Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20lactis_20[genbank_20GCA_5F002151565.1_202017-05-19]
7 sequences; 10,682,662 total letters
Query= NC_020842.1
Length=79114
Score E
Sequences producing significant alignments: (Bits) Value
seq3 176 2e-39
seq6 150 9e-32
>seq3
Length=1752996
Score = 176 bits (194), Expect = 2e-39
Identities = 306/445 (69%), Gaps = 0/445 (0%)
Strand=Plus/Plus
Query 25922 TCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTC 25981
|| ||| ||| ||| || ||||| |||||||||| |||| ||||||||||| || |
Sbjct 676664 TCCACTCTCTTCATGAACAAATCAGGAATCCACAATGCAGGGAATAAATCTCTAGCACGA 676723
Query 25982 ATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCAT 26041
|||||||| ||||| |||||||| | | ||| | |||||| || ||||| || ||||||
Sbjct 676724 ATTTCTTCCTTTCCATGATTCTTCCTGATATCAATGAAATCGAAGATATCAGAATGCCAT 676783
Query 26042 GGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTT 26101
||||| | || | ||| || |||| ||| || |||||||| || ||||| |
Sbjct 676784 GGTTCAATGTATAAAGCGAAGGCACCTGGTCTCTTGTTACCACCTTGGTCAACGTAACGA 676843
Query 26102 GCAGTTTCATTGAAAACTTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTA 26161
||||| | ||||| || | |||||||| | ||| | ||| |||||| || | |
Sbjct 676844 GCAGTGTTGTTGAAGACACGGATCATTGGAATGATACCATTAGAAGTTCCGTTGGTACCA 676903
Query 26162 TGAATCTTGGATCCTGTCGATCTAATATCGTGAGCATGAATACCGATTCCACCAGCCCAT 26221
||| | || || || || | || | |||| || | || || ||||||||
Sbjct 676904 GCAATGTAAGAACCAGTAGAACGGATGTTGTGAATGTGCAACCCAATACCACCAGCAGTC 676963
Query 26222 TTTGAAATAGCTGCACAATCTGAAACTGTATCGAAAATTCCTTTTATGCTATCACCTTTC 26281
||||| || ||||| || | |||||| |||| |||| ||| ||| |||||
Sbjct 676964 TTTGAGATCATAGCACATTCCTTCAAGGTATCGTAAATACCTTCGATGGAATCCTCTTTC 677023
Query 26282 ATTCCTAATAAAAAACAAGAAGATAATTGCGAATGAGTTGTTCCTGAATTAAATAATGTC 26341
|| | | || |||||||| || | ||| | ||||| || || | || || |||||
Sbjct 677024 ATAGCAACCAAGAAACAAGATGACATTTGAGGATGAGGAGTACCAGCGTTGAACAATGTA 677083
Query 26342 GGTGTAGCATGAGTATAATATCCTT 26366
|| | ||| || || |||||| ||
Sbjct 677084 GGAGAAGCGTGGGTGAAATATCTTT 677108
>seq6
Length=2601250
Score = 150 bits (166), Expect = 9e-32
Identities = 186/251 (74%), Gaps = 4/251 (2%)
Strand=Plus/Minus
Query 25906 CCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAA 25965
||| || |||| | |||||| || |||||| | ||| || ||||| | ||||||||
Sbjct 110376 CCAGTCTTCATTATTCTCAACCCGCTTCATAAAGAGATCAGGTATCCAGAGGGCATAAAA 110317
Query 25966 TAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAA 26025
|||||||| || |||||||| ||||| || ||||||||| | || | ||||| ||||
Sbjct 110316 CAAATCTCTTGCCCTCATTTCCTCTTTGCCATGATTCTTTCTCAGTTGCAAGAAGTCAAT 110257
Query 26026 AATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAA--CTACCTTTTCTTTTTCCTCCA 26083
|| |||| ||||| || || ||||| ||| || || || ||| |||||| ||||
Sbjct 110256 TATGTCTGCATGCCAGGGCTCCAAATATATA-CAGAATGCT-CCTGGTCTTTTATTTCCA 110199
Query 26084 CCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGAACTAATCCAGTT 26143
|||||||| || || || ||||| | ||||||||| | |||||||| || | ||| |
Sbjct 110198 CCTTGATCAACATACCTGGCAGTGTTATTGAAAACCCTTAACATTGGCACAAGGCCATTG 110139
Query 26144 GAAAATCCGTT 26154
|| ||||||
Sbjct 110138 GATGTTCCGTT 110128
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 253039978412525
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |