Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20lactis_20[genbank_20GCA_5F002151565.1_202017-05-19] 7 sequences; 10,682,662 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq4 143 2e-29 seq5 123 2e-23 seq1 116 3e-21 >seq4 Length=1700866 Score = 143 bits (158), Expect = 2e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 |||||||||||||| || || || || | ||||| || ||||| |||||||| ||| Sbjct 1531096 CCACCTCTCAATCTCAAGACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCGGAC 1531037 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 | | |||| | ||||| ||||| || ||||| | ||||| | ||||||||| ||| Sbjct 1531036 AAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGAGGA 1530977 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 || ||||| ||||| || || ||| ||| | || ||||| ||| | ||| || Sbjct 1530976 ATACCTTCCTTGTCTTGGATCTTAGACTTAACATTGTCAATGGTGTCGGAAGATTCGACT 1530917 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 || ||||||||||| |||||||| | ||||| || ||||||||||| Sbjct 1530916 TCCAAGGTAATGGTCTTACCTGTTAAGGTTTTGACGAAAATTTGCAT 1530870 >seq5 Length=2217437 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 |||||||| ||||| ||||| | ||| | ||||| |||||||| |||||||||||| Sbjct 75644 CCACCTCTTAATCTCAAAACAAGATGCAAAGTGGATTCTTTTTGGATGTTGTAATCGGAC 75703 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 | |||| | ||||| || || || || || | || || | ||||||||| || Sbjct 75704 AAGGTTCTTCCATCTTCCAACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAGGG 75763 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 || ||||||||||| ||| || || || | || ||||| ||| | ||| || Sbjct 75764 ATACCTTCTTTGTCTTGAATCTTCGATTTCACGTTATCGATGGTGTCGGAAGATTCGACT 75823 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 || || || ||||| ||||| |||| ||||| || |||||||||||| Sbjct 75824 TCCAAAGTGATGGTCTTACCAGTCAAGGTTTTGACGAAAATTTGCATA 75871 Score = 109 bits (120), Expect = 4e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 |||||||| ||||| ||||| | ||| | ||||| |||||||| ||||| || || Sbjct 75188 CCACCTCTTAATCTCAAAACAAGATGCAAAGTGGATTCTTTTTGGATGTTATAGTCAGAC 75247 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 | |||| | ||||| || || || || || | || || | ||||||||| || Sbjct 75248 AAGGTTCTGCCATCTTCCAACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAGGG 75307 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 || ||||||||||| ||| || || || | || ||||| ||| | ||| || Sbjct 75308 ATACCTTCTTTGTCTTGAATCTTCGATTTCACGTTATCGATGGTGTCGGAAGATTCGACT 75367 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 || || || ||||| ||||| |||| ||||| || |||||||||||| Sbjct 75368 TCCAAAGTGATGGTCTTACCAGTCAAGGTTTTGACGAAAATTTGCATA 75415 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 15135 TGCCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGC 15194 |||||||||| ||||| || || | ||| | ||||| || ||||| ||||| || || Sbjct 74958 TGCCACCTCTTAATCTCAAGACAAGATGTAAAGTGGATTCCTTTTGGATGTTATAGTCAG 75017 Query 15195 TTAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTG 15254 | |||| | ||||| || || || || || | || || | ||||||||| | Sbjct 75018 ACAAGGTTCTGCCATCTTCCAACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAG 75077 Query 15255 GAATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTA 15314 |||| ||||||||||| ||| || ||| || | || ||||| || | ||| | Sbjct 75078 GAATACCTTCTTTGTCTTGAATCTTAGACTTGACGTTATCGATGGTGTCAGAAGATTCAA 75137 Query 15315 CATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 | || || || ||||| ||||| || | ||||| || |||||||||||| Sbjct 75138 CTTCCAAAGTGATGGTCTTACCGGTTAAGGTTTTGACGAAAATTTGCATA 75187 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 |||||||| ||||| || || | ||| | ||||| || ||||| ||||| || || Sbjct 75416 CCACCTCTTAATCTCAAGACAAGATGTAAAGTGGATTCCTTTTGGATGTTATAGTCAGAC 75475 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 | |||| ||||| || || || || || | || || | ||||||||| ||| Sbjct 75476 AAGGTTCTGCTATCTTCCAACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAGGA 75535 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 || ||||||||||| ||| || ||| || | || ||||| ||| | ||| || Sbjct 75536 ATACCTTCTTTGTCTTGAATCTTAGACTTGACGTTATCGATGGTGTCGGAAGATTCGACT 75595 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 || || || ||||| ||||| || | ||||| || |||||||||||| Sbjct 75596 TCCAAAGTGATGGTCTTACCGGTTAAGGTTTTGACGAAAATTTGCATA 75643 Score = 87.8 bits (96), Expect = 1e-12 Identities = 158/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 |||||||| ||||| || || | ||| | ||||| || ||||| ||||| || || Sbjct 75872 CCACCTCTTAATCTCAAGACAAGATGTAAAGTGGATTCCTTTTGGATGTTATAGTCAGAC 75931 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 | |||| | ||||| || || || || || | || || | ||||||||| || Sbjct 75932 AAGGTTCTGCCATCTTCCAACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAGGG 75991 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 || ||||||||||| ||| || || || | || ||||| || | ||| || Sbjct 75992 ATACCTTCTTTGTCTTGAATCTTCGATTTCACGTTATCGATGGTGTCAGAAGATTCAACT 76051 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATTT 15367 || || || || || ||||| || | ||| || || ||||||||||| ||| Sbjct 76052 TCCAAAGTGATAGTCTTACCAGTTAAAGTCTTAACGAAAATTTGCATGTTT 76102 >seq1 Length=1050866 Score = 116 bits (128), Expect = 3e-21 Identities = 157/219 (72%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 |||||||||||||| ||||| || || | ||||| || ||||| |||||||| || Sbjct 59860 CCACCTCTCAATCTCAAAACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCAGAC 59801 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 | |||| | ||||| ||||| || ||||| | ||||| | ||||||||| ||| Sbjct 59800 AAGGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGG 59741 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 || ||||| ||||| ||| || ||| ||| | || ||||| ||| | ||| || Sbjct 59740 ATACCTTCCTTGTCTTGAATCTTAGACTTGACATTGTCAATGGTGTCGGAAGATTCGACT 59681 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAA 15355 || || || ||||| ||||| |||| || || || ||| Sbjct 59680 TCCAAAGTGATGGTCTTACCAGTCAAGGTCTTGACGAAA 59642 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 362179169101587