Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20lactis_20[genbank_20GCA_5F002151565.1_202017-05-19]
7 sequences; 10,682,662 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq5 187 5e-42
seq1 179 7e-40
seq4 178 2e-39
>seq5
Length=2217437
Score = 187 bits (206), Expect = 5e-42
Identities = 167/208 (80%), Gaps = 1/208 (0%)
Strand=Plus/Plus
Query 68255 CAAG-TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTA 68313
|||| |||| ||||| || |||||||||||||| || || | || || |||||||| |
Sbjct 74979 CAAGATGTAAAGTGGATTCCTTTTGGATGTTATAGTCAGACAAGGTTCTGCCATCTTCCA 75038
Query 68314 ACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAA 68373
||||||| || || || || | |||||||||||| || ||||| ||||| ||||||||||
Sbjct 75039 ACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAGGAATACCTTCTTTGTCTTGAA 75098
Query 68374 TCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTC 68433
|||| | ||||||| ||||||||||| | ||||| |||||||| |||||||| || |
Sbjct 75099 TCTTAGACTTGACGTTATCGATGGTGTCAGAAGATTCAACTTCCAAAGTGATGGTCTTAC 75158
Query 68434 CCGTGAGGGTCTTGACGAATATCTGCAT 68461
| || | ||| |||||||| || |||||
Sbjct 75159 CGGTTAAGGTTTTGACGAAAATTTGCAT 75186
Score = 183 bits (202), Expect = 6e-41
Identities = 166/208 (80%), Gaps = 1/208 (0%)
Strand=Plus/Plus
Query 68255 CAAG-TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTA 68313
|||| |||| ||||| || |||||||||||||| || || | || || | |||||| |
Sbjct 75435 CAAGATGTAAAGTGGATTCCTTTTGGATGTTATAGTCAGACAAGGTTCTGCTATCTTCCA 75494
Query 68314 ACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAA 68373
||||||| || || || || | |||||||||||| || ||||| ||||| ||||||||||
Sbjct 75495 ACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAGGAATACCTTCTTTGTCTTGAA 75554
Query 68374 TCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTC 68433
|||| | ||||||| ||||||||||| | ||||| |||||||| |||||||| || |
Sbjct 75555 TCTTAGACTTGACGTTATCGATGGTGTCGGAAGATTCGACTTCCAAAGTGATGGTCTTAC 75614
Query 68434 CCGTGAGGGTCTTGACGAATATCTGCAT 68461
| || | ||| |||||||| || |||||
Sbjct 75615 CGGTTAAGGTTTTGACGAAAATTTGCAT 75642
Score = 179 bits (198), Expect = 7e-40
Identities = 158/197 (80%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 68265 GTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCG 68324
||||| |||||||||||||| |||||||| | || || |||||||| |||||||| ||
Sbjct 75674 GTGGATTCTTTTTGGATGTTGTAATCGGACAAGGTTCTTCCATCTTCCAACTGCTTACCT 75733
Query 68325 GCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTG 68384
|| || || | |||||||||||| || || || ||||| |||||||||||||| | ||
Sbjct 75734 GCAAAAATTAATCTTTGTTGGTCTGGAGGGATACCTTCTTTGTCTTGAATCTTCGATTTC 75793
Query 68385 ACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTC 68444
||| ||||||||||| | ||||| |||||||| |||||||| || || || | |||
Sbjct 75794 ACGTTATCGATGGTGTCGGAAGATTCGACTTCCAAAGTGATGGTCTTACCAGTCAAGGTT 75853
Query 68445 TTGACGAATATCTGCAT 68461
|||||||| || |||||
Sbjct 75854 TTGACGAAAATTTGCAT 75870
Score = 176 bits (194), Expect = 8e-39
Identities = 157/197 (80%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 68265 GTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCG 68324
||||| ||||||||||||||||| || || | || || |||||||| |||||||| ||
Sbjct 75218 GTGGATTCTTTTTGGATGTTATAGTCAGACAAGGTTCTGCCATCTTCCAACTGCTTACCT 75277
Query 68325 GCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTG 68384
|| || || | |||||||||||| || || || ||||| |||||||||||||| | ||
Sbjct 75278 GCAAAAATTAATCTTTGTTGGTCTGGAGGGATACCTTCTTTGTCTTGAATCTTCGATTTC 75337
Query 68385 ACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTC 68444
||| ||||||||||| | ||||| |||||||| |||||||| || || || | |||
Sbjct 75338 ACGTTATCGATGGTGTCGGAAGATTCGACTTCCAAAGTGATGGTCTTACCAGTCAAGGTT 75397
Query 68445 TTGACGAATATCTGCAT 68461
|||||||| || |||||
Sbjct 75398 TTGACGAAAATTTGCAT 75414
Score = 165 bits (182), Expect = 2e-35
Identities = 162/208 (78%), Gaps = 1/208 (0%)
Strand=Plus/Plus
Query 68255 CAAG-TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTA 68313
|||| |||| ||||| || |||||||||||||| || || | || || |||||||| |
Sbjct 75891 CAAGATGTAAAGTGGATTCCTTTTGGATGTTATAGTCAGACAAGGTTCTGCCATCTTCCA 75950
Query 68314 ACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAA 68373
||||||| || || || || | |||||||||||| || || || ||||| ||||||||||
Sbjct 75951 ACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAGGGATACCTTCTTTGTCTTGAA 76010
Query 68374 TCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTC 68433
|||| | || ||| ||||||||||| | ||||| |||||||| ||||| || || |
Sbjct 76011 TCTTCGATTTCACGTTATCGATGGTGTCAGAAGATTCAACTTCCAAAGTGATAGTCTTAC 76070
Query 68434 CCGTGAGGGTCTTGACGAATATCTGCAT 68461
| || | ||||| ||||| || |||||
Sbjct 76071 CAGTTAAAGTCTTAACGAAAATTTGCAT 76098
>seq1
Length=1050866
Score = 179 bits (198), Expect = 7e-40
Identities = 162/204 (79%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| |||||||| | ||||| || ||||||||||| || || || | || || |||||
Sbjct 59846 CAAAACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCATC 59787
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
||| || ||||| || || || || | |||||||||||| ||||| || |||||||||||
Sbjct 59786 TTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGGATACCTTCCTTGTC 59727
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
||||||||| | |||||| || |||||||| | ||||| |||||||| ||||||||
Sbjct 59726 TTGAATCTTAGACTTGACATTGTCAATGGTGTCGGAAGATTCGACTTCCAAAGTGATGGT 59667
Query 68429 TTTTCCCGTGAGGGTCTTGACGAA 68452
|| || || | ||||||||||||
Sbjct 59666 CTTACCAGTCAAGGTCTTGACGAA 59643
>seq4
Length=1700866
Score = 178 bits (196), Expect = 2e-39
Identities = 167/213 (78%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| |||||||| | ||||| || ||||||||||| || ||||| | || || |||||
Sbjct 1531082 CAAGACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACCATC 1531023
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
||| || ||||| || || || || | |||||||||||| || ||||| |||||||||||
Sbjct 1531022 TTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTTGTC 1530963
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
||| ||||| | ||| || || |||||||| | ||||| ||||||||||| |||||
Sbjct 1530962 TTGGATCTTAGACTTAACATTGTCAATGGTGTCGGAAGATTCGACTTCCAAGGTAATGGT 1530903
Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || || | ||| |||||||| || |||||
Sbjct 1530902 CTTACCTGTTAAGGTTTTGACGAAAATTTGCAT 1530870
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921622319358040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |