Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20lactis_20[genbank_20GCA_5F002151565.1_202017-05-19]
7 sequences; 10,682,662 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq5 141 8e-29
seq4 127 2e-24
seq1 127 2e-24
seq3 105 6e-18
>seq5
Length=2217437
Score = 141 bits (156), Expect = 8e-29
Identities = 162/218 (74%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||||||||| || ||||| ||||||||||| || ||||| | ||||| ||| | ||
Sbjct 75642 ATGCAAATTTTCGTCAAAACCTTAACCGGTAAGACCATCACTTTGGAAGTCGAATCTTCC 75583
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | || | |||| || ||||||||||| || |||||||| || || |||
Sbjct 75582 GACACCATCGATAACGTCAAGTCTAAGATTCAAGACAAAGAAGGTATTCCTCCAGACCAA 75523
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||| | | || ||||| || || ||||| || ||| | | ||| | || || || |||
Sbjct 75522 CAAAGATTAATTTTTGCAGGTAAGCAGTTGGAAGATAGCAGAACCTTGTCTGACTATAAC 75463
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATT 22436
|| ||||| |||||||| ||||| | || ||| ||||
Sbjct 75462 ATCCAAAAGGAATCCACTTTACATCTTGTCTTGAGATT 75425
Score = 141 bits (156), Expect = 8e-29
Identities = 162/218 (74%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||||||||| || ||||| || || ||||| || ||||| | ||||| ||| | ||
Sbjct 75870 ATGCAAATTTTCGTCAAAACCTTGACTGGTAAGACCATCACTTTGGAAGTCGAATCTTCC 75811
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | || | | ||| || ||||||||||| || ||||| || || || |||
Sbjct 75810 GACACCATCGATAACGTGAAATCGAAGATTCAAGACAAAGAAGGTATCCCTCCAGACCAA 75751
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||| | | || ||||| || || ||||| || ||| | ||| | ||||||||||||
Sbjct 75750 CAAAGATTAATTTTTGCAGGTAAGCAGTTGGAAGATGGAAGAACCTTGTCCGATTACAAC 75691
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATT 22436
|| |||||||||||||| | ||| | |||||| ||||
Sbjct 75690 ATCCAAAAAGAATCCACTTTGCATCTTGTTTTGAGATT 75653
Score = 136 bits (150), Expect = 3e-27
Identities = 161/218 (74%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||||||||| || ||||| ||||||||||| || ||||| | ||||| ||| | |
Sbjct 75186 ATGCAAATTTTCGTCAAAACCTTAACCGGTAAGACCATCACTTTGGAAGTTGAATCTTCT 75127
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | || | |||| || ||||||||||| || |||||||| || || |||
Sbjct 75126 GACACCATCGATAACGTCAAGTCTAAGATTCAAGACAAAGAAGGTATTCCTCCAGACCAA 75067
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||| | | || ||||| || || ||||| || ||| | | ||| | || || || |||
Sbjct 75066 CAAAGATTAATTTTTGCAGGTAAGCAGTTGGAAGATGGCAGAACCTTGTCTGACTATAAC 75007
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATT 22436
|| ||||| |||||||| ||||| | || ||| ||||
Sbjct 75006 ATCCAAAAGGAATCCACTTTACATCTTGTCTTGAGATT 74969
Score = 134 bits (148), Expect = 1e-26
Identities = 163/222 (73%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 22215 AAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAAC 22274
||| ||||||||||| ||||| |||||||| ||||| || ||||| | ||||| ||| |
Sbjct 76102 AAACATGCAAATTTTCGTTAAGACTTTAACTGGTAAGACTATCACTTTGGAAGTTGAATC 76043
Query 22275 CACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGA 22334
| || ||| | || | | ||| || ||||||||||| || ||||| || || ||
Sbjct 76042 TTCTGACACCATCGATAACGTGAAATCGAAGATTCAAGACAAAGAAGGTATCCCTCCAGA 75983
Query 22335 TCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTA 22394
|||||| | | || ||||| || || ||||| || ||| | | ||| | || || ||
Sbjct 75982 CCAACAAAGATTAATTTTTGCAGGTAAGCAGTTGGAAGATGGCAGAACCTTGTCTGACTA 75923
Query 22395 CAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATT 22436
