Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20lactis_20[genbank_20GCA_5F002151565.1_202017-05-19] 7 sequences; 10,682,662 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq6 201 1e-46 >seq6 Length=2601250 Score = 201 bits (222), Expect = 1e-46 Identities = 560/853 (66%), Gaps = 37/853 (4%) Strand=Plus/Minus Query 12860 TTTTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTTCCTTCTAACGAAATATTT 12919 ||||| || ||| ||||| ||||| |||||||| || || || | || || |||||| Sbjct 1394650 TTTTGGTAATCGGAGACTCTCTTTTCGAAAAAGTTGGTCTTACCAGCCAAGGAGATATTT 1394591 Query 12920 TCCATAAAATCGAAAGGATTTTTCGAACAAT--AGTATTTTTTACACCCTAATTCTAGTA 12977 ||||| |||||||| || || | ||| | | ||||| || || || | | | Sbjct 1394590 TCCATGAAATCGAATGGGTTGGTG--ACATTGAAATATTTCTTGTTACCCAAGGCGACCA 1394533 Query 12978 ACAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAATCACAGTTCATTCCTATTA 13037 | |||||||| || ||||| || | ||| || |||||||| || |||||| || | || Sbjct 1394532 ATAATCTGTCGGCGACAAATTCCACGTATTGGTTCATTAAGTCTGCGTTCATACCCAATA 1394473 Query 13038 ATTTTACAGGCATAGCTTCTGTTAAAAAGtttttttCTATATCAACTGCTTCGATAACTA 13097 || || | ||| || | || | | ||||| || || || ||||| ||| | Sbjct 1394472 GAGAAACGGGTAGAGCATCCATGAAGTATCTCTTTTCAATTTCGACAGCTTCTGTAATGA 1394413 Query 13098 TGTCTCTTATTACGTTCTCTAATGGAGGATTTGATAGATGCTT---------AAACATCA 13148 | | || || | ||| ||||||| | || ||| ||| | | Sbjct 1394412 TCT---TTTCCACAATTTCT------GGATTTGGTTTATTCTTCAAATGGGCAAAGAGTA 1394362 Query 13149 TACATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTA 13208 ||| ||||| || || | ||||||||||||| || | |||||| || || || | Sbjct 1394361 GACAGGCAAAGTCTGTATGTAGACCTTCATCTCTACAGATCAACTCGTTAGAGAAAGTCA 1394302 Query 13209 GACCCGGCAT-AAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAACCCGaaaaa 13267 ||| ||||| || |||| || || || ||| || ||||||||||| ||||| || || Sbjct 1394301 AACCAGGCATTAACCCCTTCTTCTTCAA-CCAGAAGATAGCAGCAAAGGAACCGGAGAAG 1394243 Query 13268 aaTATTCCTTCAACTGCTGCAAACGCTATCAACCTTTCACCATACGTACTATTTTTACTC 13327 || | ||||| || || || || || | ||| ||||||||| || || | | Sbjct 1394242 AACACACCTTCCACAGCAGCGAAAGCAACCAATCTTTCACCAAACAAGGCATCATCATCT 1394183 Query 13328 TCTATCCACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTCATATTTTCTATTGCG 13387 | ||||| | | ||||| | || |||| ||||| ||| |||| || || Sbjct 1394182 TGAATCCATCTGATAGCCCATTCAGCCTTTTCTTTAATTTGTGGGATAGTTTCGATAGCA 1394123 Query 13388 TTAAATAAATAAtttttttCCTTACTGTCTAAAATATAAGTATCTATCAATAAGCTATAC 13447 || || ||| | | ||||||| || |||||| ||||| ||||| ||| ||| Sbjct 1394122 TTGAACAAAAACTCACTTTCCTTTGGATCCTTAATATAGGTATCAATCAACAAGGAATAA 1394063 Query 13448 ATTTCTGAATGAATATTTTCCATCGCTATTTGGAAACCATAAAAACATCTAGCCTCTGAT 13507 | |||||||| ||||| |||||| |||||||| ||||| |||||| | || |||| | Sbjct 1394062 GTCTCTGAATGGATATTCTCCATCATAATTTGGAACCCATAGAAACATTTCGCTTCTGGT 1394003 Query 13508 ACCTGAACTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTATCCCGTCACTAGCA 13567 | || ||||| | | || | || | |||||||||||||| || || || ||| Sbjct 1394002 GCTTGCACTTCAGCTGAGAAGTTCTCCACCAAGTTTTCGTTAACGATACCATCCGAGGCA 1393943 Query 13568 GCaaaaaaaGCAAGTAT----GTGCTTAATAAAtttt--ttttCGTT--TTCTGACAACT 13619 || || || || | || | | | || || ||| || || || ||||| | Sbjct 1393942 GCGAAGAACGCCAAAATTCTAGAGATAAAAAACCTTTCGTTCTCATTCATTCTG-----T 1393888 Query 13620 TTAACCAATCTGGAAAATCTTTTGATAAATCTACCTCCTCAACGGTCCAAAAAGAAGCAA 13679 | |||||| | ||||| || || ||||| | || || | ||||| ||||| || Sbjct 1393887 TGTTCCAATCGTGCAAATCCTTGGACAAATCGATTTCTTCTGCAGTCCAGAAAGACGCTT 1393828 Query 13680 CAGCCTTCTTATA 13692 | ||| ||||||| Sbjct 1393827 CGGCCCTCTTATA 1393815 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430982363231814