Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20lactis_20[genbank_20GCA_5F002151565.1_202017-05-19] 7 sequences; 10,682,662 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq5 143 2e-29 seq4 129 5e-25 seq1 114 1e-20 >seq5 Length=2217437 Score = 143 bits (158), Expect = 2e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || |||||||| | ||||| | ||| | || ||||||||||| || |||||||||| Sbjct 75644 CCACCTCTTAATCTCAAAACAAGATGCAAAGTGGATTCTTTTTGGATGTTGTAATCGGAC 75703 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | ||||| |||| ||||| |||||||||||||| || || | ||||| || || || Sbjct 75704 AAGGTTCTTCCATCTTCCAACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAGGG 75763 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || |||||||| |||||||| || ||| || | || | ||||| || | ||| ||| Sbjct 75764 ATACCTTCTTTGTCTTGAATCTTCGATTTCACGTTATCGATGGTGTCGGAAGATTCGACT 75823 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || | ||||| || || || || || ||||| || || || ||||| Sbjct 75824 TCCAAAGTGATGGTCTTACCAGTCAAGGTTTTGACGAAAATTTGCAT 75870 Score = 140 bits (154), Expect = 3e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || |||||||| | || || | ||| | || ||||| ||||| || || || || | Sbjct 74960 CCACCTCTTAATCTCAAGACAAGATGTAAAGTGGATTCCTTTTGGATGTTATAGTCAGAC 75019 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | |||||| |||| ||||| |||||||||||||| || || | ||||| || || ||| Sbjct 75020 AAGGTTCTGCCATCTTCCAACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAGGA 75079 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || |||||||| |||||||| || || || | || | |||||||| | ||| ||| Sbjct 75080 ATACCTTCTTTGTCTTGAATCTTAGACTTGACGTTATCGATGGTGTCAGAAGATTCAACT 75139 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || | ||||| || || |||||||| ||||| || || || ||||| Sbjct 75140 TCCAAAGTGATGGTCTTACCGGTTAAGGTTTTGACGAAAATTTGCAT 75186 Score = 138 bits (152), Expect = 9e-28 Identities = 169/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || |||||||| | || || | ||| | || ||||| ||||| || || || || | Sbjct 75872 CCACCTCTTAATCTCAAGACAAGATGTAAAGTGGATTCCTTTTGGATGTTATAGTCAGAC 75931 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | |||||| |||| ||||| |||||||||||||| || || | ||||| || || || Sbjct 75932 AAGGTTCTGCCATCTTCCAACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAGGG 75991 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || |||||||| |||||||| || ||| || | || | |||||||| | ||| ||| Sbjct 75992 ATACCTTCTTTGTCTTGAATCTTCGATTTCACGTTATCGATGGTGTCAGAAGATTCAACT 76051 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATGGTT 101473 || | ||||| || || || |||||||| || || || || |||||| || Sbjct 76052 TCCAAAGTGATAGTCTTACCAGTTAAAGTCTTAACGAAAATTTGCATGTTT 76102 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || |||||||| | ||||| | ||| | || ||||||||||| || || || || | Sbjct 75188 CCACCTCTTAATCTCAAAACAAGATGCAAAGTGGATTCTTTTTGGATGTTATAGTCAGAC 75247 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | |||||| |||| ||||| |||||||||||||| || || | ||||| || || || Sbjct 75248 AAGGTTCTGCCATCTTCCAACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAGGG 75307 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || |||||||| |||||||| || ||| || | || | ||||| || | ||| ||| Sbjct 75308 ATACCTTCTTTGTCTTGAATCTTCGATTTCACGTTATCGATGGTGTCGGAAGATTCGACT 75367 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || | ||||| || || || || || ||||| || || || ||||| Sbjct 75368 TCCAAAGTGATGGTCTTACCAGTCAAGGTTTTGACGAAAATTTGCAT 75414 Score = 131 bits (144), Expect = 1e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || |||||||| | || || | ||| | || ||||| ||||| || || || || | Sbjct 75416 CCACCTCTTAATCTCAAGACAAGATGTAAAGTGGATTCCTTTTGGATGTTATAGTCAGAC 75475 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | |||||| ||| ||||| |||||||||||||| || || | ||||| || || ||| Sbjct 75476 AAGGTTCTGCTATCTTCCAACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAGGA 75535 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || |||||||| |||||||| || || || | || | ||||| || | ||| ||| Sbjct 75536 ATACCTTCTTTGTCTTGAATCTTAGACTTGACGTTATCGATGGTGTCGGAAGATTCGACT 75595 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || | ||||| || || |||||||| ||||| || || || ||||| Sbjct 75596 TCCAAAGTGATGGTCTTACCGGTTAAGGTTTTGACGAAAATTTGCAT 75642 >seq4 Length=1700866 Score = 129 bits (142), Expect = 5e-25 Identities = 166/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || ||||| || | || || || || | || ||||| ||||| || ||||| |||| Sbjct 1531096 CCACCTCTCAATCTCAAGACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCGGAC 1531037 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | |||||| |||| |||||||||||||| ||||| ||||| | ||||| || || ||| Sbjct 1531036 AAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGAGGA 1530977 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || ||||| || ||||| || || || ||| | || | ||||| || | ||| ||| Sbjct 1530976 ATACCTTCCTTGTCTTGGATCTTAGACTTAACATTGTCAATGGTGTCGGAAGATTCGACT 1530917 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATGG 101471 || | || | || || || ||||| ||||| || || || ||||||| Sbjct 1530916 TCCAAGGTAATGGTCTTACCTGTTAAGGTTTTGACGAAAATTTGCATGG 1530868 >seq1 Length=1050866 Score = 114 bits (126), Expect = 1e-20 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || ||||| || | ||||| || || | || ||||| ||||| || ||||| || | Sbjct 59860 CCACCTCTCAATCTCAAAACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCAGAC 59801 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | ||||| |||| |||||||||||||| ||||| ||||| | ||||| || || || Sbjct 59800 AAGGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGG 59741 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || ||||| || |||||||| || || ||| | || | ||||| || | ||| ||| Sbjct 59740 ATACCTTCCTTGTCTTGAATCTTAGACTTGACATTGTCAATGGTGTCGGAAGATTCGACT 59681 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAA 101460 || | ||||| || || || || || || || || || Sbjct 59680 TCCAAAGTGATGGTCTTACCAGTCAAGGTCTTGACGAA 59643 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396278366192499