||||| ||||| |||||||| ||||| | || ||| ||||
Sbjct 75922 TAACATCCAAAAGGAATCCACTTTACATCTTGTCTTGAGATT 75881
Score = 132 bits (146), Expect = 4e-26
Identities = 160/218 (73%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||||||||| || ||||| || || ||||| || ||||| | ||||| ||| | ||
Sbjct 75414 ATGCAAATTTTCGTCAAAACCTTGACTGGTAAGACCATCACTTTGGAAGTCGAATCTTCC 75355
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | || | | ||| || ||||||||||| || ||||| || || || |||
Sbjct 75354 GACACCATCGATAACGTGAAATCGAAGATTCAAGACAAAGAAGGTATCCCTCCAGACCAA 75295
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||| | | || ||||| || || ||||| || ||| | | ||| | || || || |||
Sbjct 75294 CAAAGATTAATTTTTGCAGGTAAGCAGTTGGAAGATGGCAGAACCTTGTCTGACTATAAC 75235
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATT 22436
|| |||||||||||||| | ||| | |||||| ||||
Sbjct 75234 ATCCAAAAAGAATCCACTTTGCATCTTGTTTTGAGATT 75197
>seq4
Length=1700866
Score = 127 bits (140), Expect = 2e-24
Identities = 165/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||||||||| || ||||| ||||| ||||| || | || | ||||| ||| | ||
Sbjct 1530870 ATGCAAATTTTCGTCAAAACCTTAACAGGTAAGACCATTACCTTGGAAGTCGAATCTTCC 1530929
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | ||| || | || || || ||||||||||| |||||||| || || |||
Sbjct 1530930 GACACCATTGACAATGTTAAGTCTAAGATCCAAGACAAGGAAGGTATTCCTCCAGACCAA 1530989
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||| | | || ||||| || || || || || ||| | || | ||||| ||||||
Sbjct 1530990 CAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTACAAC 1531049
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| ||||| |||||||| | || || || ||| ||||| | || |||
Sbjct 1531050 ATCCAAAAGGAATCCACTTTGCACTTGGTCTTGAGATTGAGAGGTGGT 1531097
>seq1
Length=1050866
Score = 127 bits (140), Expect = 2e-24
Identities = 160/220 (73%), Gaps = 0/220 (0%)
Strand=Plus/Plus
Query 22227 TTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGT 22286
||| || || || || || ||||| || ||||| | ||||| ||| | |||| ||| |
Sbjct 59642 TTTCGTCAAGACCTTGACTGGTAAGACCATCACTTTGGAAGTCGAATCTTCCGACACCAT 59701
Query 22287 GGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCT 22346
||| || |||| || |||||||||||||| ||||| ||||| || |||||| | |
Sbjct 59702 TGACAATGTCAAGTCTAAGATTCAAGACAAGGAAGGTATCCCACCAGACCAACAAAGATT 59761
Query 22347 TATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAA 22406
|| ||||| || || || || || ||| | ||| | || || |||||||| |||||
Sbjct 59762 GATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACCTTGTCTGACTACAACATCCAAAA 59821
Query 22407 AGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|||||||| | || || |||||| ||||| | || |||
Sbjct 59822 GGAATCCACTTTGCACTTGGTTTTGAGATTGAGAGGTGGT 59861
>seq3
Length=1752996
Score = 105 bits (116), Expect = 6e-18
Identities = 700/1111 (63%), Gaps = 40/1111 (4%)
Strand=Plus/Plus
Query 128776 GACTTGTCCACGGTAAATTTAATAGCGTCCGCTGCCGGCTTG-GTGCGCAAATAGTACAT 128834
||||| || | ||||||| ||| || | | ||| | |||| || | | ||||||||
Sbjct 675413 GACTTATCGATAGTAAATTGAATTGCAGCAGATGCAG-CTTGTGTTCTTAGGTAGTACAT 675471
Query 128835 GCCTGTTTTCAAACCGCTTTTCCAAGTGTGCATGTGAATCGTGGTCAACAATGCGTAGGT 128894
|| || |||||||| ||||||| || | || || | || ||| | |||
Sbjct 675472 ACCAGTCTTCAAACCCTTTTTCCATCCGTAGAAATGCATGGAAGTTAACTTACCCATGGT 675531
Query 128895 GGGTTGACTCaaaaaaaTATTAAATGATTGACTTTGATCAATAAAGGGGCCGCGATCGGC 128954
||| || | | ||||| || |||||| ||||||||| | | | || |||||
Sbjct 675532 TGGTGCACGAATATGGATATTTAAGGATTGAGATTGATCAATGTAAGCAGCACGGTCGGC 675591
