Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20lactis_20[genbank_20GCA_5F002151565.1_202017-05-19]
7 sequences; 10,682,662 total letters
Query= NC_011423.1
Length=111724
Score E
Sequences producing significant alignments: (Bits) Value
seq4 125 5e-24
seq5 107 1e-18
seq1 100 2e-16
>seq4
Length=1700866
Score = 125 bits (138), Expect = 5e-24
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
||||||| |||||| || || || || | || || || ||||| |||||||| |||
Sbjct 1531096 CCACCTCTCAATCTCAAGACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCGGAC 1531037
Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069
| | |||| | ||||| ||||| || ||||| | ||||| | |||||||| |||
Sbjct 1531036 AAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGAGGA 1530977
Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129
|| ||||||||||| || || || ||| | || || || ||| | ||| ||
Sbjct 1530976 ATACCTTCCTTGTCTTGGATCTTAGACTTAACATTGTCAATGGTGTCGGAAGATTCGACT 1530917
Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176
|| ||||||||||| |||||||| | ||||| || |||||||||||
Sbjct 1530916 TCCAAGGTAATGGTCTTACCTGTTAAGGTTTTGACGAAAATTTGCAT 1530870
>seq5
Length=2217437
Score = 107 bits (118), Expect = 1e-18
Identities = 163/230 (71%), Gaps = 4/230 (2%)
Strand=Plus/Plus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
||||||| ||||| ||||| | ||| | || || |||||||| |||||||||||| |
Sbjct 75644 CCACCTCTTAATCTCAAAACAAGATGCAAAGTGGATTCTTTTTGGATGTTGTAATCG--G 75701
Query 15010 AGAA--TTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067
| || |||| | ||||| || || || || || | || || | |||||||| |
Sbjct 75702 ACAAGGTTCTTCCATCTTCCAACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAG 75761
Query 15068 GAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127
| || ||||| ||||| ||| || ||| || | || || || ||| | ||| |
Sbjct 75762 GGATACCTTCTTTGTCTTGAATCTTCGATTTCACGTTATCGATGGTGTCGGAAGATTCGA 75821
Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177
| || || || ||||| ||||| |||| ||||| || ||||||||||||
Sbjct 75822 CTTCCAAAGTGATGGTCTTACCAGTCAAGGTTTTGACGAAAATTTGCATA 75871
Score = 95.1 bits (104), Expect = 9e-15
Identities = 160/230 (70%), Gaps = 4/230 (2%)
Strand=Plus/Plus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
||||||| ||||| ||||| | ||| | || || |||||||| ||||| || || |
Sbjct 75188 CCACCTCTTAATCTCAAAACAAGATGCAAAGTGGATTCTTTTTGGATGTTATAGTCA--G 75245
Query 15010 AGAA--TTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067
| || |||| | ||||| || || || || || | || || | |||||||| |
Sbjct 75246 ACAAGGTTCTGCCATCTTCCAACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAG 75305
Query 15068 GAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127
| || ||||| ||||| ||| || ||| || | || || || ||| | ||| |
Sbjct 75306 GGATACCTTCTTTGTCTTGAATCTTCGATTTCACGTTATCGATGGTGTCGGAAGATTCGA 75365
Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177
| || || || ||||| ||||| |||| ||||| || ||||||||||||
Sbjct 75366 CTTCCAAAGTGATGGTCTTACCAGTCAAGGTTTTGACGAAAATTTGCATA 75415
>seq1
Length=1050866
Score = 100 bits (110), Expect = 2e-16
Identities = 156/221 (71%), Gaps = 4/221 (2%)
Strand=Plus/Minus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
||||||| |||||| ||||| || || | || || || ||||| |||||||| || |
Sbjct 59860 CCACCTCTCAATCTCAAAACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCA--G 59803
Query 15010 AGAA--TTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067
| || |||| | ||||| ||||| || ||||| | ||||| | |||||||| ||
Sbjct 59802 ACAAGGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTG 59743
Query 15068 GAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127
| || ||||||||||| ||| || || ||| | || || || ||| | ||| |
Sbjct 59742 GGATACCTTCCTTGTCTTGAATCTTAGACTTGACATTGTCAATGGTGTCGGAAGATTCGA 59683
Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAA 15168
| || || || ||||| ||||| |||| || || || |||
Sbjct 59682 CTTCCAAAGTGATGGTCTTACCAGTCAAGGTCTTGACGAAA 59642
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 357391969509995
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |