Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20lactis_20[genbank_20GCA_5F002151565.1_202017-05-19]
7 sequences; 10,682,662 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq6 197 3e-45
seq5 149 1e-30
seq1 111 4e-19
>seq6
Length=2601250
Score = 197 bits (218), Expect = 3e-45
Identities = 378/549 (69%), Gaps = 10/549 (2%)
Strand=Plus/Plus
Query 268753 GGCCGTTGCTTCTTTTTGGACTGTAGAAGAAGTAGATCTGTCTTATGACTTAATAGATTG 268812
||||| || ||||| ||||||| ||||||| | ||| |||| | || || |||||
Sbjct 1393823 GGCCGAAGCGTCTTTCTGGACTGCAGAAGAAATCGATTTGTCCAAGGATTTGCACGATTG 1393882
Query 268813 GAAAAATTTAA--AACCAGAA-GAAAGAAGATTTATATCTTATATTCTTGCGTTTTTTGC 268869
||| || || || |||| ||||| ||||| ||| ||| | ||||| || ||
Sbjct 1393883 GAACAACAGAATGAATGAGAACGAAAGGTTTTTTATCTCTAGAATTTTGGCGTTCTTCGC 1393942
Query 268870 AGTTAGTGATGGTATCGTTAACGAAAATCTAGTAGAGAAGTTCTGTCAAGAGGTACAGAT 268929
| |||||||||||||||||||| | || ||||| |||| || || ||
Sbjct 1393943 TGCCTCGGATGGTATCGTTAACGAAAACTTGGTGGAGAACTTCTCAGCTGAAGTGCAAGC 1394002
Query 268930 TCCTGAAGCCAGATGTTTTTACGGATTCCAGATAGCTATAGAAAATATTCATTCAGAGAT 268989
|| ||||| | |||||| || || ||||| || || || ||||| ||||||||||
Sbjct 1394003 ACCAGAAGCGAAATGTTTCTATGGGTTCCAAATTATGATGGAGAATATCCATTCAGAGAC 1394062
Query 268990 GTACAGTCTATTAATAGATACTTATATAGATGATAACAACGAAAAGAAAAGACTATTTTC 269049
|| | || || ||||| ||||| | ||| ||| | |||| | | | | |||
Sbjct 1394063 TTATTCCTTGTTGATTGATACCTATATTAAGGATC-CAAAGGAAAGTGA-GTTTTTGTTC 1394120
Query 269050 --TTCTATGAGAACTATGGACTGTGTGAGaaaaaaaTCTGAATGGGCTCTGAAATGGATA 269107
| |||| |||||| | | | |||| ||||||||||| | | ||||||
Sbjct 1394121 AATGCTATCGAAACTATCCCACAAATTAAAGAAAAGGCTGAATGGGCTATCAGATGGATT 1394180
Query 269108 AACGATAGCGC-GCCTTAC--GGAGAAAGGTTAGTTGCTTTTGCCGCTGTAGAAGGTATA 269164
| ||| | ||||| || ||||| || |||||||| || ||||| |||||| |
Sbjct 1394181 CAAGATGATGATGCCTTGTTTGGTGAAAGATTGGTTGCTTTCGCTGCTGTGGAAGGTGTG 1394240
Query 269165 TTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGGTTGAAGAAAAGAGGCCTTATGCCAGGA 269224
||||| || || || ||||| |||||||| ||||||||||| | || | ||||| ||
Sbjct 1394241 TTCTTCTCCGGTTCCTTTGCTGCTATCTTCTGGTTGAAGAAGAAGGGGTTAATGCCTGGT 1394300
Query 269225 TTAACTTTCTCTAACGAATTGATAAGCAGGGACGAAGGTTTACACTGCGACTTCGCTTGT 269284
|| |||||||||||||| ||||| | || || |||||| |||| ||||| || |||
Sbjct 1394301 TTGACTTTCTCTAACGAGTTGATCTGTAGAGATGAAGGTCTACATACAGACTTTGCCTGT 1394360
Query 269285 TTATTATTT 269293
|| | |||
Sbjct 1394361 CTACTCTTT 1394369
>seq5
Length=2217437
Score = 149 bits (164), Expect = 1e-30
Identities = 171/230 (74%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || ||||||| || | || ||||| || || |||||||| || || |||||||||
Sbjct 75185 ATACCACCTCTTAATCTCAAAACAAGATGCAAAGTGGATTCTTTTTGGATGTTATAGTCA 75244
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|| | ||||| || ||||| | || || || |||||||||| || ||||| || |||
Sbjct 75245 GACAAGGTTCTGCCATCTTCCAACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGA 75304
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || |||||||| || |||||||| | ||| || || || | ||| ||| || |||
Sbjct 75305 GGGATACCTTCTTTGTCTTGAATCTTCGATTTCACGTTATCGATGGTGTCGGAAGATTCG 75364
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|| || | || || ||||||||||| | ||||| || || || |||||
Sbjct 75365 ACTTCCAAAGTGATGGTCTTACCAGTCAAGGTTTTGACGAAAATTTGCAT 75414
Score = 145 bits (160), Expect = 2e-29
Identities = 172/233 (74%), Gaps = 0/233 (0%)
Strand=Plus/Plus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || ||||||| || | || |||||||| || ||||| || || || |||||||||
Sbjct 75869 ATACCACCTCTTAATCTCAAGACAAGATGTAAAGTGGATTCCTTTTGGATGTTATAGTCA 75928
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|| | ||||| || ||||| | || || || |||||||||| || ||||| || |||
Sbjct 75929 GACAAGGTTCTGCCATCTTCCAACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGA 75988
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || |||||||| || |||||||| | ||| || || || | ||| || || |||
Sbjct 75989 GGGATACCTTCTTTGTCTTGAATCTTCGATTTCACGTTATCGATGGTGTCAGAAGATTCA 76048
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTT 104562
|| || | || |||||||||||||| | || || || || || ||||| ||
Sbjct 76049 ACTTCCAAAGTGATAGTCTTACCAGTTAAAGTCTTAACGAAAATTTGCATGTT 76101
Score = 136 bits (150), Expect = 9e-27
Identities = 168/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || ||||||| || | || |||||||| || ||||| || || || |||||||||
Sbjct 74957 ATGCCACCTCTTAATCTCAAGACAAGATGTAAAGTGGATTCCTTTTGGATGTTATAGTCA 75016
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|| | ||||| || ||||| | || || || |||||||||| || ||||| || |||
Sbjct 75017 GACAAGGTTCTGCCATCTTCCAACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGA 75076
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || |||||||| || |||||||| | || || || || | ||| || || |||
Sbjct 75077 GGAATACCTTCTTTGTCTTGAATCTTAGACTTGACGTTATCGATGGTGTCAGAAGATTCA 75136
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|| || | || || |||||||| || | ||||| || || || |||||
Sbjct 75137 ACTTCCAAAGTGATGGTCTTACCGGTTAAGGTTTTGACGAAAATTTGCAT 75186
Score = 136 bits (150), Expect = 9e-27
Identities = 168/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || ||||||| || | || |||||||| || ||||| || || || |||||||||
Sbjct 75413 ATACCACCTCTTAATCTCAAGACAAGATGTAAAGTGGATTCCTTTTGGATGTTATAGTCA 75472
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|| | ||||| | ||||| | || || || |||||||||| || ||||| || |||
Sbjct 75473 GACAAGGTTCTGCTATCTTCCAACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGA 75532
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || |||||||| || |||||||| | || || || || | ||| ||| || |||
Sbjct 75533 GGAATACCTTCTTTGTCTTGAATCTTAGACTTGACGTTATCGATGGTGTCGGAAGATTCG 75592
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|| || | || || |||||||| || | ||||| || || || |||||
Sbjct 75593 ACTTCCAAAGTGATGGTCTTACCGGTTAAGGTTTTGACGAAAATTTGCAT 75642
Score = 136 bits (150), Expect = 9e-27
Identities = 168/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || ||||||| || | || ||||| || || |||||||| || || || || ||
Sbjct 75641 ATACCACCTCTTAATCTCAAAACAAGATGCAAAGTGGATTCTTTTTGGATGTTGTAATCG 75700
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|| | ||||| || ||||| | || || || |||||||||| || ||||| || |||
Sbjct 75701 GACAAGGTTCTTCCATCTTCCAACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGA 75760
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || |||||||| || |||||||| | ||| || || || | ||| ||| || |||
Sbjct 75761 GGGATACCTTCTTTGTCTTGAATCTTCGATTTCACGTTATCGATGGTGTCGGAAGATTCG 75820
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|| || | || || ||||||||||| | ||||| || || || |||||
Sbjct 75821 ACTTCCAAAGTGATGGTCTTACCAGTCAAGGTTTTGACGAAAATTTGCAT 75870
>seq1
Length=1050866
Score = 111 bits (122), Expect = 4e-19
Identities = 132/179 (74%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 104357 TGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGT 104416
|| || || ||||| || || || || |||||||| | |||||||| ||||| | |||
Sbjct 59836 TGCAAAGTGGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCATCTTCCAATTGC 59777
Query 104417 TTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTT 104476
|| |||||||| || | || ||||| || || || || ||||| || || ||||||||
Sbjct 59776 TTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGGATACCTTCCTTGTCTTGAATCTTA 59717
Query 104477 GCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGT 104535
| || ||||| || | ||| ||| || ||| || || | || || |||||||||||
Sbjct 59716 GACTTGACATTGTCAATGGTGTCGGAAGATTCGACTTCCAAAGTGATGGTCTTACCAGT 59658
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151398296733956
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |