Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20lactis_20[genbank_20GCA_5F002151565.1_202017-05-19]
7 sequences; 10,682,662 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq4 140 3e-28
seq5 132 4e-26
seq1 118 1e-21
seq3 111 1e-19
seq6 105 6e-18
>seq4
Length=1700866
Score = 140 bits (154), Expect = 3e-28
Identities = 169/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| || || | ||||| |||| ||||| || ||||| | ||||| ||| | ||
Sbjct 1530870 ATGCAAATTTTCGTCAAAACCTTAACAGGTAAGACCATTACCTTGGAAGTCGAATCTTCC 1530929
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||||||||| ||||| || ||||| || |||
Sbjct 1530930 GACACCATTGACAATGTTAAGTCTAAGATCCAAGACAAGGAAGGTATTCCTCCAGACCAA 1530989
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
||| | ||||||||||| || || || |||| ||| |||| |||| || || |||
Sbjct 1530990 CAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTACAAC 1531049
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGG 24933
|| ||||||||||| || | |||||||| ||| ||||| | || || ||
Sbjct 1531050 ATCCAAAAGGAATCCACTTTGCACTTGGTCTTGAGATTGAGAGGTGGTGG 1531099
>seq5
Length=2217437
Score = 132 bits (146), Expect = 4e-26
Identities = 160/218 (73%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| || || | ||||| |||||||||| || || || | ||||| ||| | ||
Sbjct 75642 ATGCAAATTTTCGTCAAAACCTTAACCGGTAAGACCATCACTTTGGAAGTCGAATCTTCC 75583
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || ||||| |||||||||||||| || ||||| || |||
Sbjct 75582 GACACCATCGATAACGTCAAGTCTAAGATTCAAGACAAAGAAGGTATTCCTCCAGACCAA 75523
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
||| | || || ||||| || || ||| |||| ||| |||| | |||| || ||||||
Sbjct 75522 CAAAGATTAATTTTTGCAGGTAAGCAGTTGGAAGATAGCAGAACCTTGTCTGACTATAAC 75463
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATT 24921
|| ||||||||||| || |||| | || ||| ||||
Sbjct 75462 ATCCAAAAGGAATCCACTTTACATCTTGTCTTGAGATT 75425
Score = 132 bits (146), Expect = 4e-26
Identities = 160/218 (73%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| || || |||| || |||| ||||| ||||| || | ||||| ||| | |
Sbjct 76098 ATGCAAATTTTCGTTAAGACTTTAACTGGTAAGACTATCACTTTGGAAGTTGAATCTTCT 76039
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || ||| ||||| |||||||||||||| || ||||| || |||
Sbjct 76038 GACACCATCGATAACGTGAAATCGAAGATTCAAGACAAAGAAGGTATCCCTCCAGACCAA 75979
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
||| | || || ||||| || || ||| |||| ||| |||| | |||| || ||||||
Sbjct 75978 CAAAGATTAATTTTTGCAGGTAAGCAGTTGGAAGATGGCAGAACCTTGTCTGACTATAAC 75919
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATT 24921
|| ||||||||||| || |||| | || ||| ||||
Sbjct 75918 ATCCAAAAGGAATCCACTTTACATCTTGTCTTGAGATT 75881
Score = 127 bits (140), Expect = 2e-24
Identities = 159/218 (73%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| || || | ||||| |||||||||| || || || | ||||| ||| | |
Sbjct 75186 ATGCAAATTTTCGTCAAAACCTTAACCGGTAAGACCATCACTTTGGAAGTTGAATCTTCT 75127
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || ||||| |||||||||||||| || ||||| || |||
Sbjct 75126 GACACCATCGATAACGTCAAGTCTAAGATTCAAGACAAAGAAGGTATTCCTCCAGACCAA 75067
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
||| | || || ||||| || || ||| |||| ||| |||| | |||| || ||||||
Sbjct 75066 CAAAGATTAATTTTTGCAGGTAAGCAGTTGGAAGATGGCAGAACCTTGTCTGACTATAAC 75007
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATT 24921
|| ||||||||||| || |||| | || ||| ||||
Sbjct 75006 ATCCAAAAGGAATCCACTTTACATCTTGTCTTGAGATT 74969
Score = 118 bits (130), Expect = 1e-21
Identities = 157/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| || || | ||||| | || ||||| || || || | ||||| ||| | ||
Sbjct 75414 ATGCAAATTTTCGTCAAAACCTTGACTGGTAAGACCATCACTTTGGAAGTCGAATCTTCC 75355
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || ||| ||||| |||||||||||||| || ||||| || |||
Sbjct 75354 GACACCATCGATAACGTGAAATCGAAGATTCAAGACAAAGAAGGTATCCCTCCAGACCAA 75295
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
||| | || || ||||| || || ||| |||| ||| |||| | |||| || ||||||
Sbjct 75294 CAAAGATTAATTTTTGCAGGTAAGCAGTTGGAAGATGGCAGAACCTTGTCTGACTATAAC 75235
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATT 24921
|| ||||| ||||| || | || | || ||| ||||
Sbjct 75234 ATCCAAAAAGAATCCACTTTGCATCTTGTTTTGAGATT 75197
Score = 118 bits (130), Expect = 1e-21
Identities = 157/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| || || | ||||| | || ||||| || || || | ||||| ||| | ||
Sbjct 75870 ATGCAAATTTTCGTCAAAACCTTGACTGGTAAGACCATCACTTTGGAAGTCGAATCTTCC 75811
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || ||| ||||| |||||||||||||| || ||||| || |||
Sbjct 75810 GACACCATCGATAACGTGAAATCGAAGATTCAAGACAAAGAAGGTATCCCTCCAGACCAA 75751
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
||| | || || ||||| || || ||| |||| ||| |||| | |||| ||||| |||
Sbjct 75750 CAAAGATTAATTTTTGCAGGTAAGCAGTTGGAAGATGGAAGAACCTTGTCCGATTACAAC 75691
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATT 24921
|| ||||| ||||| || | || | || ||| ||||
Sbjct 75690 ATCCAAAAAGAATCCACTTTGCATCTTGTTTTGAGATT 75653
>seq1
Length=1050866
Score = 118 bits (130), Expect = 1e-21
Identities = 148/203 (73%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 24728 ACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACGGTAAAACAA 24787
|| ||||| || || || | ||||| ||| | ||||||| | || | || ||
Sbjct 59658 ACTGGTAAGACCATCACTTTGGAAGTCGAATCTTCCGACACCATTGACAATGTCAAGTCT 59717
Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847
||||| |||||||| ||||| || || || || |||||| | ||||||||||| || ||
Sbjct 59718 AAGATTCAAGACAAGGAAGGTATCCCACCAGACCAACAAAGATTGATCTTTGCTGGTAAG 59777
Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACAC 24907
|| |||| ||| |||| | |||| || || ||||| ||||||||||| || | |||
Sbjct 59778 CAATTGGAAGATGGTAGAACCTTGTCTGACTACAACATCCAAAAGGAATCCACTTTGCAC 59837
Query 24908 TTGGTGTTGCGATTGCGCGGAGG 24930
||||| ||| ||||| | || ||
Sbjct 59838 TTGGTTTTGAGATTGAGAGGTGG 59860
>seq3
Length=1752996
Score = 111 bits (122), Expect = 1e-19
Identities = 695/1099 (63%), Gaps = 29/1099 (3%)
Strand=Plus/Plus
Query 138150 AGATTTATCTACAGTAAACTTTATGGCATCAGCGGCTGGTTTCGTTCTCAGATAATACAT 138209
||| ||||| | |||||| | || ||| ||| || | || ||||| || || |||||
Sbjct 675412 AGACTTATCGATAGTAAATTGAATTGCAGCAGATGCAGCTTGTGTTCTTAGGTAGTACAT 675471
Query 138210 TCCCGTTTTTAACCCATTTTCCCAGGCGTACATGTGTATCGAAGTGAG-TAACGCGTAAG 138268
|| || || || || |||| ||| |||| | || || ||||| | | || | | |
Sbjct 675472 ACCAGTCTTCAAACCCTTTTTCCATCCGTAGAAATGCATGGAAGTTAACTTACCCATG-G 675530
Query 138269 TCGGTTTCGCCAGAA-AT--ATGTTAAACGATTGACTCTGATCGATGAAAGCGCCTCGAT 138325
| ||| || ||| || || || || |||||| ||||| ||| |||| | || |
Sbjct 675531 TTGGT---GCACGAATATGGATATTTAAGGATTGAGATTGATCAATGTAAGCAGCACGGT 675587
Query 138326 CAATGGCCATGTTAATTAAATTTTTACTTTT----CATCTCCCACACGGTCTTGTATAGA 138381
| ||||||| || | || ||||| || ||||| || |||||||||||
Sbjct 675588 CGGCCGCCATGTCGATAATATG----CTTTTGAGACAATTCCCAAACAGTCTTGTATAGG 675643
Query 138382 TCACGAATATGTCGCGGTATTGTTGCAATATTTTGAATGCTCCCGTTGGCCGCAATGATG 138441
|| | | | | || || ||| | || |||||| || ||| | ||||| ||
Sbjct 675644 TCCTTCAATTCTTGTGGGATATTTGGTAAGTTCTGAATGGAACCATTGTCGGCAATAATA 675703
Query 138442 CGATTTCTCATGTCATCGTTGTACAGATTCAACTTGATCAAGTCGTTTATCAGATATCTG 138501
|| | |||| | || | | | | ||| | | |||||| | | | ||| |
Sbjct 675704 TGAGATTTCATAGCTTCATCCCAAATACCCAAGTCAACCAAGTCATGCAATAAGTATGGG 675763
Query 138502 TTTATGACCTGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGGC 138561
|| | | || || ||||| | ||| || |||||| ||| |||||| ||| | ||
Sbjct 675764 TTGACAATTTGGAACTCACCAGACAAAACACGACGAGAGTACATGTTGGATGTGTATGGT 675823
Query 138562 TCAAACGATTCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCACC 138621
||||| ||||||||| |||| ||| |||| |||| || || ||||| || |||
Sbjct 675824 TCAAAACATTCGTTGTAACCCAAAATTTGAGATGTGGATGCTGTTGGCATTGGAGCAACC 675883
Query 138622 AAAAGAGAATTCCGTAAACCGTGAAGCTTGATTCGTTCCTTGAGCGACGACCAGTCCCAC 138681
|| | || || | | ||| | | ||||||| |||| || | | |||||||||
Sbjct 675884 AACAATGAGTTTCTCATACCATTCAACTTGATTTGTTCTTTCAAAGTATTCCAGTCCCAT 675943
Query 138682 AAATCGCTAGGTTTTTTGTTCCACATATCGTACTGTAACATTCCCAAACTTGCGGGACTG 138741
| | | | ||| | || ||| | |||| | || || || | ||| |||
Sbjct 675944 AGAGCAGTTGGTGTCTTACCCCATAAATCGAATTGCAATTGACCTTGAGATGCAGGAGAA 676003
Query 138742 CCTTCGTACGAATCGTATACACCAAACTCTTGCGCCAACTCGTTGCTCGCCTCGAGCGCA 138801
||| | | | || || || |||| ||||| || || || ||| |||
Sbjct 676004 CCTGGGAATGTTTCATAATGGCCTTCTTCTTTGGCCAATTCCATGGAAGCTTCGCAGGCA 676063
Query 138802 CCATAGTAAATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTCGGCGCTCTCGTAC 138861
|||| |||||| |||||| || | || || || || | || |
Sbjct 676064 CCATGGTAAATGGTTTCGAAGATTTCAATGTTCAGTTTCTTAGCTTCTTCAGAATCAAAT 676123
Query 138862 GGCATGCGGAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCACTCCGACAGGGCGA 138921
|||| || | |||| | || |||||||| || ||||| || |||| | | ||| |
Sbjct 676124 GGCAAACGCAACATCATAAAAGCGTCGGCTAGACCTTGGACACCCAAAGCAATAGGTCTG 676183
Query 138922 TGGCGCAGATTTGACGCTTTTGCGGCTTCGATAGGATAATAGTTTACATCGATGATTTTG 138981
|| | || || || | | |||| ||| | || |||||||| || |||||| ||
Sbjct 676184 TGTCTCATGTTCGATCTTCTAGCGGTTTCAACTGGGTAATAGTTACGGTCTATGATTCTG 676243
Query 138982 TTTAAATTTCGCACGACCACCTTAGTCGTATGCTTTA-ATCGT-TCAAAATCGTATGTGC 139039
|| || || || | ||||||| || ||||| | | | | ||||| | ||||||
Sbjct 676244 TTCAAGTTGCGTGTTAGTACCTTAG-CG-ATGCTGTGTAGCTTCTCAAAGTTGTATGT-- 676299
Query 139040 CCCCGTTGT--CGTCGAC-GACGT--CGAC-AAATTTGTTGACACAAATCGAGGCTATGT 139093
| ||| | ||||| ||| | | | ||| || | || | | | || || | ||
Sbjct 676300 CTGAGTTTTTCCGTCGGTAGACCTTTCAATGAAAGCTGGTAACGCGA-TGGAAGCCAAGT 676358
Query 139094 TGCACACCGCCACTTCGTCGGGGTCGCTGTATTCGACAATTTCGGCACACAAATTACTAC 139153
| || || || ||| ||||| |||||||||||||| |||||| || |
Sbjct 676359 TACAAACGGCGGTTTCTGTAGGGTCAGAATATTCGACAATTTCACAACACAAGTTTGAAG 676418
Query 139154 ACTTGATCGTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTGTAAAGCA 139213
|||| || ||||| | || | ||||||||| || |||||||||||| ||||||||||
Sbjct 676419 ACTTAATGGTACCCAGGTTCTTTTGATTGCTCTTCAAGTTACAAGCATCCTTGTAAAGCA 676478
Query 139214 TATACGGTGTGCCAGTTTC 139232
| |||| || || |||||
Sbjct 676479 TGAACGGAGTACCTGTTTC 676497
>seq6
Length=2601250
Score = 105 bits (116), Expect = 6e-18
Identities = 114/151 (75%), Gaps = 0/151 (0%)
Strand=Plus/Plus
Query 126029 TGGTCGCTTTCGCTATAGTGGAAGGCGTGTTTTTCTCGGGTAGTTTTGCGGCTAtttttt 126088
|||| ||||||||| |||||||| ||||| ||||| ||| ||||| ||||| || |
Sbjct 1394212 TGGTTGCTTTCGCTGCTGTGGAAGGTGTGTTCTTCTCCGGTTCCTTTGCTGCTATCTTCT 1394271
Query 126089 ttATAAAGACAAAGGGTATAATGCCCGGTCTAACGTTCAGCAACGAGTTGATTTCTCGTG 126148
| |||| ||||| ||||||| ||| | || ||| ||||||||||| | | | |
Sbjct 1394272 GGTTGAAGAAGAAGGGGTTAATGCCTGGTTTGACTTTCTCTAACGAGTTGATCTGTAGAG 1394331
Query 126149 ACGAAGGACTCCATACGGACTTTGCATGTCT 126179
| ||||| || ||||| |||||||| |||||
Sbjct 1394332 ATGAAGGTCTACATACAGACTTTGCCTGTCT 1394362
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449897560633960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |