Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20lactis_20[genbank_20GCA_5F002151565.1_202017-05-19]
7 sequences; 10,682,662 total letters
Query= NC_021247.1
Length=228750
Score E
Sequences producing significant alignments: (Bits) Value
seq5 154 2e-32
seq4 127 3e-24
seq1 107 3e-18
>seq5
Length=2217437
Score = 154 bits (170), Expect = 2e-32
Identities = 171/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||| || | ||||| |||||||| || || || || || ||||||||| |||
Sbjct 75414 ATGCAAATTTTCGTCAAAACCTTGACTGGTAAGACCATCACTTTGGAAGTCGAATCTTCC 75355
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | || ||||||||| || || ||||| |||||||| || |||||||| |||
Sbjct 75354 GACACCATCGATAACGTGAAATCGAAGATTCAAGACAAAGAAGGTATCCCTCCAGACCAA 75295
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
|||||||| |||| ||| ||||||||| | |||||| |||||| || || || |||||
Sbjct 75294 CAAAGATTAATTTTTGCAGGTAAGCAGTTGGAAGATGGCAGAACCTTGTCTGACTATAAC 75235
Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050
|| ||||| | || | ||| | || || ||||||||||| |||
Sbjct 75234 ATCCAAAAAGAATCCACTTTGCATCTTGTTTTGAGATTAAGAGGTGGT 75187
Score = 154 bits (170), Expect = 2e-32
Identities = 175/233 (75%), Gaps = 4/233 (2%)
Strand=Plus/Minus
Query 155820 AAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGAT 155879
|| |||||||| || |||| || || ||||| || ||||| || || ||||| ||| |
Sbjct 76101 AACATGCAAATTTTCGTTAAGACTTTAACTGGTAAGACTATCACTTTGGAAGTTGAATCT 76042
Query 155880 TCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAA 155939
||||| | || ||||||||| || || ||||| |||||||| || ||||||||
Sbjct 76041 TCTGACACCATCGATAACGTGAAATCGAAGATTCAAGACAAAGAAGGTATCCCTCCAGAC 75982
Query 155940 CAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTAT 155999
||||||||||| |||| ||| ||||||||| | |||||| |||||| || || || |||
Sbjct 75981 CAACAAAGATTAATTTTTGCAGGTAAGCAGTTGGAAGATGGCAGAACCTTGTCTGACTAT 75922
Query 156000 AATATATCCAAA--GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050
|| || ||||| || | || | ||| | || || ||||||||||| |||
Sbjct 75921 AACAT--CCAAAAGGAATCCACTTTACATCTTGTCTTGAGATTAAGAGGTGGT 75871
Score = 150 bits (166), Expect = 3e-31
Identities = 170/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||| || | ||||| |||||||| || || || || || ||||||||| |||
Sbjct 75870 ATGCAAATTTTCGTCAAAACCTTGACTGGTAAGACCATCACTTTGGAAGTCGAATCTTCC 75811
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | || ||||||||| || || ||||| |||||||| || |||||||| |||
Sbjct 75810 GACACCATCGATAACGTGAAATCGAAGATTCAAGACAAAGAAGGTATCCCTCCAGACCAA 75751
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
|||||||| |||| ||| ||||||||| | |||||| ||||| || || ||||| ||
Sbjct 75750 CAAAGATTAATTTTTGCAGGTAAGCAGTTGGAAGATGGAAGAACCTTGTCCGATTACAAC 75691
Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050
|| ||||| | || | ||| | || || ||||||||||| |||
Sbjct 75690 ATCCAAAAAGAATCCACTTTGCATCTTGTTTTGAGATTAAGAGGTGGT 75643
Score = 143 bits (158), Expect = 4e-29
Identities = 171/230 (74%), Gaps = 4/230 (2%)
Strand=Plus/Minus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||| || | ||||| || || || || || || || || ||||||||| |||
Sbjct 75642 ATGCAAATTTTCGTCAAAACCTTAACCGGTAAGACCATCACTTTGGAAGTCGAATCTTCC 75583
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | || ||||| || ||| || ||||| |||||||| || |||||||| |||
Sbjct 75582 GACACCATCGATAACGTCAAGTCTAAGATTCAAGACAAAGAAGGTATTCCTCCAGACCAA 75523
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
|||||||| |||| ||| ||||||||| | ||||||| |||||| || || || |||||
Sbjct 75522 CAAAGATTAATTTTTGCAGGTAAGCAGTTGGAAGATAGCAGAACCTTGTCTGACTATAAC 75463
Query 156003 ATATCCAAA--GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050
|| ||||| || | || | ||| | || || ||||||||||| |||
Sbjct 75462 AT--CCAAAAGGAATCCACTTTACATCTTGTCTTGAGATTAAGAGGTGGT 75415
Score = 138 bits (152), Expect = 2e-27
Identities = 169/229 (74%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||| || | ||||| || || || || || || || || ||||| ||| ||||
Sbjct 75186 ATGCAAATTTTCGTCAAAACCTTAACCGGTAAGACCATCACTTTGGAAGTTGAATCTTCT 75127
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | || ||||| || ||| || ||||| |||||||| || |||||||| |||
Sbjct 75126 GACACCATCGATAACGTCAAGTCTAAGATTCAAGACAAAGAAGGTATTCCTCCAGACCAA 75067
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
|||||||| |||| ||| ||||||||| | |||||| |||||| || || || |||||
Sbjct 75066 CAAAGATTAATTTTTGCAGGTAAGCAGTTGGAAGATGGCAGAACCTTGTCTGACTATAAC 75007
Query 156003 ATATCCAAA--GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGG 156049
|| ||||| || | || | ||| | || || ||||||||||| ||
Sbjct 75006 AT--CCAAAAGGAATCCACTTTACATCTTGTCTTGAGATTAAGAGGTGG 74960
>seq4
Length=1700866
Score = 127 bits (140), Expect = 3e-24
Identities = 168/231 (73%), Gaps = 4/231 (2%)
Strand=Plus/Plus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||| || | ||||| || || || || || ||||| || ||||||||| |||
Sbjct 1530870 ATGCAAATTTTCGTCAAAACCTTAACAGGTAAGACCATTACCTTGGAAGTCGAATCTTCC 1530929
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | ||| || || || ||| || ||||| || ||||| || |||||||| |||
Sbjct 1530930 GACACCATTGACAATGTTAAGTCTAAGATCCAAGACAAGGAAGGTATTCCTCCAGACCAA 1530989
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
||||||||||| | ||| |||||||| | |||||| |||||||| || || || |
Sbjct 1530990 CAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTACA-- 1531047
Query 156003 ATATCCAAA--GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGTG 156051
| ||||||| || | || | || || || || ||||| ||||| ||||
Sbjct 1531048 ACATCCAAAAGGAATCCACTTTGCACTTGGTCTTGAGATTGAGAGGTGGTG 1531098
>seq1
Length=1050866
Score = 107 bits (118), Expect = 3e-18
Identities = 154/215 (72%), Gaps = 4/215 (2%)
Strand=Plus/Plus
Query 155838 AAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCTGATAATATTTTAAAC 155897
|| || |||||||| || || || || || ||||||||| ||| || | ||| ||
Sbjct 59649 AAGACCTTGACTGGTAAGACCATCACTTTGGAAGTCGAATCTTCCGACACCATTGACAAT 59708
Query 155898 GTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAACAAAGATTGATTTAT 155957
|| || ||| || ||||| || ||||| || || ||||| |||||||||||||| | |
Sbjct 59709 GTCAAGTCTAAGATTCAAGACAAGGAAGGTATCCCACCAGACCAACAAAGATTGATCTTT 59768
Query 155958 GCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAATATATCCAAA--GAGG 156015
|| |||||||| | |||||| ||||| || || || || | | ||||||| ||
Sbjct 59769 GCTGGTAAGCAATTGGAAGATGGTAGAACCTTGTCTGACTACA--ACATCCAAAAGGAAT 59826
Query 156016 CGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050
| || | || || || || ||||| ||||| |||
Sbjct 59827 CCACTTTGCACTTGGTTTTGAGATTGAGAGGTGGT 59861
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 731871935961200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |