Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20lactis_20[genbank_20GCA_5F002151565.1_202017-05-19] 7 sequences; 10,682,662 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq3 176 2e-39 seq6 150 9e-32 >seq3 Length=1752996 Score = 176 bits (194), Expect = 2e-39 Identities = 306/445 (69%), Gaps = 0/445 (0%) Strand=Plus/Plus Query 25922 TCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTC 25981 || ||| ||| ||| || ||||| |||||||||| |||| ||||||||||| || | Sbjct 676664 TCCACTCTCTTCATGAACAAATCAGGAATCCACAATGCAGGGAATAAATCTCTAGCACGA 676723 Query 25982 ATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCAT 26041 |||||||| ||||| |||||||| | | ||| | |||||| || ||||| || |||||| Sbjct 676724 ATTTCTTCCTTTCCATGATTCTTCCTGATATCAATGAAATCGAAGATATCAGAATGCCAT 676783 Query 26042 GGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTT 26101 ||||| | || | ||| || |||| ||| || |||||||| || ||||| | Sbjct 676784 GGTTCAATGTATAAAGCGAAGGCACCTGGTCTCTTGTTACCACCTTGGTCAACGTAACGA 676843 Query 26102 GCAGTTTCATTGAAAACTTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTA 26161 ||||| | ||||| || | |||||||| | ||| | ||| |||||| || | | Sbjct 676844 GCAGTGTTGTTGAAGACACGGATCATTGGAATGATACCATTAGAAGTTCCGTTGGTACCA 676903 Query 26162 TGAATCTTGGATCCTGTCGATCTAATATCGTGAGCATGAATACCGATTCCACCAGCCCAT 26221 ||| | || || || || | || | |||| || | || || |||||||| Sbjct 676904 GCAATGTAAGAACCAGTAGAACGGATGTTGTGAATGTGCAACCCAATACCACCAGCAGTC 676963 Query 26222 TTTGAAATAGCTGCACAATCTGAAACTGTATCGAAAATTCCTTTTATGCTATCACCTTTC 26281 ||||| || ||||| || | |||||| |||| |||| ||| ||| ||||| Sbjct 676964 TTTGAGATCATAGCACATTCCTTCAAGGTATCGTAAATACCTTCGATGGAATCCTCTTTC 677023 Query 26282 ATTCCTAATAAAAAACAAGAAGATAATTGCGAATGAGTTGTTCCTGAATTAAATAATGTC 26341 || | | || |||||||| || | ||| | ||||| || || | || || ||||| Sbjct 677024 ATAGCAACCAAGAAACAAGATGACATTTGAGGATGAGGAGTACCAGCGTTGAACAATGTA 677083 Query 26342 GGTGTAGCATGAGTATAATATCCTT 26366 || | ||| || || |||||| || Sbjct 677084 GGAGAAGCGTGGGTGAAATATCTTT 677108 >seq6 Length=2601250 Score = 150 bits (166), Expect = 9e-32 Identities = 186/251 (74%), Gaps = 4/251 (2%) Strand=Plus/Minus Query 25906 CCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAA 25965 ||| || |||| | |||||| || |||||| | ||| || ||||| | |||||||| Sbjct 110376 CCAGTCTTCATTATTCTCAACCCGCTTCATAAAGAGATCAGGTATCCAGAGGGCATAAAA 110317 Query 25966 TAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAA 26025 |||||||| || |||||||| ||||| || ||||||||| | || | ||||| |||| Sbjct 110316 CAAATCTCTTGCCCTCATTTCCTCTTTGCCATGATTCTTTCTCAGTTGCAAGAAGTCAAT 110257 Query 26026 AATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAA--CTACCTTTTCTTTTTCCTCCA 26083 || |||| ||||| || || ||||| ||| || || || ||| |||||| |||| Sbjct 110256 TATGTCTGCATGCCAGGGCTCCAAATATATA-CAGAATGCT-CCTGGTCTTTTATTTCCA 110199 Query 26084 CCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGAACTAATCCAGTT 26143 |||||||| || || || ||||| | ||||||||| | |||||||| || | ||| | Sbjct 110198 CCTTGATCAACATACCTGGCAGTGTTATTGAAAACCCTTAACATTGGCACAAGGCCATTG 110139 Query 26144 GAAAATCCGTT 26154 || |||||| Sbjct 110138 GATGTTCCGTT 110128 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253039978412525