Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20lactis_20[genbank_20GCA_5F002151565.1_202017-05-19] 7 sequences; 10,682,662 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq3 273 3e-68 seq6 181 1e-40 >seq3 Length=1752996 Score = 273 bits (302), Expect = 3e-68 Identities = 810/1240 (65%), Gaps = 18/1240 (1%) Strand=Plus/Plus Query 62968 ACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAA 63027 |||| || || || | || | |||||| ||||| |||||| |||||||| ||||| | Sbjct 676419 ACTTAATGGTACCCAGGTTCTTTTGATTGCTCTTCAAGTTACAAGCATCCTTGTAAAGCA 676478 Query 63028 TGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCT 63087 |||| |||||||| ||||| | || | ||| | || || | ||| | | | |||| Sbjct 676479 TGAACGGAGTACCTGTTTCTGTTTGCGCTTCCAAGATAGCATACCATAATTTTTGGGCCT 676538 Query 63088 TTATTATAGATTTGTATCTC--CTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTC 63145 | | | ||| || | | | |||||||||||| || ||||| | ||| || || Sbjct 676539 TAACGGTT--TTTCTACCACGACCTTCTCTTTCGTAACGTTCATACATTTCTTCAAATTC 676596 Query 63146 GTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCC 63205 || || || | | || || ||| ||||| ||| | | ||| | ||| || Sbjct 676597 TTCACCGTAAGCGTCAGGTAAACCGGGAGCTTCATTAGGAGAGAACAAGGTCCAGTCCTG 676656 Query 63206 GTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCT 63265 || | | ||||| ||||| || | |||||||||||| | || |||| |||||| Sbjct 676657 GTTCTTTTCCACTCTCTTCATGAACAAATCAGGAATCCACAATGCAGGGAATAAATCTCT 676716 Query 63266 GGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGA 63325 | | | ||| || ||||| |||||| | | ||| | ||| | | |||||||| Sbjct 676717 AGCACGAATTTCTTCCTTTCCATGATTCTTCCTGATATCAATGAAATCGAAGATATCAGA 676776 Query 63326 ATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTAT 63385 |||||| ||||| | ||||| || | | || || | ||||| || || || || | Sbjct 676777 ATGCCATGGTTCAATGTATAAAGCGAAGGCACCTGGTCTCTTGTTACCACCTTGGTCAAC 676836 Query 63386 GTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATT 63445 ||| | ||| ||||| || | || | | ||||||||| ||||| || || | || || Sbjct 676837 GTAACGAGCAGTGTTGTTGAAGACACGGATCATTGGAATGATACCATTAGAAGTTCCGTT 676896 Query 63446 GGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCC 63505 |||||| | || || ||| | | ||| || || ||| | || || || || Sbjct 676897 GGTACCAGCAATGTAAGAACCAGTAGAACGGATGTTGTGAATGTGCAACCCAATACCACC 676956 Query 63506 TGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCCTCTATGCTATC 63565 || | || ||||| | || ||| || || || || || ||||| || ||| ||| Sbjct 676957 AGCAGTCTTTGAGATCATAGCACATTCCTTCAAGGTATCGTAAATACCTTCGATGGAATC 677016 Query 63566 ATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAA 63625 || |||| || | ||||| |||||||| || || ||| || || || || Sbjct 677017 CTCTTTCATAGCAACCAAGAAACAAGATGACATTTGAGGATGAGGAGTACCAGCGTTGAA 677076 Query 63626 TAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTC-AATAG 63684 || |||||||||||||| || || || ||| ||| | ||| ||||| ||||| |||| Sbjct 677077 CAATGTAGGAGAAGCGTGGGTGAAATATCTTTGAGACATTAGGTTGTAAGTCTCTAATA- 