Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20lactis_20[genbank_20GCA_5F002151565.1_202017-05-19]
7 sequences; 10,682,662 total letters
Query= NC_003389.1
Length=146454
Score E
Sequences producing significant alignments: (Bits) Value
seq3 187 2e-42
seq6 131 2e-25
>seq3
Length=1752996
Score = 187 bits (206), Expect = 2e-42
Identities = 367/541 (68%), Gaps = 4/541 (1%)
Strand=Plus/Plus
Query 38011 TTTTCTACGCGTTCCATAAATAAATCAGGTACCCATAATGCAGTAAATAAATCTTTGGTT 38070
||||| || | | ||| || |||||||| | ||| ||||||| ||||||||| | |
Sbjct 676661 TTTTCCACTCTCTTCATGAACAAATCAGGAATCCACAATGCAGGGAATAAATCTCTAGCA 676720
Query 38071 CTATATTCTTCGTTCCCTACATTCTTTCTTAAGCTTAGAAAATCGAATATATCAGCGTGC 38130
| | |||||| || || |||||| || | | |||||||| ||||||| |||
Sbjct 676721 CGAATTTCTTCCTTTCCATGATTCTTCCTGATATCAATGAAATCGAAGATATCAGAATGC 676780
Query 38131 CATGGTTC--TATATAAATCGACATTGCTCCTGGTCTTTTATCACCTCCCTGATTAATAT 38188
|||||||| | |||||| || | || |||||||| || | ||| || || | || |
Sbjct 676781 CATGGTTCAATGTATAAAGCG--AAGGCACCTGGTCTCTTGTTACCACCTTGGTCAACGT 676838
Query 38189 ATCTAACTGTGTTATTATATATTCTTAACATAGGTACTATACCATTAGATTTGCCGTTTA 38248
| | | | ||||| || | | | | ||| || | ||||||||||| | |||||
Sbjct 676839 AACGAGCAGTGTTGTTGAAGACACGGATCATTGGAATGATACCATTAGAAGTTCCGTTGG 676898
Query 38249 TACCGGATATATAAGTACCCTTAGCTCGTATATTACTTATCGACAATCCTATTCCACCTG 38308
|||| | || |||| ||| ||| || || || || ||| || || ||||| |
Sbjct 676899 TACCAGCAATGTAAGAACCAGTAGAACGGATGTTGTGAATGTGCAACCCAATACCACCAG 676958
Query 38309 CATGTTTTGATATTAAAGCGCATTGTTTTAACGTATCAAATATACCTTCTATACTGTCAT 38368
|| ||||| || | ||| |||| || || ||||| | |||||||| || || |
Sbjct 676959 CAGTCTTTGAGATCATAGCACATTCCTTCAAGGTATCGTAAATACCTTCGATGGAATCCT 677018
Query 38369 CCTTTATTGGTAGTATAAAACAACTAGACATTTGAGGCAATGGAGTTCCGGCGTTAAATA 38428
| || || | | | |||||| ||||||||||| ||||| || ||||| || |
Sbjct 677019 CTTTCATAGCAACCAAGAAACAAGATGACATTTGAGGATGAGGAGTACCAGCGTTGAACA 677078
Query 38429 ATGTAGGAGATGCATGTATGAACCATTTTTCCGACAAATAATTATATGTTTCTATTACAT 38488
|||||||||| || || |||| || ||| |||| || || || |||| |||
Sbjct 677079 ATGTAGGAGAAGCGTGGGTGAAATATCTTTGAGACATTAGGTTGTAAGTCTCTAATACTC 677138
Query 38489 CATCTATATCACCGCCGTGAATACCTAGAGATACCCTCATTAGCATATGTTGTGGTCTTT 38548
|||||||| ||||||||||| | || || ||||| | ||| |||||||| | ||
Sbjct 677139 GTTCTATATCGTTACCGTGAATACCAACAGCCACTCTCATAATCATGTGTTGTGGACGTT 677198
Query 38549 C 38549
|
Sbjct 677199 C 677199
Score = 104 bits (114), Expect = 2e-17
Identities = 489/767 (64%), Gaps = 21/767 (3%)
Strand=Plus/Plus
Query 36814 GATGCCGATTTTGTTCTCATATAATACATTCCAGTTTTTAGCCCCAATCTCCATCCGTAA 36873
||||| | || |||||| | || ||||| ||||| || | ||| | ||||||||||
Sbjct 675443 GATGCAGCTTGTGTTCTTAGGTAGTACATACCAGTCTTCAAACCCTTTTTCCATCCGTAG 675502
Query 36874 AAATGCATACTGGTCAGTT---TTGCGTATG-TAGGATTATCTATATATATTGTCATTGA 36929
|||||||| | |||| || | ||| | || | |||| || | | ||
Sbjct 675503 AAATGCAT----GGAAGTTAACTTACCCATGGTTGGTGCACGAATATGGATATTTAAGGA 675558
Query 36930 TTGACTTTGATCTATAAACGCACCTCTGTCGGCTGCCATTTCTAAAATACATTTTTGAGA 36989
|||| |||||| || | ||| | | |||||| ||||| || | |||| ||||||||
Sbjct 675559 TTGAGATTGATCAATGTAAGCAGCACGGTCGGCCGCCATGTCGATAATATGCTTTTGAGA 675618
Query 36990 TATCTCCCAAACCGTTTTATATATTTGTTTTATATTATCTGGTAAATCT---AAATGTTG 37046
| |||||||| || || |||| | || | | | ||| | || | || | ||
Sbjct 675619 CAATTCCCAAACAGTCTTGTATAGGTCCTTCAATTCTTGTGGGATATTTGGTAAGTTCTG 675678
Query 37047 AATAGAACCATTAT--GTAACACAATTGTATTCTTTATGTCATTATTCCACATATTTCTA 37104
||| |||||||| | | || | || ||| | || | | || ||| ||| | |
Sbjct 675679 AATGGAACCATTGTCGGCAATAATATGAGATT--TCATAGCTTCATCCCAAATACC-CAA 675735
Query 37105 CTTATT-AGTTCTCTCAATAGGTGTGGATTTACAACCTGAAAATCTCCAGATAATACTCT 37163
| | | || ||||| || ||| || |||| || || || ||||| || || |
Sbjct 675736 GTCAACCAAGTCATGCAATAAGTATGGGTTGACAATTTGGAACTCACCAGACAAAACACG 675795
Query 37164 TCTTGTATATATATTGCTAGTATATGGTTCAATGGACTCATTATTACTTAATATTTGAGA 37223
| | || || ||| || |||||||||| | || || | || || ||||||||
Sbjct 675796 ACGAGAGTACATGTTGGATGTGTATGGTTCAAAACATTCGTTGTAACCCAAAATTTGAGA 675855
Query 37224 TGTAGATGCAGTAGGCATTGGTGCTATTAGAAGGCTATTTCTCAATCCATGTGTATTAAT 37283
||| ||||| || |||||||| || | | | ||||||| |||| || ||
Sbjct 675856 TGTGGATGCTGTTGGCATTGGAGCAACCAACAATGAGTTTCTCATACCATTCAACTTGAT 675915
Query 37284 T--CTCTTTTTTAGTTCATTCCAATCCCATAAATCTGTTGGGTTCTTTAACCACATATCA 37341
| ||||| ||| |||||| ||||||| | | ||||| |||| ||| | |||
Sbjct 675916 TTGTTCTTTCAAAGT--ATTCCAGTCCCATAGAGCAGTTGGTGTCTTACCCCATAAATCG 675973
Query 37342 TATTGTAGAATACCTTTACTCGCTGGAGAATCGTTATATGTCTCATAAGGTCCGTAAATT 37401
|||| | ||||| | || |||||| | |||| |||||| | || | |
Sbjct 675974 AATTGCAATTGACCTTGAGATGCAGGAGAACCTGGGAATGTTTCATAATGGCCTTCTTCT 676033
Query 37402 TTAGCTAGTTCGCAACTAGATTCTAGTGCGGCATAATATATTGTTTCGAAAATTTGTATA 37461
|| || | ||| || ||| || ||| || || |||||||| |||| ||
Sbjct 676034 TTGGCCAATTCCATGGAAGCTTCGCAGGCACCATGGTAAATGGTTTCGAAGATTTCAATG 676093
Query 37462 TTTAATATTTTTGCTTCTTCGCTATCGAATGCATAGCCCAATAATATAAACACATCAGCC 37521
|| | | | || |||||||| ||| |||| | | ||| | ||||| | || ||
Sbjct 676094 TTCAGTTTCTTAGCTTCTTCAGAATCAAATGGCAAACGCAACATCATAAAAGCGTCGGCT 676153
Query 37522 AAACCCTGAACACCGATACCTATGGGTCTATGTTTCTTATTAGATCT 37568
| ||| || ||||| | | | || ||||| ||| || | || |||||
Sbjct 676154 AGACCTTGGACACCCAAAGCAATAGGTCTGTGTCTCATGTTCGATCT 676200
>seq6
Length=2601250
Score = 131 bits (144), Expect = 2e-25
Identities = 395/606 (65%), Gaps = 8/606 (1%)
Strand=Plus/Minus
Query 11612 AAATGTTTAAACATTAAACACGCAAAATCACAATGTAAACCTTCGTCTCTACTTATTAGT 11671
||||| ||| | || ||| ||||| || ||||| |||||| ||||||| || |
Sbjct 1394377 AAATGGGCAAAGAGTAGACAGGCAAAGTCTGTATGTAGACCTTCATCTCTACAGATCAAC 1394318
Query 11672 TCATTAGAAAATGTTAATCCGGGCATCAATCCTCGtttttttATCCAAAATATAGCAGCA 11731
|| ||||| || || || || ||||| || || || || | ||| || |||||||||
Sbjct 1394317 TCGTTAGAGAAAGTCAAACCAGGCATTAACCCCTTCTTCTTCAACCAGAAGATAGCAGCA 1394258
Query 11732 AATGAACCAGAAAAGAATATTCCCTCCACAGCTGCAAATGCTACTACTCTTTCTCCATAT 11791
|| ||||| || ||||| | || |||||||| || || || || | |||||| ||| |
Sbjct 1394257 AAGGAACCGGAGAAGAACACACCTTCCACAGCAGCGAAAGCAACCAATCTTTCACCAAAC 1394198
Query 11792 A---CCTTGT-TGCTAGATATCCATTTTCTGGCCCAATCAGCTTTCTTTTTTACGCATTC 11847
| | | | || || |||||| | | ||||| ||||| || | ||| | |
Sbjct 1394197 AAGGCATCATCATCTTGA-ATCCATCTGATAGCCCATTCAGCCTTTTCTTTAATTTGTGG 1394139
Query 11848 CATTGTTTCTATAGCGTTAAATAAATGCATTTTTTCTATATTATCTCTTACATATGTATC 11907
|| ||||| ||||| || || ||| | |||| | ||| | | ||| |||||
Sbjct 1394138 GATAGTTTCGATAGCATTGAACAAAAACTCACTTTCCTTTGGATCCTTAATATAGGTATC 1394079
Query 11908 TATTAATAAACTATACATTTCTGAATGAATATTTTCCATAGCTATTTGAAATCCATAGAA 11967
|| || || ||| | |||||||| ||||| ||||| ||||| || ||||||||
Sbjct 1394078 AATCAACAAGGAATAAGTCTCTGAATGGATATTCTCCATCATAATTTGGAACCCATAGAA 1394019
Query 11968 ACATCGTGCCTCTGAACACTGTACATCCACATAAAATCTTTCCGCTAAATTCTCATTTAC 12027
|||| || |||| || || || | | || | ||| | || || || || ||
Sbjct 1394018 ACATTTCGCTTCTGGTGCTTGCACTTCAGCTGAGAAGTTCTCCACCAAGTTTTCGTTAAC 1393959
Query 12028 AATACCATCACTAGATGCAAAAAATGCTAGTATATGTTTTATAAAGTATTTTTCG---TC 12084
|||||||| | || || || || | || ||||| | ||||| ||
Sbjct 1393958 GATACCATCCGAGGCAGCGAAGAACGCCAAAATTCTAGAGATAAAAAACCTTTCGTTCTC 1393899
Query 12085 TTTAGTTAATTTATCCCAATCATCTAAATCTTTTGATAAATCTACTTCTTCAACGGTCCA 12144
|| || || | |||||| | ||||| || || ||||| | |||||| | |||||
Sbjct 1393898 ATTCATTCTGTTGTTCCAATCGTGCAAATCCTTGGACAAATCGATTTCTTCTGCAGTCCA 1393839
Query 12145 AAAACTTGCCACTGATTGTTTATACATTTTCCAGATATCATGATACTTAATAGGGAAAAT 12204
||| || | | ||||| || ||| || ||||| ||||| || ||||| |
Sbjct 1393838 GAAAGACGCTTCGGCCCTCTTATATGCTTCCCAAATCTCATGGTACTTGATTGGGAAGAG 1393779
Query 12205 AACGAA 12210
||| ||
Sbjct 1393778 AACAAA 1393773
Score = 122 bits (134), Expect = 8e-23
Identities = 199/287 (69%), Gaps = 0/287 (0%)
Strand=Plus/Minus
Query 37996 GACCATTCTTCATCTTTTTCTACGCGTTCCATAAATAAATCAGGTACCCATAATGCAGTA 38055
||||| ||||||| || || || || | |||||| | |||||||| ||| | ||| |
Sbjct 110378 GACCAGTCTTCATTATTCTCAACCCGCTTCATAAAGAGATCAGGTATCCAGAGGGCATAA 110319
Query 38056 AATAAATCTTTGGTTCTATATTCTTCGTTCCCTACATTCTTTCTTAAGCTTAGAAAATCG 38115
|| |||||| | | || ||| || || || ||||||||| | | || ||
Sbjct 110318 AACAAATCTCTTGCCCTCATTTCCTCTTTGCCATGATTCTTTCTCAGTTGCAAGAAGTCA 110259
Query 38116 AATATATCAGCGTGCCATGGTTCTATATAAATCGACATTGCTCCTGGTCTTTTATCACCT 38175
| ||| || || ||||| || || | ||| || | | ||||||||||||||||| ||
Sbjct 110258 ATTATGTCTGCATGCCAGGGCTCCAAATATATACAGAATGCTCCTGGTCTTTTATTTCCA 110199
Query 38176 CCCTGATTAATATATCTAACTGTGTTATTATATATTCTTAACATAGGTACTATACCATTA 38235
|| |||| || ||| || | |||||||| | | |||||||| || || | |||||
Sbjct 110198 CCTTGATCAACATACCTGGCAGTGTTATTGAAAACCCTTAACATTGGCACAAGGCCATTG 110139
Query 38236 GATTTGCCGTTTATACCGGATATATAAGTACCCTTAGCTCGTATATT 38282
||| | ||||| ||| || ||||| | || || || || |||||
Sbjct 110138 GATGTTCCGTTGGAACCTGAGATATATGCTCCATTTGCACGGATATT 110092
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 468524759004080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |