Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20lactis_20[genbank_20GCA_5F002151565.1_202017-05-19] 7 sequences; 10,682,662 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq4 134 1e-26 seq1 98.7 8e-16 seq5 96.9 3e-15 >seq4 Length=1700866 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||| || || ||||| ||||| ||||| ||||||||| ||| ||| |||| Sbjct 1530870 ATGCAAATTTTCGTCAAAACCTTAACAGGTAAGACCATTACCTTGGAAGTCGAATCTTCC 1530929 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | | || | ||| || ||| ||||| || || | || ||| ||| Sbjct 1530930 GACACCATTGACAATGTTAAGTCTAAGATCCAAGACAAGGAAGGTATTCCTCCAGACCAA 1530989 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 || ||| | |||||||| || || |||||||||||| || |||| || |||| || ||| Sbjct 1530990 CAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTACAAC 1531049 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGG 28780 || ||||| ||||| ||| ||||| |||| || ||||| |||| || Sbjct 1531050 ATCCAAAAGGAATCCACTTTGCACTTGGTCTTGAGATTGAGAGGTGG 1531096 >seq1 Length=1050866 Score = 98.7 bits (108), Expect = 8e-16 Identities = 156/224 (70%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 28563 TTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCAGAGACGGTG 28622 || || || || || || ||||| ||||| || ||| ||| |||| || || | Sbjct 59643 TTCGTCAAGACCTTGACTGGTAAGACCATCACTTTGGAAGTCGAATCTTCCGACACCATT 59702 Query 28623 GCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAACAGAGACTT 28682 | | || ||||| || || ||||| || || | || ||| ||||| ||| | Sbjct 59703 GACAATGTCAAGTCTAAGATTCAAGACAAGGAAGGTATCCCACCAGACCAACAAAGATTG 59762 Query 28683 ATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAACATTCAAAAA 28742 |||||||| || || |||||||||||| || ||| || | || || ||||| ||||| Sbjct 59763 ATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACCTTGTCTGACTACAACATCCAAAAG 59822 Query 28743 GAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGATAAT 28786 ||||| ||| ||||| |||| || ||||| |||| || || || Sbjct 59823 GAATCCACTTTGCACTTGGTTTTGAGATTGAGAGGTGGTATCAT 59866 >seq5 Length=2217437 Score = 96.9 bits (106), Expect = 3e-15 Identities = 162/233 (70%), Gaps = 6/233 (3%) Strand=Plus/Minus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||| || || ||||| || || ||||| ||||| || ||| ||| |||| Sbjct 75870 ATGCAAATTTTCGTCAAAACCTTGACTGGTAAGACCATCACTTTGGAAGTCGAATCTTCC 75811 Query 28614 GAGACGGTGGCCGATCTCAAGCAA---AAAATCGCCGACAAAGAGGGAGTGCCCGTAGAT 28670 || || | |||| | | || || || |||||||| || | || ||| Sbjct 75810 GACACCAT---CGATAACGTGAAATCGAAGATTCAAGACAAAGAAGGTATCCCTCCAGAC 75754 Query 28671 CAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTAT 28730 ||||| ||| | || ||||| || || || ||||||||| | ||| || ||||||| Sbjct 75753 CAACAAAGATTAATTTTTGCAGGTAAGCAGTTGGAAGATGGAAGAACCTTGTCCGATTAC 75694 Query 28731 AACATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 ||||| ||||||||||| ||| |||| | || || |||||| |||| || || Sbjct 75693 AACATCCAAAAAGAATCCACTTTGCATCTTGTTTTGAGATTAAGAGGTGGTAT 75641 Score = 93.3 bits (102), Expect = 4e-14 Identities = 161/233 (69%), Gaps = 6/233 (3%) Strand=Plus/Minus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||| || || ||||| || || ||||| ||||| || ||| ||| |||| Sbjct 75414 ATGCAAATTTTCGTCAAAACCTTGACTGGTAAGACCATCACTTTGGAAGTCGAATCTTCC 75355 Query 28614 GAGACGGTGGCCGATCTCAAGCAA---AAAATCGCCGACAAAGAGGGAGTGCCCGTAGAT 28670 || || | |||| | | || || || |||||||| || | || ||| Sbjct 75354 GACACCAT---CGATAACGTGAAATCGAAGATTCAAGACAAAGAAGGTATCCCTCCAGAC 75298 Query 28671 CAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTAT 28730 ||||| ||| | || ||||| || || || ||||||||| | ||| || | || ||| Sbjct 75297 CAACAAAGATTAATTTTTGCAGGTAAGCAGTTGGAAGATGGCAGAACCTTGTCTGACTAT 75238 Query 28731 AACATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 ||||| ||||||||||| ||| |||| | || || |||||| |||| || || Sbjct 75237 AACATCCAAAAAGAATCCACTTTGCATCTTGTTTTGAGATTAAGAGGTGGTAT 75185 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425404763707653