Query 128955 AGCCATACCAATCAAAT--TTTTCACTTTCATTTCCCACACCGTTTTGTAAAGCTCTCTC 129012
||||| | || | || |||| | || |||||| || || ||||| || || ||
Sbjct 675592 CGCCATGTCGATAATATGCTTTTGAGA--CAATTCCCAAACAGTCTTGTATAGGTCCTTC 675649
Query 129013 ACGTGTTTTGGTATTTCTTCAATGTTCTGCACGCTGCCGTTGTTTGCAATAATTTTGTTT 129072
| | || ||| || | | | |||||| | | || |||| |||||||| | |
Sbjct 675650 AATTCTTGTGGGATATTTGGTAAGTTCTGAATGGAACCATTGTCGGCAATAATATGAGAT 675709
Query 129073 CGCATCTGTTCGTTGTACAAATTCAGTTTGATCAAATCGTCGGTCAAGTATTTGTTTATT 129132
||| ||| | | | | || | | ||| || | |||||| ||| |
Sbjct 675710 TTCATAGCTTCATCCCAAATACCCAAGTCAACCAAGTCATGCAATAAGTATGGGTTGACA 675769
Query 129133 ACTTGAAAGTCACCCGCCAAAACGCGCCGAACGTAAATGTTGTTGGTGAACGGCTCAAAC 129192
| ||| || ||||| | |||||| || ||| ||| |||||| ||| | || |||||
Sbjct 675770 ATTTGGAACTCACCAGACAAAACACGACGAGAGTACATGTTGGATGTGTATGGTTCAAAA 675829
Query 129193 GATTCATTGTTGCCTAATATTTGAGCCGTTGTCGCGGTGGGCATGTAAGCCACGCAAAGC 129252
|||| |||| || || ||||||| || | || || ||||| ||| || | |
Sbjct 675830 CATTCGTTGTAACCCAAAATTTGAGATGTGGATGCTGTTGGCATTGGAGCAACCAACAAT 675889
Query 129253 GAGTTTCGCAAACCGTGCTGTTTAATGTCtttttttAATTGTGTCCAGTCCCACATCGAT 129312
||||||| || ||| | | || || | || ||| || |||||||||| | |
Sbjct 675890 GAGTTTCTCATACCATTCAACTTGATTTGTTCTTTCAAAGTATTCCAGTCCCATAGAGCA 675949
Query 129313 GTGGGTGTGTGATTCCACAAGTCGTATTGCAATATACCCAAACTGGCGGGACTGGAAAAG 129372
|| ||||| | | ||| || ||| |||||||| ||| | || ||| ||
Sbjct 675950 GTTGGTGTCTTACCCCATAAATCGAATTGCAATTGACCTTGAGATGCAGGAG----AACC 676005
Query 129373 TAGGAATCGTGCAC----GCCGTAAGCTTTTGCCAATTC---GCAACTCGCTTCCAATGC 129425
| ||||| | || ||| | |||| |||||||| | || ||||| | ||
Sbjct 676006 TGGGAATGTTTCATAATGGCCTTCTTCTTTGGCCAATTCCATGGAA---GCTTCGCAGGC 676062
Query 129426 GCCAAAATAAATTGTTTCGGCAATTTTGGTGTTCAACACTTTGGCCTGGTCGCTTTCGTA 129485
||| ||||| |||||| |||| |||||| || || | || || |
Sbjct 676063 ACCATGGTAAATGGTTTCGAAGATTTCAATGTTCAGTTTCTTAGCTTCTTCAGAATCAAA 676122
Query 129486 CGGCATACGCAACATGGCAAATGTGTCGGCCAAACCTTGAATACCCACACCGATGGGTCG 129545
|||| ||||||||| ||| | |||||| | |||||| | ||||| | | || ||||
Sbjct 676123 TGGCAAACGCAACATCATAAAAGCGTCGGCTAGACCTTGGACACCCAAAGCAATAGGTCT 676182
Query 129546 ATGTTTTCTATTGGATTTTTGTGCCGA--CAACAAGGGATAGTAGTTGATGTCTATAATT 129603
||| | | || ||| || || | |||| || || ||||| |||||| |||
Sbjct 676183 GTGTCTCATGTTCGATCTTCTAGCGGTTTCAACTGGG--TAATAGTTACGGTCTATGATT 676240
Query 129604 TTGTTTAAATT-CTTGACCACAATTTTCGTTACGTATTTTAACATTTCAAAATTGTAC-T 129661
|||| || || | || | | || | | | | || | | ||||| ||||| |
Sbjct 676241 CTGTTCAAGTTGCGTGTT-AGTACCTTAGCGATGCTGTGTAGCTTCTCAAAGTTGTATGT 676299
Query 129662 C-GCCTACATCGAT--GTCGACAAATTGATTGACAC-----AA----ATCGAGGCCAAAT 129709
| | | || | || ||| || | ||| | || || || ||||| |
Sbjct 676300 CTGAGTTTTTCCGTCGGTAGACCT-TTCAATGAAAGCTGGTAACGCGATGGAAGCCAAGT 676358
Query 129710 TGCAGACGGCACTTTCGTTTTTGTCACTGTACTCGACAATTTCGGCGCACAAATTACTAT 129769
| || ||||| |||| | |||| || ||||||||||| ||||| || |
Sbjct 676359 TACAAACGGCGGTTTCTGTAGGGTCAGAATATTCGACAATTTCACAACACAAGTTTGAAG 676418
Query 129770 TTTTAATGGTGCCCAAATGCTTTTGATTACTTTTCATGTTGCAAGCATCTTTGTACATCA 129829
|||||||| |||| | ||||||||| || |||| ||| |||||||| ||||| | ||
Sbjct 676419 ACTTAATGGTACCCAGGTTCTTTTGATTGCTCTTCAAGTTACAAGCATCCTTGTAAAGCA 676478
Query 129830 TGTACGGCGTGCCCGTTTCGACTTGCGTTTC 129860
|| |||| || || ||||| ||||| |||
Sbjct 676479 TGAACGGAGTACCTGTTTCTGTTTGCGCTTC 676509
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419727964191955
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |