Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20lactis_20[genbank_20GCA_5F002151565.1_202017-05-19] 7 sequences; 10,682,662 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq5 149 1e-30 seq4 141 2e-28 seq1 114 2e-20 >seq5 Length=2217437 Score = 149 bits (164), Expect = 1e-30 Identities = 175/237 (74%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| ||||||||||| |||| | || |||||||| || | ||||| || || Sbjct 75178 AATTTGCATACCACCTCTTAATCTCAAAACAAGATGCAAAGTGGATTCTTTTTGGATGTT 75237 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 |||||| || || ||||| ||| || || || || || |||||||||||||| ||||| Sbjct 75238 ATAGTCAGACAAGGTTCTGCCATCTTCCAACTGCTTACCTGCAAAAATTAATCTTTGTTG 75297 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 || ||||| || |||||||| ||||| || || | ||| | || || || ||||| Sbjct 75298 GTCTGGAGGGATACCTTCTTTGTCTTGAATCTTCGATTTCACGTTATCGATGGTGTCGGA 75357 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 ||| || ||||| | ||| || || ||||| || | ||||| || || |||||||| Sbjct 75358 AGATTCGACTTCCAAAGTGATGGTCTTACCAGTCAAGGTTTTGACGAAAATTTGCAT 75414 Score = 145 bits (160), Expect = 1e-29 Identities = 176/240 (73%), Gaps = 0/240 (0%) Strand=Plus/Plus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| ||||||||||| |||| | || ||||| || || | || || || || Sbjct 75862 AATTTGCATACCACCTCTTAATCTCAAGACAAGATGTAAAGTGGATTCCTTTTGGATGTT 75921 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 |||||| || || ||||| ||| || || || || || |||||||||||||| ||||| Sbjct 75922 ATAGTCAGACAAGGTTCTGCCATCTTCCAACTGCTTACCTGCAAAAATTAATCTTTGTTG 75981 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 || ||||| || |||||||| ||||| || || | ||| | || || || || || Sbjct 75982 GTCTGGAGGGATACCTTCTTTGTCTTGAATCTTCGATTTCACGTTATCGATGGTGTCAGA 76041 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363 ||| |||||||| | ||| ||||| ||||| |||| || || || || |||||||| || Sbjct 76042 AGATTCAACTTCCAAAGTGATAGTCTTACCAGTTAAAGTCTTAACGAAAATTTGCATGTT 76101 Score = 143 bits (158), Expect = 5e-29 Identities = 174/237 (73%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| ||||||||||| |||| | || |||||||| || | ||||| || || Sbjct 75634 AATTTGCATACCACCTCTTAATCTCAAAACAAGATGCAAAGTGGATTCTTTTTGGATGTT 75693 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 || ||||| || ||||| ||| || || || || || |||||||||||||| ||||| Sbjct 75694 GTAATCGGACAAGGTTCTTCCATCTTCCAACTGCTTACCTGCAAAAATTAATCTTTGTTG 75753 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 || ||||| || |||||||| ||||| || || | ||| | || || || ||||| Sbjct 75754 GTCTGGAGGGATACCTTCTTTGTCTTGAATCTTCGATTTCACGTTATCGATGGTGTCGGA 75813 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 ||| || ||||| | ||| || || ||||| || | ||||| || || |||||||| Sbjct 75814 AGATTCGACTTCCAAAGTGATGGTCTTACCAGTCAAGGTTTTGACGAAAATTTGCAT 75870 Score = 140 bits (154), Expect = 6e-28 Identities = 173/237 (73%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| ||||||||||| |||| | || ||||| || || | || || || || Sbjct 75406 AATTTGCATACCACCTCTTAATCTCAAGACAAGATGTAAAGTGGATTCCTTTTGGATGTT 75465 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 |||||| || || ||||| ||| || || || || || |||||||||||||| ||||| Sbjct 75466 ATAGTCAGACAAGGTTCTGCTATCTTCCAACTGCTTACCTGCAAAAATTAATCTTTGTTG 75525 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 || ||||| || |||||||| ||||| || || | || | || || || ||||| Sbjct 75526 GTCTGGAGGAATACCTTCTTTGTCTTGAATCTTAGACTTGACGTTATCGATGGTGTCGGA 75585 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 ||| || ||||| | ||| || || ||||| |||| ||||| || || |||||||| Sbjct 75586 AGATTCGACTTCCAAAGTGATGGTCTTACCGGTTAAGGTTTTGACGAAAATTTGCAT 75642 Score = 134 bits (148), Expect = 2e-26 Identities = 170/234 (73%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 193127 TTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATA 193186 ||| || |||||||| |||| | || ||||| || || | || || || ||||| Sbjct 74953 TTAGATGCCACCTCTTAATCTCAAGACAAGATGTAAAGTGGATTCCTTTTGGATGTTATA 75012 Query 193187 GTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATC 193246 ||| || || ||||| ||| || || || || || |||||||||||||| ||||| || Sbjct 75013 GTCAGACAAGGTTCTGCCATCTTCCAACTGCTTACCTGCAAAAATTAATCTTTGTTGGTC 75072 Query 193247 AGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGA 193306 ||||| || |||||||| ||||| || || | || | || || || || ||||| Sbjct 75073 TGGAGGAATACCTTCTTTGTCTTGAATCTTAGACTTGACGTTATCGATGGTGTCAGAAGA 75132 Query 193307 CTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 |||||||| | ||| || || ||||| |||| ||||| || || |||||||| Sbjct 75133 TTCAACTTCCAAAGTGATGGTCTTACCGGTTAAGGTTTTGACGAAAATTTGCAT 75186 >seq4 Length=1700866 Score = 141 bits (156), Expect = 2e-28 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 193133 ACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGA 193192 |||||||||||||| | |||| ||||| || | || || || || |||||||| Sbjct 1531097 ACCACCTCTCAATCTCAAGACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCGGA 1531038 Query 193193 TAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGG 193252 || |||||| ||| || ||||| || || ||||| || ||||| ||||| || ||||| Sbjct 1531037 CAAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGAGG 1530978 Query 193253 TATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAAC 193312 || ||||| || ||||| || || | || | ||| ||| || |||||||| || || Sbjct 1530977 AATACCTTCCTTGTCTTGGATCTTAGACTTAACATTGTCAATGGTGTCGGAAGATTCGAC 1530918 Query 193313 TTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 ||| | || || || |||||||||| ||||| || || |||||||| Sbjct 1530917 TTCCAAGGTAATGGTCTTACCTGTTAAGGTTTTGACGAAAATTTGCAT 1530870 >seq1 Length=1050866 Score = 114 bits (126), Expect = 2e-20 Identities = 149/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 |||||||||||||||| | |||| ||||| || | || || || || ||||| Sbjct 59863 ATACCACCTCTCAATCTCAAAACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCA 59804 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 || || |||||| ||| || ||||| || || ||||| || ||||| ||||| || || Sbjct 59803 GACAAGGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGT 59744 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || ||||| || ||||| || || | || | ||| ||| || |||||||| || Sbjct 59743 GGGATACCTTCCTTGTCTTGAATCTTAGACTTGACATTGTCAATGGTGTCGGAAGATTCG 59684 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGT 193336 ||||| | ||| || || ||||| || Sbjct 59683 ACTTCCAAAGTGATGGTCTTACCAGT 59658 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899654321280240