Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20lactis_20[genbank_20GCA_5F002151565.1_202017-05-19] 7 sequences; 10,682,662 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq5 143 2e-29 seq4 123 2e-23 seq1 104 2e-17 >seq5 Length=2217437 Score = 143 bits (158), Expect = 2e-29 Identities = 163/216 (75%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 ||||| || ||||| | || |||||||||||||| ||||| || | |||| | | Sbjct 75428 CTCAAGACAAGATGTAAAGTGGATTCCTTTTGGATGTTATAGTCAGACAAGGTTCTGCTA 75487 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || ||||| || || ||||| | || |||| ||| ||||| || ||||| |||||||| Sbjct 75488 TCTTCCAACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAGGAATACCTTCTTTG 75547 Query 45246 TCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304 |||||||| || |||| || | || | |||||||||||| |||||||| | ||| | Sbjct 75548 TCTTGAATCTTAGACTTGA-CGTTATCGATGGTGTCGGAAGATTCGACTTCCAAAGTGAT 75606 Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || ||||||| ||||| || ||||||||||| Sbjct 75607 GGTCTTACCGGTTAAGGTTTTGACGAAAATTTGCAT 75642 Score = 134 bits (148), Expect = 1e-26 Identities = 161/216 (75%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 ||||| || ||||| | || |||||||||||||| ||||| || | |||| | | Sbjct 74972 CTCAAGACAAGATGTAAAGTGGATTCCTTTTGGATGTTATAGTCAGACAAGGTTCTGCCA 75031 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || ||||| || || ||||| | || |||| ||| ||||| || ||||| |||||||| Sbjct 75032 TCTTCCAACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAGGAATACCTTCTTTG 75091 Query 45246 TCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304 |||||||| || |||| || | || | |||||| ||||| || ||||| | ||| | Sbjct 75092 TCTTGAATCTTAGACTTGA-CGTTATCGATGGTGTCAGAAGATTCAACTTCCAAAGTGAT 75150 Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || ||||||| ||||| || ||||||||||| Sbjct 75151 GGTCTTACCGGTTAAGGTTTTGACGAAAATTTGCAT 75186 Score = 134 bits (148), Expect = 1e-26 Identities = 161/216 (75%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 ||||| || ||||||| || ||||| |||||||| || |||||| | |||| | | Sbjct 75656 CTCAAAACAAGATGCAAAGTGGATTCTTTTTGGATGTTGTAATCGGACAAGGTTCTTCCA 75715 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || ||||| || || ||||| | || |||| ||| ||||| || || || |||||||| Sbjct 75716 TCTTCCAACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAGGGATACCTTCTTTG 75775 Query 45246 TCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304 |||||||| || ||| | || | || | |||||||||||| |||||||| | ||| | Sbjct 75776 TCTTGAATCTTCGATTTCA-CGTTATCGATGGTGTCGGAAGATTCGACTTCCAAAGTGAT 75834 Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || || | ||||| || ||||||||||| Sbjct 75835 GGTCTTACCAGTCAAGGTTTTGACGAAAATTTGCAT 75870 Score = 131 bits (144), Expect = 2e-25 Identities = 160/216 (74%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 ||||| || ||||||| || ||||| |||||||| ||||| || | |||| | | Sbjct 75200 CTCAAAACAAGATGCAAAGTGGATTCTTTTTGGATGTTATAGTCAGACAAGGTTCTGCCA 75259 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || ||||| || || ||||| | || |||| ||| ||||| || || || |||||||| Sbjct 75260 TCTTCCAACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAGGGATACCTTCTTTG 75319 Query 45246 TCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304 |||||||| || ||| | || | || | |||||||||||| |||||||| | ||| | Sbjct 75320 TCTTGAATCTTCGATTTCA-CGTTATCGATGGTGTCGGAAGATTCGACTTCCAAAGTGAT 75378 Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || || | ||||| || ||||||||||| Sbjct 75379 GGTCTTACCAGTCAAGGTTTTGACGAAAATTTGCAT 75414 Score = 125 bits (138), Expect = 6e-24 Identities = 159/216 (74%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 ||||| || ||||| | || |||||||||||||| ||||| || | |||| | | Sbjct 75884 CTCAAGACAAGATGTAAAGTGGATTCCTTTTGGATGTTATAGTCAGACAAGGTTCTGCCA 75943 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || ||||| || || ||||| | || |||| ||| ||||| || || || |||||||| Sbjct 75944 TCTTCCAACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAGGGATACCTTCTTTG 76003 Query 45246 TCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304 |||||||| || ||| | || | || | |||||| ||||| || ||||| | ||| | Sbjct 76004 TCTTGAATCTTCGATTTCA-CGTTATCGATGGTGTCAGAAGATTCAACTTCCAAAGTGAT 76062 Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || |||| ||| || || ||||||||||| Sbjct 76063 AGTCTTACCAGTTAAAGTCTTAACGAAAATTTGCAT 76098 >seq4 Length=1700866 Score = 123 bits (136), Expect = 2e-23 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 ||||| || | |||| || |||||||||||||| || || ||| | ||| || | Sbjct 1531084 CTCAAGACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACCA 1531025 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || |||||||| || || || | ||||||| ||| ||||| || ||||| ||||| || Sbjct 1531024 TCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTTG 1530965 Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305 ||||| || || || | || | |||||||||||| |||||||| | |||| Sbjct 1530964 TCTTGGATCTTAGACTTAACATTGTCAATGGTGTCGGAAGATTCGACTTCCAAGGTAATG 1530905 Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATCGC 45343 || || || |||| ||||| || ||||||||||| || Sbjct 1530904 GTCTTACCTGTTAAGGTTTTGACGAAAATTTGCATGGC 1530867 >seq1 Length=1050866 Score = 104 bits (114), Expect = 2e-17 Identities = 147/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 ||||| || | |||| || |||||||||||||| || || || | |||| || | Sbjct 59848 CTCAAAACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCA 59789 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || |||||||| || || || | ||||||| ||| ||||| || || || ||||| || Sbjct 59788 TCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGGATACCTTCCTTG 59729 Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305 |||||||| || |||| || | |||||||||||| |||||||| | ||| | Sbjct 59728 TCTTGAATCTTAGACTTGACATTGTCAATGGTGTCGGAAGATTCGACTTCCAAAGTGATG 59669 Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAA 45332 || || || || | || || || ||| Sbjct 59668 GTCTTACCAGTCAAGGTCTTGACGAAA 59642 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 452003160449720