Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20lactis_20[genbank_20GCA_5F002151565.1_202017-05-19]
7 sequences; 10,682,662 total letters
Query= NC_004003.1
Length=149599
Score E
Sequences producing significant alignments: (Bits) Value
seq6 192 6e-44
>seq6
Length=2601250
Score = 192 bits (212), Expect = 6e-44
Identities = 535/809 (66%), Gaps = 19/809 (2%)
Strand=Plus/Minus
Query 13384 ACTCTTTTTTCAAAAAAGTTAGTTTTACCTTCCAGTGATATATTTTCCATAAAATCGAAT 13443
||||| ||||| |||||||| || ||||| ||| || ||||||||||| |||||||||
Sbjct 1394635 ACTCTCTTTTCGAAAAAGTTGGTCTTACCAGCCAAGGAGATATTTTCCATGAAATCGAAT 1394576
Query 13444 GGATTTGTTGACAT--AAACACTTTATCACAACCTAGTTCTAATAATAATCTATCAGCAA 13501
|| || || ||||| ||| | || | | || || | | |||||||| || || |
Sbjct 1394575 GGGTTGGT-GACATTGAAATATTTCTTGTTACCCAAGG-CGACCAATAATCTGTCGGCGA 1394518
Query 13502 TAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGTTTTACAGGAATTA 13561
||| || | ||||| |||||| || |||||||| | ||| || || |
Sbjct 1394517 CAAATTCCACGTATTGGTTCATTAAGTCTGCGTTCATACCCAATAGAGAAACGGGTAGAG 1394458
Query 13562 TATTAGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAATAATCTTA---ATAA 13618
|| | || || ||||| || ||||| || | |||| ||||| | ||
Sbjct 1394457 CATCCATGAAGTATCTCTTTTCAATTTCGACAGCTTC---TGTAATGATCTTTTCCACAA 1394401
Query 13619 TGTCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCAAAATCACAATGAA 13678
| || | || || || | ||| ||| | || ||| ||||| || ||| |
Sbjct 1394400 TTTCTGGATTTGGTTTATTCTTCAAATGGGCAAAGAGTAGACAGGCAAAGTCTGTATGTA 1394341
Query 13679 GGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtt 13738
| || |||||||||| || | ||||| || || || || || ||||| || || |
Sbjct 1394340 GACCTTCATCTCTACAGATCAACTCGTTAGAGAAAGTCAAACCAGGCATTAACCCCTTCT 1394281
Query 13739 tttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAA 13798
| || ||||| || || ||||| || || ||||| ||||| | || || || ||||| |
Sbjct 1394280 TCTTCAACCAGAAGATAGCAGCAAAGGAACCGGAGAAGAACACACCTTCCACAGCAGCGA 1394221
Query 13799 ACGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGT-TTGATATCCATTTTCTAGCCCAT 13857
| || | | || ||| |||||| | || | | | |||| |||||| | ||||||||
Sbjct 1394220 AAGCAACCAATCTTTCACCAAACAAGGCATCATCATCTTGA-ATCCATCTGATAGCCCAT 1394162
Query 13858 TCAGAtttttttttAATAAAATCCATTGTTTCGATTGCATTGAATAAATGTTC-CTTCTC 13916
|||| |||| |||||| || |||||||| |||||||| ||| || ||| |
Sbjct 1394161 TCAGCCTTTTCTTTAATTTGTGGGATAGTTTCGATAGCATTGAACAAAAACTCACTTTCC 1394102
Query 13917 TTTAG-TACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTT 13975
||| | | ||| ||| || |||||||| | ||| ||| | || || || || || |
Sbjct 1394101 TTTGGATCCTT--AATATAGGTATCAATCAACAAGGAATAAGTCTCTGAATGGATATTCT 1394044
Query 13976 CTATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGTACCTCCGAGTAAA 14035
| || || || || ||||| |||||| | ||||||| ||| || || | | |
Sbjct 1394043 CCATCATAATTTGGAACCCATAGAAACATTTCGCTTCTGGTGCTTGCACTTCAGCTGAGA 1393984
Query 14036 ATCTTTCTGCCAAGTTTTCATTAACAATACCATCACTAGCTGCAAAAAATGCCAATATGT 14095
| | || |||||||||| ||||| |||||||| || || || || ||||| ||
Sbjct 1393983 AGTTCTCCACCAAGTTTTCGTTAACGATACCATCCGAGGCAGCGAAGAACGCCAAAATTC 1393924
Query 14096 T---TTTAATAAAGTATTGCTCTTCATTGTTGAGTTTTTTCCAATCGGCTAAATCCTTAG 14152
| ||| ||| || | ||||| | || ||||||||| |||||||| |
Sbjct 1393923 TAGAGATAAAAAACCTTTCGTTCTCATTCATTCTGTTGTTCCAATCGTGCAAATCCTTGG 1393864
Query 14153 AAAGATCTACTTCATCAACTGTCCAAAAA 14181
| | ||| | ||| || | ||||| |||
Sbjct 1393863 ACAAATCGATTTCTTCTGCAGTCCAGAAA 1393835
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478588758123480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |