Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20lactis_20[genbank_20GCA_5F002151565.1_202017-05-19] 7 sequences; 10,682,662 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq1 120 4e-22 seq3 96.9 4e-15 >seq1 Length=1050866 Score = 120 bits (132), Expect = 4e-22 Identities = 282/425 (66%), Gaps = 23/425 (5%) Strand=Plus/Minus Query 6831 ATGATCTAAATAAATATGAGCATCTCCTAGCGTATGAATAAATTCACCTGGTTTCATATC 6890 ||||||| ||||| ||| ||||| || | || |||||||||||||| |||| |||||| Sbjct 699289 ATGATCTTTATAAACATGCGCATCACCCAAAGTGTGAATAAATTCACCAGGTTCCATATC 699230 Query 6891 AACAG-CTTGAGCAATTAAATATGTTAATAATGCATAAGAAGCTACATTAAAAGGTACAC 6949 |||| | |||||| | | || | || ||||| || || | ||||| ||||| | Sbjct 699229 -ACAGACCATAGCAATCATCTTCGTCAGTAGCGCATACGACGCGATGTTAAAGGGTACTC 699171 Query 6950 CTAATCCCATATCTGCTGATCTTTGATAACATTGACAAGATAAAAT---ATTG------T 7000 ||| |||||||| |||||| |||||| | ||| || || | ||| | Sbjct 699170 CTAGACCCATATCACATGATCTCTGATAAAGTACACATGACAATCTTGGTTTGGCACCTT 699111 Query 7001 CT------------ATAGCATAAAATTGACACAATACATGACATGGAGGTAAAACAGCCT 7048 || | | |||||||| | || ||||| ||||| |||||| | || Sbjct 699110 CTCCCCTGGGGAAACTGACGTAAAATTGCGAGAAAACATGGCATGGCGGTAAAGCCATCT 699051 Query 7049 GATCTATATCAGATGGATTCCAAGCAGTCATTAAAATACGTCTATCATTTGGATTTGTTT 7108 | ||| | || ||||| |||| | | || | ||| || | ||||||||| | Sbjct 699050 TGGGGAAATCCGGAGGGTTCCATGCAGAAAGAATTATTCTTCTGTCGTATGGATTTGTCT 698991 Query 7109 TTAATTTTGTTATAATTATTTGTAATTGATCTATACCCTGACCTTCATAATTAGTATGAC 7168 | || || ||||| | || ||||| | ||| ||||| ||||| | || || Sbjct 698990 TCAACTTATGAATAATCTCCTTCAACTGATCAACACCTTGACCACTATAATCATCATCAC 698931 Query 7169 AATTTATATAATTAGCTCCAAAATGTCTCCATTGAAACCCATAAATAGGACCTAAATCAC 7228 | | |||| | || ||||||||||||||||| ||||| |||| || |||||||| | Sbjct 698930 ATGTCTTATATTCGGCCCCAAAATGTCTCCATTGGAACCCGTAAACTGGTCCTAAATCCC 698871 Query 7229 CTTCT 7233 | ||| Sbjct 698870 CCTCT 698866 >seq3 Length=1752996 Score = 96.9 bits (106), Expect = 4e-15 Identities = 116/158 (73%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 164794 GTGGTTAATCAGTTGCTTTCTAAAATAGATGGTGTAGAATCCTTAAATAATATTTTAATT 164853 || || || || || ||| | || || |||||||| || || || ||||| ||| || Sbjct 1252260 GTTGTCAACCAATTACTTGCCAAGATGGATGGTGTCGATCAATTGAACAATATCTTAGTT 1252201 Query 164854 GTAGGTATGACCAACCGACCTGATTTAATTGATGATGCTTTATTACGACCTGGTCGATTA 164913 | ||||||||||| || ||||| |||||| | |||||| |||| |||||| |||| Sbjct 1252200 ATTGGTATGACCAATCGTAAAGATTTGATTGATAACGCTTTACTACGTCCTGGTAGATTC 1252141 Query 164914 GAATTGAAAATAGAAATAGGATTACCCGACAAAGAAGG 164951 ||| | || | ||||| |||||| ||| ||||||| Sbjct 1252140 GAAGTACAAGTTGAAATTCAATTACCGGACGAAGAAGG 1252103 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595871947861200