677135 Query 63685 CTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTC 63744 || |||||||| ||||| || || || || | ||| | |||||| || || | Sbjct 677136 CTCGTTCTATATCGTTACCGTGAATACCAACAGCCACTCTCATAATCATGTGTTGTGGAC 677195 Query 63745 TTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAA 63804 |||| | | ||| | ||| |||||||||| || ||| || || || ||||| | Sbjct 677196 GTTCAGCAACCTTACCATCGATTCTCAACAAGTAAGAACGTTCTAAGGTCTTGAAACCGA 677255 Query 63805 AATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATT 63864 | || ||| || || |||| ||||||| ||| | ||||| | | ||||||| | Sbjct 677256 AGTAATTGAATTGGAAATCTCTGTCGTAAACGATAGCAGAGTTCAAAGTGTCCTTATTAT 677315 Query 63865 TGTTAACTATATCCATGGTGATACTT-----GAAATAATCGGAGAATGTTTCCCATTTTT 63919 | || || | || | |||| ||||| || || || || | ||| | | Sbjct 677316 CCATGACAATCT-TAT----AAACTTCGTCGGAAATCATTGGGGAGTGAATACCAGTCCT 677370 Query 63920 AGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTT 63979 |||||||| | | | | || || || | |||| | || ||||| | |||| ||| Sbjct 677371 TGGATTAACCCATTGGTACAAGTCGTCAACAACTTGAGAGAACTGTTTTGTAGTTTGCTT 677430 Query 63980 GTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGT 64039 ||| | ||| || | || ||||| || || || | |||||||| ||||| || || Sbjct 677431 GTGCAAATTAGAAATAGCAATTCTAGCAGCCAGGGTAGCATAATCTGGATGGATAGTGGT 677490 Query 64040 ACAAGT-GGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTAT 64098 || || || | |||| || |||| | | |||||||| || || || || || | || Sbjct 677491 -CATGTAAGCACATGTTTCAGCAGCCAAATTATCCAATTCCACGGTAGTAACACCTTCAT 677549 Query 64099 ATATTCCTTGAATAACCTTCATAGCTATTTTAATAGGATCTATATGATCCGTGTTTAAGC 64158 | | || ||||| | || ||||||| || ||| ||||| | | | ||| | Sbjct 677550 AAACACCAGAAATAATACGCTGAGTGATTTTAACAGCATCGATATGTTTTGCATCTAAAC 677609 Query 64159 CATAACATAATTTTCTAATACGAGACGTGATTTTATCAAA 64198 ||||||| | | | ||| | ||||| |||||||| Sbjct 677610 CATAACAGAGACGTGACACACGCGCAGTGATCTTATCAAA 677649 >seq6 Length=2601250 Score = 181 bits (200), Expect = 1e-40 Identities = 578/885 (65%), Gaps = 20/885 (2%) Strand=Plus/Minus Query 33013 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 33072 |||||||| || || | ||||||||||| || || || || |||| || |||||| Sbjct 1394650 TTTTGGTAATCGGAGACTCTCTTTTCGAAAAAGTTGGTCTTACCAGCCAAGGAGATATTT 1394591 Query 33073 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTC-AGAAAT 33131 ||||||||||| || || ||||| ||||| || ||| || ||||| | | ||| Sbjct 1394590 TCCATGAAATCGAATGGGTTGGTGACATTGAAATATTTCTTGTTACCCAAGGCGACCAAT 1394531 Query 33132 CAATCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAG 33191 ||||| || ||||| ||||| | ||| ||||| | || ||||| || | || Sbjct 1394530 -AATCTGTCGGCGACAAATTCCACGTATTGGTTCATTAAGTCTGCGTTCATACCCAATAG 1394472 Query 33192 TTTAACTGGAAGAGC-CGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAA 33250 ||| || ||||| || ||| | |||| |||||| || || ||||| || | Sbjct 1394471 AGAAACGGGTAGAGCATCCATGAAGTATCTCTT-TTCAATTTCGACAGCTTCTGTAATGA 1394413 Query 33251 TAGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGA 33310 | | || ||||| | | ||| || | ||||| ||| | | ||| || | Sbjct 1394412 TCTTTTCCACAATTTCTGGATTTGGTTTATTCTTCAAATGGGCAAAGAGTAGACAGGCAA 1394353 Query 33311 AATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCA 33370 | || || ||||| || ||||||| || | ||||| || || || | || |||| Sbjct 1394352 AGTCTGTATGTAGACCTTCATCTCTACAGATCAACTCGTTAGAGAAAGTCAAACCAGGCA 1394293 Query 33371 TTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTT 33430 ||| || ||| || | ||| || || | ||| || || || || ||||| | |||| Sbjct 1394292 TTAACCCCTTCTTCTTCAACCAGAAGATAGCAGCAAAGGAACCGGAGAAGAACACACCTT 1394233 Query 33431 CTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTCA---TGTATCCACT 33487 | || ||||| || |||| | ||| || ||| | ||| ||| || ||||| Sbjct 1394232 CCACAGCAGCGAAAGCAACCAATCTTTCACCAAACAAGGCATCATCATCTTGAATCCATC 1394173 Query 33488 TTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGAT 33547 | |||||| || ||||| | ||| | || || ||||| || ||||| || | | Sbjct 1394172 TGATAGCCCATTCAGCCTTTTCTTTAATTTGTGGGATAGTTTCGATAGCATTGAACAAAA 1394113 Query 33548 AGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAAT 33607 | | |||| || ||| |||| ||| ||||| ||||| | ||| | || |||| Sbjct 1394112 ACTCACTTTCCTTTGGATCCTTAATATAGGTATCAATCAACAAGGAATAAGTCTCTGAAT 1394053 Query 33608 GAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTC-GGTAATCTGTACT 33666 | || || || || || || || || ||||||||| | || || ||| | || ||| Sbjct 1394052 GGATATTCTCCATCATAATTTGGAACCCATAGAAACATTTCGCTTCTGGTGCT-TGCACT 1393994 Query 33667 TCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAAC 33726 || | | || ||| |||| ||||| || || || || || ||| || || ||| Sbjct 1393993 TCAGCTGAGAAGTTCTCCACCAAGTTTTCGTTAACGATACCATCCGAGGCAGCGAAGAAC 1393934 Query 33727 GCCAATACATGTTTT----ATAAAATATTTTTCG-TCTGGT--GTTAGTTTATTCCAATC 33779 ||||| | || | |||||| | ||||| ||| | || || |||||||| Sbjct 1393933 GCCAAAA----TTCTAGAGATAAAAAACCTTTCGTTCTCATTCATTCTGTTGTTCCAATC 1393878 Query 33780 ATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTT 33839 | | ||| || || | ||| | |||||| | ||||| || || || || ||| | || Sbjct 1393877 GTGCAAATCCTTGGACAAATCGATTTCTTCTGCAGTCCAGAAAGACGCTTCGGCCCTCTT 1393818 Query 33840 ATACATGTTCCAGATGTCATAATATTGGATTGGGAAAATAACAAA 33884 ||| | ||| || |||| || | ||||||||| | |||||| Sbjct 1393817 ATATGCTTCCCAAATCTCATGGTACTTGATTGGGAAGAGAACAAA 1393773 Score = 167 bits (184), Expect = 3e-36 Identities = 586/903 (65%), Gaps = 29/903 (3%) Strand=Plus/Minus Query 62601 TCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTA 62660 ||||||||||| ||||| | ||| ||| ||| |||||||| || |||| || Sbjct 110987 TCAGCTAGTTCTGTGGAAGCCTCGATAGCAGCGTGATATATGGTTTCAAAAATCTGTTTG 110928 Query 62661 TTTAGA-TCTTGTGCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCCGC 62719 |||| | || | || || | ||||||||| | |||| || || | ||| || Sbjct 110927 TTTAAAGTCGCG-GCATCAACCGATTCAAATGGAGTACGGCAGAGCATGAATGTGTCTGC 110869 Query 62720 TAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTC-AGCTTCTG 62778 || |||||||| |||||| | | ||| || | ||| |||| ||||| ||| || | Sbjct 110868 CAACCCTTGAACCCCAATAGCCAAAGGCCTGTTTCTTATATTTCC-ATTTCTAGCCTCAG 110810 Query 62779 GAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACAATTACTTTGACCA 62838 ||| |||||| | | ||| ||| | ||| | |||| | || | || || || | Sbjct 110809 GAACAGGATATTTTCCCACATCGATAGTCCTATCTAAATTTTTAACGAGAACCTTAACAA 110750 Query 62839 CATCCTTCAGTTTGAGAAAATCAAATC------GCCCATCT--------ATT-ACAAACA 62883 ||| | ||||| | || |||||| | ||||| ||| ||| | Sbjct 110749 CATGATGTAGTTTCACGAAGTCAAATACAGGCGGTCCATCGGAACTCAAATTGACATAAG 110690 Query 62884 TGTTCAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTA 62943 | |||||||||||||| |||||||| || || ||||| | | | || | | Sbjct 110689 TAGGTAAGGCAACAGATGCTAGATTACAGACAGCAACCTCTTCTGGAGAGCTGTACTCGA 110630 Query 62944 TTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTT 63003 || || |||||||||| | |||||| || | ||||| |||||| |||| Sbjct 110629 CAATTTCGCAGCAAAGATTAGATGATTTGATAACGCCGAGATTTTTCTGATTAGATTTTT 110570 Query 63004 TGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAA 63063 | ||||| ||||| ||||| || ||||| || ||||| || | ||| || | | Sbjct 110569 TATTACATGCATCTTTATAGAGCATGAACGGCACTCCAGTCTCCGTTTGACTTTGAAGTA 110510 Query 63064 TCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCCT--TTCTCTTTCGTA 63121 || || ||| | | | || || ||| | || || | |||| | ||||| Sbjct 110509 TCTCTGACCAAATTTGTTGCGCTTTCATTTTT--TTCCTAGGAATTAGTTCTTTCTCGTA 110452 Query 63122 TAGTGTATACAATCGT-TCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCAT 63180 | | ||| || | | || || || || || || || | ||||| ||||| Sbjct 110451 TCTTTCATA-AAGCTTATCAAATTCATCACCATAACAATCAGTTAGCCCAGGTGCTTCAT 110393 Query 63181 CCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAA 63240 | || | | | ||||| ||| | | || || || || ||||||||||||||||| | Sbjct 110392 CTGGGGAAAAAATTGACCAGTCTTCATTATTCTCAACCCGCTTCATAAAGAGATCAGGTA 110333 Query 63241 TCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAA 63300 |||| || || ||| | |||||| | || |||||| || || ||||||| | | Sbjct 110332 TCCAGAGGGCATAAAACAAATCTCTTGCCCTCATTTCCTCTTTGCCATGATTCTTTCTCA 110273 Query 63301 GATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAA--CTCC 63358 | | | ||| | || || || | |||||| || ||||| ||||| || || |||| Sbjct 110272 GTTGCAAGAAGTCAATTATGTCTGCATGCCAGGGCTCCAAATATAT--ACAGAATGCTCC 110215 Query 63359 AGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACAT 63418 || | ||| ||||| || ||||| | || || || |||||||| |||| || ||||| Sbjct 110214 TGGTCTTTTATTTCCACCTTGATCAACATACCTGGCAGTGTTATTGAAAACCCTTAACAT 110155 Query 63419 TGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAAT 63478 ||| | || || || ||| | || |||| ||| |||||||| |||| | ||||| || Sbjct 110154 TGGCACAAGGCCATTGGATGTTCCGTTGGAACCTGAGATATATGCTCCATTTGCACGGAT 110095 Query 63479 ATT 63481 ||| Sbjct 110094 ATT 110092 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622947145492120