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAGGGATACCTTCTTTGTCTTGAATCTT 76014
Query 21092 TTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGT 21151
|||||| | ||| || ||| | || ||||| || || ||||| || ||
Sbjct 76015 CGATTTCACGTTATCGATGGTGTCAGAAGATTCAACTTCCAAAGTGATAGTCTTACCAGT 76074
Query 21152 TAACGTTTTGACAAATATTTGCATTTT 21178
||| || || || || |||||||| ||
Sbjct 76075 TAAAGTCTTAACGAAAATTTGCATGTT 76101
Score = 84.2 bits (92), Expect = 2e-11
Identities = 141/204 (69%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 20972 ATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTG 21031
|||||||||||| || ||||| ||||| || || | || |||| | || |||| |||
Sbjct 75667 ATGCAAAGTGGATTCTTTTTGGATGTTGTAATCGGACAAGGTTCTTCCATCTTCCAACTG 75726
Query 21032 TTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTT 21091
|| || ||| |||| | ||| || ||||| || | ||||| ||||| |||||
Sbjct 75727 CTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAGGGATACCTTCTTTGTCTTGAATCTT 75786
Query 21092 TTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGT 21151
|||||| | ||| || || | || ||||| || |||||||| || ||
Sbjct 75787 CGATTTCACGTTATCGATGGTGTCGGAAGATTCGACTTCCAAAGTGATGGTCTTACCAGT 75846
Query 21152 TAACGTTTTGACAAATATTTGCAT 21175
|| |||||||| || ||||||||
Sbjct 75847 CAAGGTTTTGACGAAAATTTGCAT 75870
>seq4
Length=1700866
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| |||| || || | |||| ||||||||||| |||||||| ||||| ||||| | |
Sbjct 1531096 CCACCTCTCAATCTCAAGACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCGGAC 1531037
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
| ||| | || |||| || || || ||| | || | ||| || ||||| ||
Sbjct 1531036 AAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGAGGA 1530977
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| ||||||||||| |||||| || || | | | | || || | || |
Sbjct 1530976 ATACCTTCCTTGTCTTGGATCTTAGACTTAACATTGTCAATGGTGTCGGAAGATTCGACT 1530917
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|||| |||||||||||| || ||||| |||||||| || ||||||||
Sbjct 1530916 TCCAAGGTAATGGTCTTACCTGTTAAGGTTTTGACGAAAATTTGCAT 1530870
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 422259163976012
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |