Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20lactis_20[genbank_20GCA_5F002151565.1_202017-05-19]
7 sequences; 10,682,662 total letters
Query= NC_004117.1
Length=158482
Score E
Sequences producing significant alignments: (Bits) Value
seq6 114 1e-20
seq5 114 1e-20
>seq6
Length=2601250
Score = 114 bits (126), Expect = 1e-20
Identities = 278/410 (68%), Gaps = 17/410 (4%)
Strand=Plus/Plus
Query 50437 GTTGAAGGTGTGtttttttCCGGTAGCTTTGCAGCCATATTTTACATTAAAACCTTAGGC 50496
|| ||||||||||| || |||||| |||||| || || || | | || | ||
Sbjct 1394229 GTGGAAGGTGTGTTCTTCTCCGGTTCCTTTGCTGCTATCTTCTGGTTGAAGAAGAAGGGG 1394288
Query 50497 ATAATGCCCGGCCTCACGTTTAGCAACGAGTTGATTTCGCGCGACGAAGGAATGCACACA 50556
||||||| || | || || ||||||||||| | | || ||||| | || |||
Sbjct 1394289 TTAATGCCTGGTTTGACTTTCTCTAACGAGTTGATCTGTAGAGATGAAGGTCTACATACA 1394348
Query 50557 GACTTTGCGTGTTTGTACTACAATACGCGCGTAAATGAAAAATTATC-ATACGAAACAAT 50615
|||||||| ||| |||| | || | | |||| ||| | | | | | |||
Sbjct 1394349 GACTTTGCCTGT-----CTACTCTTTGCCCATT--TGAAGAATAAACCAAATCCAGAAAT 1394401
Query 50616 TTTGGACATGTTCAA---AGAAGCCGTCGACATCGAAAAAGAGTTT-TTCACGGACGCTT 50671
| |||| | | ||| |||||| ||||| || ||||| ||| | |||| ||| |||
Sbjct 1394402 TGTGGAAAAGATCATTACAGAAGCTGTCGAAATTGAAAA-GAGATACTTCATGGATGCTC 1394460
Query 50672 TACCCGTGGCATTGTTGGGCATGAACGCAGACATGATGTGCGAGTACATTGAGTTTGTTG 50731
||||||| | | ||||| |||||||||||| | ||| | | ||| | || ||||| |
Sbjct 1394461 TACCCGTTTCTCTATTGGGTATGAACGCAGACTTAATGAACCAATACGTGGAATTTGTCG 1394520
Query 50732 CAGACAGATTGTTGTTGCAGCTGGGACAAC-CGAAATACTATAATG-CACGTAACCCCTT 50789
| |||||||| ||| | | || || ||| |||||| | |||| ||| ||||| ||
Sbjct 1394521 CCGACAGATTATTGGT-CGCCTTGGGTAACAAGAAATATTTCAATGTCAC-CAACCCATT 1394578
Query 50790 TCCGTTTATGAATAACATATCGTTGGAGGGCAAAACAAACTTTTTCGAAA 50839
|| ||| | || || || |||| || || || |||||||||||||
Sbjct 1394579 CGATTTCATGGAAAATATCTCCTTGGCTGGTAAGACCAACTTTTTCGAAA 1394628
>seq5
Length=2217437
Score = 114 bits (126), Expect = 1e-20
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017
|| |||| ||| | |||||| | ||| | || ||||||||||| |||||||||||| |
Sbjct 75644 CCACCTCTTAATCTCAAAACAAGATGCAAAGTGGATTCTTTTTGGATGTTGTAATCGGAC 75703
Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077
| || || ||||| | || ||||| ||| | || | | ||| || || |||||
Sbjct 75704 AAGGTTCTTCCATCTTCCAACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAGGG 75763
Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137
|| ||||||||||| ||| || ||| | | || | ||||| | | ||| |||
Sbjct 75764 ATACCTTCTTTGTCTTGAATCTTCGATTTCACGTTATCGATGGTGTCGGAAGATTCGACT 75823
Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185
|| | ||| | ||||| || ||||| ||||| ||||| |||||||||
Sbjct 75824 TCCAAAGTGATGGTCTTACCAGTCAAGGTTTTGACGAAAATTTGCATA 75871
Score = 100 bits (110), Expect = 3e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017
|| |||| ||| | |||||| | ||| | || ||||||||||| ||||| || || |
Sbjct 75188 CCACCTCTTAATCTCAAAACAAGATGCAAAGTGGATTCTTTTTGGATGTTATAGTCAGAC 75247
Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077
| || || ||||| | || ||||| ||| | || | | ||| || || |||||
Sbjct 75248 AAGGTTCTGCCATCTTCCAACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAGGG 75307
Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137
|| ||||||||||| ||| || ||| | | || | ||||| | | ||| |||
Sbjct 75308 ATACCTTCTTTGTCTTGAATCTTCGATTTCACGTTATCGATGGTGTCGGAAGATTCGACT 75367
Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185
|| | ||| | ||||| || ||||| ||||| ||||| |||||||||
Sbjct 75368 TCCAAAGTGATGGTCTTACCAGTCAAGGTTTTGACGAAAATTTGCATA 75415
Score = 89.7 bits (98), Expect = 5e-13
Identities = 157/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 142957 GCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCT 143016
||| |||| ||| | ||| || | ||| | || ||||| ||||| ||||| || ||
Sbjct 74959 GCCACCTCTTAATCTCAAGACAAGATGTAAAGTGGATTCCTTTTGGATGTTATAGTCAGA 75018
Query 143017 CATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 143076
|| || || ||||| | || ||||| ||| | || | | ||| || || |||||
Sbjct 75019 CAAGGTTCTGCCATCTTCCAACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAGG 75078
Query 143077 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTAC 143136
|| ||||||||||| ||| || || | | || | ||||| | | ||| ||
Sbjct 75079 AATACCTTCTTTGTCTTGAATCTTAGACTTGACGTTATCGATGGTGTCAGAAGATTCAAC 75138
Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185
||| | ||| | ||||| ||||| || ||||| ||||| |||||||||
Sbjct 75139 TTCCAAAGTGATGGTCTTACCGGTTAAGGTTTTGACGAAAATTTGCATA 75187
Score = 87.8 bits (96), Expect = 2e-12
Identities = 156/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017
|| |||| ||| | ||| || | ||| | || ||||| ||||| ||||| || || |
Sbjct 75416 CCACCTCTTAATCTCAAGACAAGATGTAAAGTGGATTCCTTTTGGATGTTATAGTCAGAC 75475
Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077
| || || ||||| | || ||||| ||| | || | | ||| || || |||||
Sbjct 75476 AAGGTTCTGCTATCTTCCAACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAGGA 75535
Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137
|| ||||||||||| ||| || || | | || | ||||| | | ||| |||
Sbjct 75536 ATACCTTCTTTGTCTTGAATCTTAGACTTGACGTTATCGATGGTGTCGGAAGATTCGACT 75595
Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185
|| | ||| | ||||| ||||| || ||||| ||||| |||||||||
Sbjct 75596 TCCAAAGTGATGGTCTTACCGGTTAAGGTTTTGACGAAAATTTGCATA 75643
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 507014355636240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |