Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20lactis_20[genbank_20GCA_5F002151565.1_202017-05-19] 7 sequences; 10,682,662 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq5 141 8e-29 seq4 127 2e-24 seq1 127 2e-24 seq3 105 6e-18 >seq5 Length=2217437 Score = 141 bits (156), Expect = 8e-29 Identities = 162/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||| || ||||| ||||||||||| || ||||| | ||||| ||| | || Sbjct 75642 ATGCAAATTTTCGTCAAAACCTTAACCGGTAAGACCATCACTTTGGAAGTCGAATCTTCC 75583 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || | |||| || ||||||||||| || |||||||| || || ||| Sbjct 75582 GACACCATCGATAACGTCAAGTCTAAGATTCAAGACAAAGAAGGTATTCCTCCAGACCAA 75523 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||| | | || ||||| || || ||||| || ||| | | ||| | || || || ||| Sbjct 75522 CAAAGATTAATTTTTGCAGGTAAGCAGTTGGAAGATAGCAGAACCTTGTCTGACTATAAC 75463 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATT 22436 || ||||| |||||||| ||||| | || ||| |||| Sbjct 75462 ATCCAAAAGGAATCCACTTTACATCTTGTCTTGAGATT 75425 Score = 141 bits (156), Expect = 8e-29 Identities = 162/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||| || ||||| || || ||||| || ||||| | ||||| ||| | || Sbjct 75870 ATGCAAATTTTCGTCAAAACCTTGACTGGTAAGACCATCACTTTGGAAGTCGAATCTTCC 75811 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || | | ||| || ||||||||||| || ||||| || || || ||| Sbjct 75810 GACACCATCGATAACGTGAAATCGAAGATTCAAGACAAAGAAGGTATCCCTCCAGACCAA 75751 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||| | | || ||||| || || ||||| || ||| | ||| | |||||||||||| Sbjct 75750 CAAAGATTAATTTTTGCAGGTAAGCAGTTGGAAGATGGAAGAACCTTGTCCGATTACAAC 75691 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATT 22436 || |||||||||||||| | ||| | |||||| |||| Sbjct 75690 ATCCAAAAAGAATCCACTTTGCATCTTGTTTTGAGATT 75653 Score = 136 bits (150), Expect = 3e-27 Identities = 161/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||| || ||||| ||||||||||| || ||||| | ||||| ||| | | Sbjct 75186 ATGCAAATTTTCGTCAAAACCTTAACCGGTAAGACCATCACTTTGGAAGTTGAATCTTCT 75127 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || | |||| || ||||||||||| || |||||||| || || ||| Sbjct 75126 GACACCATCGATAACGTCAAGTCTAAGATTCAAGACAAAGAAGGTATTCCTCCAGACCAA 75067 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||| | | || ||||| || || ||||| || ||| | | ||| | || || || ||| Sbjct 75066 CAAAGATTAATTTTTGCAGGTAAGCAGTTGGAAGATGGCAGAACCTTGTCTGACTATAAC 75007 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATT 22436 || ||||| |||||||| ||||| | || ||| |||| Sbjct 75006 ATCCAAAAGGAATCCACTTTACATCTTGTCTTGAGATT 74969 Score = 134 bits (148), Expect = 1e-26 Identities = 163/222 (73%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 22215 AAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAAC 22274 ||| ||||||||||| ||||| |||||||| ||||| || ||||| | ||||| ||| | Sbjct 76102 AAACATGCAAATTTTCGTTAAGACTTTAACTGGTAAGACTATCACTTTGGAAGTTGAATC 76043 Query 22275 CACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGA 22334 | || ||| | || | | ||| || ||||||||||| || ||||| || || || Sbjct 76042 TTCTGACACCATCGATAACGTGAAATCGAAGATTCAAGACAAAGAAGGTATCCCTCCAGA 75983 Query 22335 TCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTA 22394 |||||| | | || ||||| || || ||||| || ||| | | ||| | || || || Sbjct 75982 CCAACAAAGATTAATTTTTGCAGGTAAGCAGTTGGAAGATGGCAGAACCTTGTCTGACTA 75923 Query 22395 CAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATT 22436 ||||| ||||| |||||||| ||||| | || ||| |||| Sbjct 75922 TAACATCCAAAAGGAATCCACTTTACATCTTGTCTTGAGATT 75881 Score = 132 bits (146), Expect = 4e-26 Identities = 160/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||| || ||||| || || ||||| || ||||| | ||||| ||| | || Sbjct 75414 ATGCAAATTTTCGTCAAAACCTTGACTGGTAAGACCATCACTTTGGAAGTCGAATCTTCC 75355 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || | | ||| || ||||||||||| || ||||| || || || ||| Sbjct 75354 GACACCATCGATAACGTGAAATCGAAGATTCAAGACAAAGAAGGTATCCCTCCAGACCAA 75295 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||| | | || ||||| || || ||||| || ||| | | ||| | || || || ||| Sbjct 75294 CAAAGATTAATTTTTGCAGGTAAGCAGTTGGAAGATGGCAGAACCTTGTCTGACTATAAC 75235 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATT 22436 || |||||||||||||| | ||| | |||||| |||| Sbjct 75234 ATCCAAAAAGAATCCACTTTGCATCTTGTTTTGAGATT 75197 >seq4 Length=1700866 Score = 127 bits (140), Expect = 2e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||| || ||||| ||||| ||||| || | || | ||||| ||| | || Sbjct 1530870 ATGCAAATTTTCGTCAAAACCTTAACAGGTAAGACCATTACCTTGGAAGTCGAATCTTCC 1530929 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| || | || || || ||||||||||| |||||||| || || ||| Sbjct 1530930 GACACCATTGACAATGTTAAGTCTAAGATCCAAGACAAGGAAGGTATTCCTCCAGACCAA 1530989 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||| | | || ||||| || || || || || ||| | || | ||||| |||||| Sbjct 1530990 CAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTACAAC 1531049 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || ||||| |||||||| | || || || ||| ||||| | || ||| Sbjct 1531050 ATCCAAAAGGAATCCACTTTGCACTTGGTCTTGAGATTGAGAGGTGGT 1531097 >seq1 Length=1050866 Score = 127 bits (140), Expect = 2e-24 Identities = 160/220 (73%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 22227 TTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGT 22286 ||| || || || || || ||||| || ||||| | ||||| ||| | |||| ||| | Sbjct 59642 TTTCGTCAAGACCTTGACTGGTAAGACCATCACTTTGGAAGTCGAATCTTCCGACACCAT 59701 Query 22287 GGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCT 22346 ||| || |||| || |||||||||||||| ||||| ||||| || |||||| | | Sbjct 59702 TGACAATGTCAAGTCTAAGATTCAAGACAAGGAAGGTATCCCACCAGACCAACAAAGATT 59761 Query 22347 TATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAA 22406 || ||||| || || || || || ||| | ||| | || || |||||||| ||||| Sbjct 59762 GATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACCTTGTCTGACTACAACATCCAAAA 59821 Query 22407 AGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 |||||||| | || || |||||| ||||| | || ||| Sbjct 59822 GGAATCCACTTTGCACTTGGTTTTGAGATTGAGAGGTGGT 59861 >seq3 Length=1752996 Score = 105 bits (116), Expect = 6e-18 Identities = 700/1111 (63%), Gaps = 40/1111 (4%) Strand=Plus/Plus Query 128776 GACTTGTCCACGGTAAATTTAATAGCGTCCGCTGCCGGCTTG-GTGCGCAAATAGTACAT 128834 ||||| || | ||||||| ||| || | | ||| | |||| || | | |||||||| Sbjct 675413 GACTTATCGATAGTAAATTGAATTGCAGCAGATGCAG-CTTGTGTTCTTAGGTAGTACAT 675471 Query 128835 GCCTGTTTTCAAACCGCTTTTCCAAGTGTGCATGTGAATCGTGGTCAACAATGCGTAGGT 128894 || || |||||||| ||||||| || | || || | || ||| | ||| Sbjct 675472 ACCAGTCTTCAAACCCTTTTTCCATCCGTAGAAATGCATGGAAGTTAACTTACCCATGGT 675531 Query 128895 GGGTTGACTCaaaaaaaTATTAAATGATTGACTTTGATCAATAAAGGGGCCGCGATCGGC 128954 ||| || | | ||||| || |||||| ||||||||| | | | || ||||| Sbjct 675532 TGGTGCACGAATATGGATATTTAAGGATTGAGATTGATCAATGTAAGCAGCACGGTCGGC 675591 Query 128955 AGCCATACCAATCAAAT--TTTTCACTTTCATTTCCCACACCGTTTTGTAAAGCTCTCTC 129012 ||||| | || | || |||| | || |||||| || || ||||| || || || Sbjct 675592 CGCCATGTCGATAATATGCTTTTGAGA--CAATTCCCAAACAGTCTTGTATAGGTCCTTC 675649 Query 129013 ACGTGTTTTGGTATTTCTTCAATGTTCTGCACGCTGCCGTTGTTTGCAATAATTTTGTTT 129072 | | || ||| || | | | |||||| | | || |||| |||||||| | | Sbjct 675650 AATTCTTGTGGGATATTTGGTAAGTTCTGAATGGAACCATTGTCGGCAATAATATGAGAT 675709 Query 129073 CGCATCTGTTCGTTGTACAAATTCAGTTTGATCAAATCGTCGGTCAAGTATTTGTTTATT 129132 ||| ||| | | | | || | | ||| || | |||||| ||| | Sbjct 675710 TTCATAGCTTCATCCCAAATACCCAAGTCAACCAAGTCATGCAATAAGTATGGGTTGACA 675769 Query 129133 ACTTGAAAGTCACCCGCCAAAACGCGCCGAACGTAAATGTTGTTGGTGAACGGCTCAAAC 129192 | ||| || ||||| | |||||| || ||| ||| |||||| ||| | || ||||| Sbjct 675770 ATTTGGAACTCACCAGACAAAACACGACGAGAGTACATGTTGGATGTGTATGGTTCAAAA 675829 Query 129193 GATTCATTGTTGCCTAATATTTGAGCCGTTGTCGCGGTGGGCATGTAAGCCACGCAAAGC 129252 |||| |||| || || ||||||| || | || || ||||| ||| || | | Sbjct 675830 CATTCGTTGTAACCCAAAATTTGAGATGTGGATGCTGTTGGCATTGGAGCAACCAACAAT 675889 Query 129253 GAGTTTCGCAAACCGTGCTGTTTAATGTCtttttttAATTGTGTCCAGTCCCACATCGAT 129312 ||||||| || ||| | | || || | || ||| || |||||||||| | | Sbjct 675890 GAGTTTCTCATACCATTCAACTTGATTTGTTCTTTCAAAGTATTCCAGTCCCATAGAGCA 675949 Query 129313 GTGGGTGTGTGATTCCACAAGTCGTATTGCAATATACCCAAACTGGCGGGACTGGAAAAG 129372 || ||||| | | ||| || ||| |||||||| ||| | || ||| || Sbjct 675950 GTTGGTGTCTTACCCCATAAATCGAATTGCAATTGACCTTGAGATGCAGGAG----AACC 676005 Query 129373 TAGGAATCGTGCAC----GCCGTAAGCTTTTGCCAATTC---GCAACTCGCTTCCAATGC 129425 | ||||| | || ||| | |||| |||||||| | || ||||| | || Sbjct 676006 TGGGAATGTTTCATAATGGCCTTCTTCTTTGGCCAATTCCATGGAA---GCTTCGCAGGC 676062 Query 129426 GCCAAAATAAATTGTTTCGGCAATTTTGGTGTTCAACACTTTGGCCTGGTCGCTTTCGTA 129485 ||| ||||| |||||| |||| |||||| || || | || || | Sbjct 676063 ACCATGGTAAATGGTTTCGAAGATTTCAATGTTCAGTTTCTTAGCTTCTTCAGAATCAAA 676122 Query 129486 CGGCATACGCAACATGGCAAATGTGTCGGCCAAACCTTGAATACCCACACCGATGGGTCG 129545 |||| ||||||||| ||| | |||||| | |||||| | ||||| | | || |||| Sbjct 676123 TGGCAAACGCAACATCATAAAAGCGTCGGCTAGACCTTGGACACCCAAAGCAATAGGTCT 676182 Query 129546 ATGTTTTCTATTGGATTTTTGTGCCGA--CAACAAGGGATAGTAGTTGATGTCTATAATT 129603 ||| | | || ||| || || | |||| || || ||||| |||||| ||| Sbjct 676183 GTGTCTCATGTTCGATCTTCTAGCGGTTTCAACTGGG--TAATAGTTACGGTCTATGATT 676240 Query 129604 TTGTTTAAATT-CTTGACCACAATTTTCGTTACGTATTTTAACATTTCAAAATTGTAC-T 129661 |||| || || | || | | || | | | | || | | ||||| ||||| | Sbjct 676241 CTGTTCAAGTTGCGTGTT-AGTACCTTAGCGATGCTGTGTAGCTTCTCAAAGTTGTATGT 676299 Query 129662 C-GCCTACATCGAT--GTCGACAAATTGATTGACAC-----AA----ATCGAGGCCAAAT 129709 | | | || | || ||| || | ||| | || || || ||||| | Sbjct 676300 CTGAGTTTTTCCGTCGGTAGACCT-TTCAATGAAAGCTGGTAACGCGATGGAAGCCAAGT 676358 Query 129710 TGCAGACGGCACTTTCGTTTTTGTCACTGTACTCGACAATTTCGGCGCACAAATTACTAT 129769 | || ||||| |||| | |||| || ||||||||||| ||||| || | Sbjct 676359 TACAAACGGCGGTTTCTGTAGGGTCAGAATATTCGACAATTTCACAACACAAGTTTGAAG 676418 Query 129770 TTTTAATGGTGCCCAAATGCTTTTGATTACTTTTCATGTTGCAAGCATCTTTGTACATCA 129829 |||||||| |||| | ||||||||| || |||| ||| |||||||| ||||| | || Sbjct 676419 ACTTAATGGTACCCAGGTTCTTTTGATTGCTCTTCAAGTTACAAGCATCCTTGTAAAGCA 676478 Query 129830 TGTACGGCGTGCCCGTTTCGACTTGCGTTTC 129860 || |||| || || ||||| ||||| ||| Sbjct 676479 TGAACGGAGTACCTGTTTCTGTTTGCGCTTC 676509 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419727964191955