Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20lactis_20[genbank_20GCA_5F002151565.1_202017-05-19]
7 sequences; 10,682,662 total letters
Query= NC_003027.1
Length=150773
Score E
Sequences producing significant alignments: (Bits) Value
seq6 170 2e-37
>seq6
Length=2601250
Score = 170 bits (188), Expect = 2e-37
Identities = 534/813 (66%), Gaps = 27/813 (3%)
Strand=Plus/Minus
Query 13928 ACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTTTCCATAAAATCAAAT 13987
||||| ||||| || ||||| || ||||| ||| || ||||||||||| ||||| |||
Sbjct 1394635 ACTCTCTTTTCGAAAAAGTTGGTCTTACCAGCCAAGGAGATATTTTCCATGAAATCGAAT 1394576
Query 13988 GGATTTGTTGACAT--AAACACTTTATCACAACCTAGTTCTAATAGTAATCTATCCGCAA 14045
|| || || ||||| ||| | || | | || || | | | |||||| || || |
Sbjct 1394575 GGGTTGGT-GACATTGAAATATTTCTTGTTACCCAAGG-CGACCAATAATCTGTCGGCGA 1394518
Query 14046 TGAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGTTTTACAGGAATTA 14105
|| || | ||||| |||||| || |||||||| | ||| || || |
Sbjct 1394517 CAAATTCCACGTATTGGTTCATTAAGTCTGCGTTCATACCCAATAGAGAAACGGGTAGAG 1394458
Query 14106 TATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAATAATCGTA---ATAA 14162
|| | || || ||||| || ||||| || | |||| ||| | | ||
Sbjct 1394457 CATCCATGAAGTATCTCTTTTCAATTTCGACAGCTTC---TGTAATGATCTTTTCCACAA 1394401
Query 14163 TTTCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCAAAATCACAATGAA 14222
|||| | || || || | ||| ||| | || ||| ||||| || ||| |
Sbjct 1394400 TTTCTGGATTTGGTTTATTCTTCAAATGGGCAAAGAGTAGACAGGCAAAGTCTGTATGTA 1394341
Query 14223 GGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtt 14282
| || |||||||||| || | ||||| || || || || || ||||| || || |
Sbjct 1394340 GACCTTCATCTCTACAGATCAACTCGTTAGAGAAAGTCAAACCAGGCATTAACCCCTTCT 1394281
Query 14283 tttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAA 14342
| || ||||| || || ||||| || || ||||| ||||| | || || || ||||| |
Sbjct 1394280 TCTTCAACCAGAAGATAGCAGCAAAGGAACCGGAGAAGAACACACCTTCCACAGCAGCGA 1394221
Query 14343 ACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGT-TCGATATCCATTTTCTAGCCCAT 14401
| || | |||| ||| |||||| | || | | | | || |||||| | ||||||||
Sbjct 1394220 AAGCAACCAATCTTTCACCAAACAAGGCATCATCATCTTGA-ATCCATCTGATAGCCCAT 1394162
Query 14402 TCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAATGTTC-CTTCTC 14460
|||| |||| |||||| || ||||| |||||||| || ||| || ||| |
Sbjct 1394161 TCAGCCTTTTCTTTAATTTGTGGGATAGTTTCGATAGCATTGAACAAAAACTCACTTTCC 1394102
Query 14461 TTTAG-TACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTT 14519
||| | | ||| ||| || |||||||| | ||| ||| | || || || || || |
Sbjct 1394101 TTTGGATCCTT--AATATAGGTATCAATCAACAAGGAATAAGTCTCTGAATGGATATTCT 1394044
Query 14520 CCATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGTACCTCTGAGTAAA 14579
|||| || || || ||||| |||||| | ||||||| ||| || || | | |
Sbjct 1394043 CCATCATAATTTGGAACCCATAGAAACATTTCGCTTCTGGTGCTTGCACTTCAGCTGAGA 1393984
Query 14580 ATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCAATAT-- 14637
| | || |||| ||||| ||||| |||||||| || || || || ||||| ||
Sbjct 1393983 AGTTCTCCACCAAGTTTTCGTTAACGATACCATCCGAGGCAGCGAAGAACGCCAAAATTC 1393924
Query 14638 --GTTTTTAATAAAGTATTGCTC---TTCATTGCTGAGTTTTTTCCAATCGGCTAAATCC 14692
| | || || | | | || |||||| ||| || ||||||||| ||||||
Sbjct 1393923 TAGAGATAAAAAACCTTTCGTTCTCATTCATT-CTG---TTGTTCCAATCGTGCAAATCC 1393868
Query 14693 TTAGAAAGATCTACTTCATCAACTGTCCAAAAA 14725
|| || | ||| | ||| || | ||||| |||
Sbjct 1393867 TTGGACAAATCGATTTCTTCTGCAGTCCAGAAA 1393835
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 482345557794760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |