Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20lactis_20[genbank_20GCA_5F002151565.1_202017-05-19]
7 sequences; 10,682,662 total letters
Query= NC_021249.1
Length=282895
Score E
Sequences producing significant alignments: (Bits) Value
seq6 192 1e-43
seq5 149 1e-30
seq4 132 9e-26
seq1 125 1e-23
>seq6
Length=2601250
Score = 192 bits (212), Expect = 1e-43
Identities = 373/543 (69%), Gaps = 11/543 (2%)
Strand=Plus/Minus
Query 38832 TTTTGGTATTCAGAAACttttttttCGAAAAAGTTTGTTTTTCCTTCTAATGATATTAAA 38891
|||||||| || || ||| | |||||||||||||| || || || | || || ||
Sbjct 1394650 TTTTGGTAATCGGAGACTCTCTTTTCGAAAAAGTTGGTCTTACCAGCCAAGGAGATATTT 1394591
Query 38892 TTCATAAAATCAAATGGATTTTTGGTATTATAATATTTTTCTCCTATC-AATACATATAA 38950
| ||| ||||| ||||| || || ||| ||||||| | | || | || | ||
Sbjct 1394590 TCCATGAAATCGAATGGGTTGGTGACATTGAAATATTTCT-TGTTACCCAAGGCGACCAA 1394532
Query 38951 TAATCTATCGGCCACAAATTCAACATATTGTAACATTAATTCACAATTCATACCCAATAA 39010
|||||| ||||| |||||||| || ||||| |||||| || |||||||||||||
Sbjct 1394531 TAATCTGTCGGCGACAAATTCCACGTATTGGTTCATTAAGTCTGCGTTCATACCCAATAG 1394472
Query 39011 TTTAAATGGTAATGCAT-CATCAATAAATTCtttttctatttctacagcttgtttaatta 39069
|| |||| |||| ||| || | || ||||| ||||| ||||||| | |||| |
Sbjct 1394471 AGAAACGGGTAGAGCATCCATGAAGTATCTC-TTTTCAATTTCGACAGCTTCTGTAATGA 1394413
Query 39070 tcataattatattattttttga--taatttatatttaatatgattcgcatataGTAAACA 39127
|| | || | |||| | || | ||||| || | ||| ||| | |||| |||
Sbjct 1394412 TCTT--TTCCACAATTTCTGGATTTGGTTTATTCTTCAAATG---GGCAAAGAGTAGACA 1394358
Query 39128 TGCAAAATCCGTATGTAAACCTTCGTCCCTAGATATAAATTCATTACTAAAAGTTAATCC 39187
||||| || ||||||| |||||| || ||| | || || || ||| ||||| || ||
Sbjct 1394357 GGCAAAGTCTGTATGTAGACCTTCATCTCTACAGATCAACTCGTTAGAGAAAGTCAAACC 1394298
Query 39188 TGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAATAT 39247
|||||||| || |||| || | ||| || || | ||||| || || ||||| |
Sbjct 1394297 AGGCATTAACCCCTTCTTCTTCAACCAGAAGATAGCAGCAAAGGAACCGGAGAAGAACAC 1394238
Query 39248 ACCCTCCACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATCATCTAAAAT 39307
||| |||||| || || || | | |||| | ||||||| | ||||||| |||
Sbjct 1394237 ACCTTCCACAGCAGCGAAAGCAACCAATCTTTCACCAAACAAGGCATCATCATCTTGAAT 1394178
Query 39308 CCAATTTATGGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTATAGCTTTAAA 39367
||| | || ||||| || || |||| ||| || || ||| |||| ||||| || ||
Sbjct 1394177 CCATCTGATAGCCCATTCAGCCTTTTCTTTAATTTGTGGGATAGTTTCGATAGCATTGAA 1394118
Query 39368 TAA 39370
||
Sbjct 1394117 CAA 1394115
>seq5
Length=2217437
Score = 149 bits (164), Expect = 1e-30
Identities = 171/230 (74%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
||||||||||| | || || || | ||| ||||| | ||||| || || |||||
Sbjct 75641 ATACCACCTCTTAATCTCAAAACAAGATGCAAAGTGGATTCTTTTTGGATGTTGTAATCG 75700
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
|| || | || | | || ||||| || ||||| |||||||||||||| |||||||| ||
Sbjct 75701 GACAAGGTTCTTCCATCTTCCAACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGA 75760
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || |||||||| ||||| || || ||| || ||| || || || || |||||
Sbjct 75761 GGGATACCTTCTTTGTCTTGAATCTTCGATTTCACGTTATCGATGGTGTCGGAAGATTCG 75820
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
||||| | ||| ||||| |||||||| || ||||| | ||| || |||||
Sbjct 75821 ACTTCCAAAGTGATGGTCTTACCAGTCAAGGTTTTGACGAAAATTTGCAT 75870
Score = 145 bits (160), Expect = 1e-29
Identities = 170/230 (74%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
||||||||||| | || || || | ||| ||||| | ||||| || ||||| ||
Sbjct 75185 ATACCACCTCTTAATCTCAAAACAAGATGCAAAGTGGATTCTTTTTGGATGTTATAGTCA 75244
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
|| || | || | || ||||| || ||||| |||||||||||||| |||||||| ||
Sbjct 75245 GACAAGGTTCTGCCATCTTCCAACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGA 75304
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || |||||||| ||||| || || ||| || ||| || || || || |||||
Sbjct 75305 GGGATACCTTCTTTGTCTTGAATCTTCGATTTCACGTTATCGATGGTGTCGGAAGATTCG 75364
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
||||| | ||| ||||| |||||||| || ||||| | ||| || |||||
Sbjct 75365 ACTTCCAAAGTGATGGTCTTACCAGTCAAGGTTTTGACGAAAATTTGCAT 75414
Score = 145 bits (160), Expect = 1e-29
Identities = 172/233 (74%), Gaps = 0/233 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
||||||||||| | || || || | ||||||||| | || || || ||||| ||
Sbjct 75869 ATACCACCTCTTAATCTCAAGACAAGATGTAAAGTGGATTCCTTTTGGATGTTATAGTCA 75928
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
|| || | || | || ||||| || ||||| |||||||||||||| |||||||| ||
Sbjct 75929 GACAAGGTTCTGCCATCTTCCAACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGA 75988
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || |||||||| ||||| || || ||| || ||| || || || || |||||
Sbjct 75989 GGGATACCTTCTTTGTCTTGAATCTTCGATTTCACGTTATCGATGGTGTCAGAAGATTCA 76048
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072
||||| | ||| || || ||||||||||| || |||| ||| || ||||| ||
Sbjct 76049 ACTTCCAAAGTGATAGTCTTACCAGTTAAAGTCTTAACGAAAATTTGCATGTT 76101
Score = 140 bits (154), Expect = 6e-28
Identities = 169/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|| |||||||| | || || || | ||||||||| | || || || ||||| ||
Sbjct 74957 ATGCCACCTCTTAATCTCAAGACAAGATGTAAAGTGGATTCCTTTTGGATGTTATAGTCA 75016
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
|| || | || | || ||||| || ||||| |||||||||||||| |||||||| ||
Sbjct 75017 GACAAGGTTCTGCCATCTTCCAACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGA 75076
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || |||||||| ||||| || ||| || || ||| || || || || |||||
Sbjct 75077 GGAATACCTTCTTTGTCTTGAATCTTAGACTTGACGTTATCGATGGTGTCAGAAGATTCA 75136
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
||||| | ||| ||||| ||||| ||||| ||||| | ||| || |||||
Sbjct 75137 ACTTCCAAAGTGATGGTCTTACCGGTTAAGGTTTTGACGAAAATTTGCAT 75186
Score = 140 bits (154), Expect = 6e-28
Identities = 169/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
||||||||||| | || || || | ||||||||| | || || || ||||| ||
Sbjct 75413 ATACCACCTCTTAATCTCAAGACAAGATGTAAAGTGGATTCCTTTTGGATGTTATAGTCA 75472
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
|| || | || || ||||| || ||||| |||||||||||||| |||||||| ||
Sbjct 75473 GACAAGGTTCTGCTATCTTCCAACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGA 75532
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || |||||||| ||||| || ||| || || ||| || || || || |||||
Sbjct 75533 GGAATACCTTCTTTGTCTTGAATCTTAGACTTGACGTTATCGATGGTGTCGGAAGATTCG 75592
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
||||| | ||| ||||| ||||| ||||| ||||| | ||| || |||||
Sbjct 75593 ACTTCCAAAGTGATGGTCTTACCGGTTAAGGTTTTGACGAAAATTTGCAT 75642
>seq4
Length=1700866
Score = 132 bits (146), Expect = 9e-26
Identities = 171/236 (72%), Gaps = 0/236 (0%)
Strand=Plus/Minus
Query 171834 TTCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTA 171893
||| || ||||||||| | || || || || || ||||| | || || || ||
Sbjct 1531105 TTCTTACCACCACCTCTCAATCTCAAGACCAAGTGCAAAGTGGATTCCTTTTGGATGTTG 1531046
Query 171894 TAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGG 171953
|| || || |||| || | || |||||||| ||||||||||| || ||||| ||||||
Sbjct 1531045 TAGTCGGACAAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGG 1530986
Query 171954 TCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGAC 172013
|| || || || ||||| || ||||| || ||| || ||||| || || || ||
Sbjct 1530985 TCTGGAGGAATACCTTCCTTGTCTTGGATCTTAGACTTAACATTGTCAATGGTGTCGGAA 1530926
Query 172014 GATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
||||| ||||| | |||||||| ||||| ||||| ||||| | ||| || |||||
Sbjct 1530925 GATTCGACTTCCAAGGTAATGGTCTTACCTGTTAAGGTTTTGACGAAAATTTGCAT 1530870
>seq1
Length=1050866
Score = 125 bits (138), Expect = 1e-23
Identities = 162/224 (72%), Gaps = 0/224 (0%)
Strand=Plus/Minus
Query 171837 ATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAA 171896
|| ||||||||||| | || || || || || ||||| | || || || || ||
Sbjct 59866 ATGATACCACCTCTCAATCTCAAAACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAG 59807
Query 171897 TCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCA 171956
|| || || | || | || |||||||| ||||||||||| || ||||| ||||||||
Sbjct 59806 TCAGACAAGGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCT 59747
Query 171957 GGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGAT 172016
||||| || ||||| || ||||| || ||| || ||||| || || || || |||
Sbjct 59746 GGTGGGATACCTTCCTTGTCTTGAATCTTAGACTTGACATTGTCAATGGTGTCGGAAGAT 59687
Query 172017 TCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAA 172060
|| ||||| | ||| ||||| |||||||| || || || | |||
Sbjct 59686 TCGACTTCCAAAGTGATGGTCTTACCAGTCAAGGTCTTGACGAA 59643
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 905135920800600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |