Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20lactis_20[genbank_20GCA_5F002151565.1_202017-05-19]
7 sequences; 10,682,662 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq5 143 2e-29
seq4 123 2e-23
seq1 104 2e-17
>seq5
Length=2217437
Score = 143 bits (158), Expect = 2e-29
Identities = 163/216 (75%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
||||| || ||||| | || |||||||||||||| ||||| || | |||| | |
Sbjct 75428 CTCAAGACAAGATGTAAAGTGGATTCCTTTTGGATGTTATAGTCAGACAAGGTTCTGCTA 75487
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| ||||| || || ||||| | || |||| ||| ||||| || ||||| ||||||||
Sbjct 75488 TCTTCCAACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAGGAATACCTTCTTTG 75547
Query 45246 TCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304
|||||||| || |||| || | || | |||||||||||| |||||||| | ||| |
Sbjct 75548 TCTTGAATCTTAGACTTGA-CGTTATCGATGGTGTCGGAAGATTCGACTTCCAAAGTGAT 75606
Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || ||||||| ||||| || |||||||||||
Sbjct 75607 GGTCTTACCGGTTAAGGTTTTGACGAAAATTTGCAT 75642
Score = 134 bits (148), Expect = 1e-26
Identities = 161/216 (75%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
||||| || ||||| | || |||||||||||||| ||||| || | |||| | |
Sbjct 74972 CTCAAGACAAGATGTAAAGTGGATTCCTTTTGGATGTTATAGTCAGACAAGGTTCTGCCA 75031
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| ||||| || || ||||| | || |||| ||| ||||| || ||||| ||||||||
Sbjct 75032 TCTTCCAACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAGGAATACCTTCTTTG 75091
Query 45246 TCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304
|||||||| || |||| || | || | |||||| ||||| || ||||| | ||| |
Sbjct 75092 TCTTGAATCTTAGACTTGA-CGTTATCGATGGTGTCAGAAGATTCAACTTCCAAAGTGAT 75150
Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || ||||||| ||||| || |||||||||||
Sbjct 75151 GGTCTTACCGGTTAAGGTTTTGACGAAAATTTGCAT 75186
Score = 134 bits (148), Expect = 1e-26
Identities = 161/216 (75%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
||||| || ||||||| || ||||| |||||||| || |||||| | |||| | |
Sbjct 75656 CTCAAAACAAGATGCAAAGTGGATTCTTTTTGGATGTTGTAATCGGACAAGGTTCTTCCA 75715
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| ||||| || || ||||| | || |||| ||| ||||| || || || ||||||||
Sbjct 75716 TCTTCCAACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAGGGATACCTTCTTTG 75775
Query 45246 TCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304
|||||||| || ||| | || | || | |||||||||||| |||||||| | ||| |
Sbjct 75776 TCTTGAATCTTCGATTTCA-CGTTATCGATGGTGTCGGAAGATTCGACTTCCAAAGTGAT 75834
Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || || || | ||||| || |||||||||||
Sbjct 75835 GGTCTTACCAGTCAAGGTTTTGACGAAAATTTGCAT 75870
Score = 131 bits (144), Expect = 2e-25
Identities = 160/216 (74%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
||||| || ||||||| || ||||| |||||||| ||||| || | |||| | |
Sbjct 75200 CTCAAAACAAGATGCAAAGTGGATTCTTTTTGGATGTTATAGTCAGACAAGGTTCTGCCA 75259
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| ||||| || || ||||| | || |||| ||| ||||| || || || ||||||||
Sbjct 75260 TCTTCCAACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAGGGATACCTTCTTTG 75319
Query 45246 TCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304
|||||||| || ||| | || | || | |||||||||||| |||||||| | ||| |
Sbjct 75320 TCTTGAATCTTCGATTTCA-CGTTATCGATGGTGTCGGAAGATTCGACTTCCAAAGTGAT 75378
Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || || || | ||||| || |||||||||||
Sbjct 75379 GGTCTTACCAGTCAAGGTTTTGACGAAAATTTGCAT 75414
Score = 125 bits (138), Expect = 6e-24
Identities = 159/216 (74%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
||||| || ||||| | || |||||||||||||| ||||| || | |||| | |
Sbjct 75884 CTCAAGACAAGATGTAAAGTGGATTCCTTTTGGATGTTATAGTCAGACAAGGTTCTGCCA 75943
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| ||||| || || ||||| | || |||| ||| ||||| || || || ||||||||
Sbjct 75944 TCTTCCAACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAGGGATACCTTCTTTG 76003
Query 45246 TCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304
|||||||| || ||| | || | || | |||||| ||||| || ||||| | ||| |
Sbjct 76004 TCTTGAATCTTCGATTTCA-CGTTATCGATGGTGTCAGAAGATTCAACTTCCAAAGTGAT 76062
Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || || |||| ||| || || |||||||||||
Sbjct 76063 AGTCTTACCAGTTAAAGTCTTAACGAAAATTTGCAT 76098
>seq4
Length=1700866
Score = 123 bits (136), Expect = 2e-23
Identities = 158/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
||||| || | |||| || |||||||||||||| || || ||| | ||| || |
Sbjct 1531084 CTCAAGACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACCA 1531025
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| |||||||| || || || | ||||||| ||| ||||| || ||||| ||||| ||
Sbjct 1531024 TCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTTG 1530965
Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305
||||| || || || | || | |||||||||||| |||||||| | ||||
Sbjct 1530964 TCTTGGATCTTAGACTTAACATTGTCAATGGTGTCGGAAGATTCGACTTCCAAGGTAATG 1530905
Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATCGC 45343
|| || || |||| ||||| || ||||||||||| ||
Sbjct 1530904 GTCTTACCTGTTAAGGTTTTGACGAAAATTTGCATGGC 1530867
>seq1
Length=1050866
Score = 104 bits (114), Expect = 2e-17
Identities = 147/207 (71%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
||||| || | |||| || |||||||||||||| || || || | |||| || |
Sbjct 59848 CTCAAAACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCA 59789
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| |||||||| || || || | ||||||| ||| ||||| || || || ||||| ||
Sbjct 59788 TCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGGATACCTTCCTTG 59729
Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305
|||||||| || |||| || | |||||||||||| |||||||| | ||| |
Sbjct 59728 TCTTGAATCTTAGACTTGACATTGTCAATGGTGTCGGAAGATTCGACTTCCAAAGTGATG 59669
Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAA 45332
|| || || || | || || || |||
Sbjct 59668 GTCTTACCAGTCAAGGTCTTGACGAAA 59642
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 452003160449720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |