Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20lactis_20[genbank_20GCA_5F002151565.1_202017-05-19] 7 sequences; 10,682,662 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq4 140 3e-28 seq5 132 4e-26 seq1 118 1e-21 seq3 111 1e-19 seq6 105 6e-18 >seq4 Length=1700866 Score = 140 bits (154), Expect = 3e-28 Identities = 169/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || || | ||||| |||| ||||| || ||||| | ||||| ||| | || Sbjct 1530870 ATGCAAATTTTCGTCAAAACCTTAACAGGTAAGACCATTACCTTGGAAGTCGAATCTTCC 1530929 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||||||||| ||||| || ||||| || ||| Sbjct 1530930 GACACCATTGACAATGTTAAGTCTAAGATCCAAGACAAGGAAGGTATTCCTCCAGACCAA 1530989 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||| | ||||||||||| || || || |||| ||| |||| |||| || || ||| Sbjct 1530990 CAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTACAAC 1531049 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGG 24933 || ||||||||||| || | |||||||| ||| ||||| | || || || Sbjct 1531050 ATCCAAAAGGAATCCACTTTGCACTTGGTCTTGAGATTGAGAGGTGGTGG 1531099 >seq5 Length=2217437 Score = 132 bits (146), Expect = 4e-26 Identities = 160/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || || | ||||| |||||||||| || || || | ||||| ||| | || Sbjct 75642 ATGCAAATTTTCGTCAAAACCTTAACCGGTAAGACCATCACTTTGGAAGTCGAATCTTCC 75583 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||| |||||||||||||| || ||||| || ||| Sbjct 75582 GACACCATCGATAACGTCAAGTCTAAGATTCAAGACAAAGAAGGTATTCCTCCAGACCAA 75523 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||| | || || ||||| || || ||| |||| ||| |||| | |||| || |||||| Sbjct 75522 CAAAGATTAATTTTTGCAGGTAAGCAGTTGGAAGATAGCAGAACCTTGTCTGACTATAAC 75463 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATT 24921 || ||||||||||| || |||| | || ||| |||| Sbjct 75462 ATCCAAAAGGAATCCACTTTACATCTTGTCTTGAGATT 75425 Score = 132 bits (146), Expect = 4e-26 Identities = 160/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || || |||| || |||| ||||| ||||| || | ||||| ||| | | Sbjct 76098 ATGCAAATTTTCGTTAAGACTTTAACTGGTAAGACTATCACTTTGGAAGTTGAATCTTCT 76039 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || ||| ||||| |||||||||||||| || ||||| || ||| Sbjct 76038 GACACCATCGATAACGTGAAATCGAAGATTCAAGACAAAGAAGGTATCCCTCCAGACCAA 75979 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||| | || || ||||| || || ||| |||| ||| |||| | |||| || |||||| Sbjct 75978 CAAAGATTAATTTTTGCAGGTAAGCAGTTGGAAGATGGCAGAACCTTGTCTGACTATAAC 75919 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATT 24921 || ||||||||||| || |||| | || ||| |||| Sbjct 75918 ATCCAAAAGGAATCCACTTTACATCTTGTCTTGAGATT 75881 Score = 127 bits (140), Expect = 2e-24 Identities = 159/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || || | ||||| |||||||||| || || || | ||||| ||| | | Sbjct 75186 ATGCAAATTTTCGTCAAAACCTTAACCGGTAAGACCATCACTTTGGAAGTTGAATCTTCT 75127 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||| |||||||||||||| || ||||| || ||| Sbjct 75126 GACACCATCGATAACGTCAAGTCTAAGATTCAAGACAAAGAAGGTATTCCTCCAGACCAA 75067 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||| | || || ||||| || || ||| |||| ||| |||| | |||| || |||||| Sbjct 75066 CAAAGATTAATTTTTGCAGGTAAGCAGTTGGAAGATGGCAGAACCTTGTCTGACTATAAC 75007 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATT 24921 || ||||||||||| || |||| | || ||| |||| Sbjct 75006 ATCCAAAAGGAATCCACTTTACATCTTGTCTTGAGATT 74969 Score = 118 bits (130), Expect = 1e-21 Identities = 157/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || || | ||||| | || ||||| || || || | ||||| ||| | || Sbjct 75414 ATGCAAATTTTCGTCAAAACCTTGACTGGTAAGACCATCACTTTGGAAGTCGAATCTTCC 75355 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || ||| ||||| |||||||||||||| || ||||| || ||| Sbjct 75354 GACACCATCGATAACGTGAAATCGAAGATTCAAGACAAAGAAGGTATCCCTCCAGACCAA 75295 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||| | || || ||||| || || ||| |||| ||| |||| | |||| || |||||| Sbjct 75294 CAAAGATTAATTTTTGCAGGTAAGCAGTTGGAAGATGGCAGAACCTTGTCTGACTATAAC 75235 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATT 24921 || ||||| ||||| || | || | || ||| |||| Sbjct 75234 ATCCAAAAAGAATCCACTTTGCATCTTGTTTTGAGATT 75197 Score = 118 bits (130), Expect = 1e-21 Identities = 157/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || || | ||||| | || ||||| || || || | ||||| ||| | || Sbjct 75870 ATGCAAATTTTCGTCAAAACCTTGACTGGTAAGACCATCACTTTGGAAGTCGAATCTTCC 75811 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || ||| ||||| |||||||||||||| || ||||| || ||| Sbjct 75810 GACACCATCGATAACGTGAAATCGAAGATTCAAGACAAAGAAGGTATCCCTCCAGACCAA 75751 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||| | || || ||||| || || ||| |||| ||| |||| | |||| ||||| ||| Sbjct 75750 CAAAGATTAATTTTTGCAGGTAAGCAGTTGGAAGATGGAAGAACCTTGTCCGATTACAAC 75691 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATT 24921 || ||||| ||||| || | || | || ||| |||| Sbjct 75690 ATCCAAAAAGAATCCACTTTGCATCTTGTTTTGAGATT 75653 >seq1 Length=1050866 Score = 118 bits (130), Expect = 1e-21 Identities = 148/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 24728 ACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACGGTAAAACAA 24787 || ||||| || || || | ||||| ||| | ||||||| | || | || || Sbjct 59658 ACTGGTAAGACCATCACTTTGGAAGTCGAATCTTCCGACACCATTGACAATGTCAAGTCT 59717 Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847 ||||| |||||||| ||||| || || || || |||||| | ||||||||||| || || Sbjct 59718 AAGATTCAAGACAAGGAAGGTATCCCACCAGACCAACAAAGATTGATCTTTGCTGGTAAG 59777 Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACAC 24907 || |||| ||| |||| | |||| || || ||||| ||||||||||| || | ||| Sbjct 59778 CAATTGGAAGATGGTAGAACCTTGTCTGACTACAACATCCAAAAGGAATCCACTTTGCAC 59837 Query 24908 TTGGTGTTGCGATTGCGCGGAGG 24930 ||||| ||| ||||| | || || Sbjct 59838 TTGGTTTTGAGATTGAGAGGTGG 59860 >seq3 Length=1752996 Score = 111 bits (122), Expect = 1e-19 Identities = 695/1099 (63%), Gaps = 29/1099 (3%) Strand=Plus/Plus Query 138150 AGATTTATCTACAGTAAACTTTATGGCATCAGCGGCTGGTTTCGTTCTCAGATAATACAT 138209 ||| ||||| | |||||| | || ||| ||| || | || ||||| || || ||||| Sbjct 675412 AGACTTATCGATAGTAAATTGAATTGCAGCAGATGCAGCTTGTGTTCTTAGGTAGTACAT 675471 Query 138210 TCCCGTTTTTAACCCATTTTCCCAGGCGTACATGTGTATCGAAGTGAG-TAACGCGTAAG 138268 || || || || || |||| ||| |||| | || || ||||| | | || | | | Sbjct 675472 ACCAGTCTTCAAACCCTTTTTCCATCCGTAGAAATGCATGGAAGTTAACTTACCCATG-G 675530 Query 138269 TCGGTTTCGCCAGAA-AT--ATGTTAAACGATTGACTCTGATCGATGAAAGCGCCTCGAT 138325 | ||| || ||| || || || || |||||| ||||| ||| |||| | || | Sbjct 675531 TTGGT---GCACGAATATGGATATTTAAGGATTGAGATTGATCAATGTAAGCAGCACGGT 675587 Query 138326 CAATGGCCATGTTAATTAAATTTTTACTTTT----CATCTCCCACACGGTCTTGTATAGA 138381 | ||||||| || | || ||||| || ||||| || ||||||||||| Sbjct 675588 CGGCCGCCATGTCGATAATATG----CTTTTGAGACAATTCCCAAACAGTCTTGTATAGG 675643 Query 138382 TCACGAATATGTCGCGGTATTGTTGCAATATTTTGAATGCTCCCGTTGGCCGCAATGATG 138441 || | | | | || || ||| | || |||||| || ||| | ||||| || Sbjct 675644 TCCTTCAATTCTTGTGGGATATTTGGTAAGTTCTGAATGGAACCATTGTCGGCAATAATA 675703 Query 138442 CGATTTCTCATGTCATCGTTGTACAGATTCAACTTGATCAAGTCGTTTATCAGATATCTG 138501 || | |||| | || | | | | ||| | | |||||| | | | ||| | Sbjct 675704 TGAGATTTCATAGCTTCATCCCAAATACCCAAGTCAACCAAGTCATGCAATAAGTATGGG 675763 Query 138502 TTTATGACCTGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGGC 138561 || | | || || ||||| | ||| || |||||| ||| |||||| ||| | || Sbjct 675764 TTGACAATTTGGAACTCACCAGACAAAACACGACGAGAGTACATGTTGGATGTGTATGGT 675823 Query 138562 TCAAACGATTCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCACC 138621 ||||| ||||||||| |||| ||| |||| |||| || || ||||| || ||| Sbjct 675824 TCAAAACATTCGTTGTAACCCAAAATTTGAGATGTGGATGCTGTTGGCATTGGAGCAACC 675883 Query 138622 AAAAGAGAATTCCGTAAACCGTGAAGCTTGATTCGTTCCTTGAGCGACGACCAGTCCCAC 138681 || | || || | | ||| | | ||||||| |||| || | | ||||||||| Sbjct 675884 AACAATGAGTTTCTCATACCATTCAACTTGATTTGTTCTTTCAAAGTATTCCAGTCCCAT 675943 Query 138682 AAATCGCTAGGTTTTTTGTTCCACATATCGTACTGTAACATTCCCAAACTTGCGGGACTG 138741 | | | | ||| | || ||| | |||| | || || || | ||| ||| Sbjct 675944 AGAGCAGTTGGTGTCTTACCCCATAAATCGAATTGCAATTGACCTTGAGATGCAGGAGAA 676003 Query 138742 CCTTCGTACGAATCGTATACACCAAACTCTTGCGCCAACTCGTTGCTCGCCTCGAGCGCA 138801 ||| | | | || || || |||| ||||| || || || ||| ||| Sbjct 676004 CCTGGGAATGTTTCATAATGGCCTTCTTCTTTGGCCAATTCCATGGAAGCTTCGCAGGCA 676063 Query 138802 CCATAGTAAATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTCGGCGCTCTCGTAC 138861 |||| |||||| |||||| || | || || || || | || | Sbjct 676064 CCATGGTAAATGGTTTCGAAGATTTCAATGTTCAGTTTCTTAGCTTCTTCAGAATCAAAT 676123 Query 138862 GGCATGCGGAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCACTCCGACAGGGCGA 138921 |||| || | |||| | || |||||||| || ||||| || |||| | | ||| | Sbjct 676124 GGCAAACGCAACATCATAAAAGCGTCGGCTAGACCTTGGACACCCAAAGCAATAGGTCTG 676183 Query 138922 TGGCGCAGATTTGACGCTTTTGCGGCTTCGATAGGATAATAGTTTACATCGATGATTTTG 138981 || | || || || | | |||| ||| | || |||||||| || |||||| || Sbjct 676184 TGTCTCATGTTCGATCTTCTAGCGGTTTCAACTGGGTAATAGTTACGGTCTATGATTCTG 676243 Query 138982 TTTAAATTTCGCACGACCACCTTAGTCGTATGCTTTA-ATCGT-TCAAAATCGTATGTGC 139039 || || || || | ||||||| || ||||| | | | | ||||| | |||||| Sbjct 676244 TTCAAGTTGCGTGTTAGTACCTTAG-CG-ATGCTGTGTAGCTTCTCAAAGTTGTATGT-- 676299 Query 139040 CCCCGTTGT--CGTCGAC-GACGT--CGAC-AAATTTGTTGACACAAATCGAGGCTATGT 139093 | ||| | ||||| ||| | | | ||| || | || | | | || || | || Sbjct 676300 CTGAGTTTTTCCGTCGGTAGACCTTTCAATGAAAGCTGGTAACGCGA-TGGAAGCCAAGT 676358 Query 139094 TGCACACCGCCACTTCGTCGGGGTCGCTGTATTCGACAATTTCGGCACACAAATTACTAC 139153 | || || || ||| ||||| |||||||||||||| |||||| || | Sbjct 676359 TACAAACGGCGGTTTCTGTAGGGTCAGAATATTCGACAATTTCACAACACAAGTTTGAAG 676418 Query 139154 ACTTGATCGTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTGTAAAGCA 139213 |||| || ||||| | || | ||||||||| || |||||||||||| |||||||||| Sbjct 676419 ACTTAATGGTACCCAGGTTCTTTTGATTGCTCTTCAAGTTACAAGCATCCTTGTAAAGCA 676478 Query 139214 TATACGGTGTGCCAGTTTC 139232 | |||| || || ||||| Sbjct 676479 TGAACGGAGTACCTGTTTC 676497 >seq6 Length=2601250 Score = 105 bits (116), Expect = 6e-18 Identities = 114/151 (75%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 126029 TGGTCGCTTTCGCTATAGTGGAAGGCGTGTTTTTCTCGGGTAGTTTTGCGGCTAtttttt 126088 |||| ||||||||| |||||||| ||||| ||||| ||| ||||| ||||| || | Sbjct 1394212 TGGTTGCTTTCGCTGCTGTGGAAGGTGTGTTCTTCTCCGGTTCCTTTGCTGCTATCTTCT 1394271 Query 126089 ttATAAAGACAAAGGGTATAATGCCCGGTCTAACGTTCAGCAACGAGTTGATTTCTCGTG 126148 | |||| ||||| ||||||| ||| | || ||| ||||||||||| | | | | Sbjct 1394272 GGTTGAAGAAGAAGGGGTTAATGCCTGGTTTGACTTTCTCTAACGAGTTGATCTGTAGAG 1394331 Query 126149 ACGAAGGACTCCATACGGACTTTGCATGTCT 126179 | ||||| || ||||| |||||||| ||||| Sbjct 1394332 ATGAAGGTCTACATACAGACTTTGCCTGTCT 1394362 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449897560633960