Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20lactis_20[genbank_20GCA_5F002151565.1_202017-05-19] 7 sequences; 10,682,662 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq4 113 4e-20 seq5 98.7 8e-16 >seq4 Length=1700866 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||||||||| |||||||| |||||||| || ||||||||| | ||| || || | Sbjct 1530870 ATGCAAATTTTCGTCAAAACCTTAACAGGTAAGACCATTACCTTGGAAGTCGAATCTTCC 1530929 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || | | | | || || ||||| || || ||||| | || || || Sbjct 1530930 GACACCATTGACAATGTTAAGTCTAAGATCCAAGACAAGGAAGGTATTCCTCCAGACCAA 1530989 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 || ||| | || | ||| ||||| || |||| || | | ||| || | ||||||||| Sbjct 1530990 CAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTACAAC 1531049 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 || |||||||| || || |||||| |||| ||||||||| |||| || Sbjct 1531050 ATCCAAAAGGAATCCACTTTGCACTTGGTCTTGAGATTGAGAGGTGG 1531096 >seq5 Length=2217437 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||||||||| |||||||| || || || || ||||| || | ||| || || | Sbjct 75414 ATGCAAATTTTCGTCAAAACCTTGACTGGTAAGACCATCACTTTGGAAGTCGAATCTTCC 75355 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || ||| | || ||| |||||| || |||||||| | || || || Sbjct 75354 GACACCATCGATAACGTGAAATCGAAGATTCAAGACAAAGAAGGTATCCCTCCAGACCAA 75295 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 || ||| | |||| ||| ||||| ||| |||| || | || ||| || | ||||| ||| Sbjct 75294 CAAAGATTAATTTTTGCAGGTAAGCAGTTGGAAGATGGCAGAACCTTGTCTGACTATAAC 75235 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 || ||||| || || || ||||| | || |||||||| |||| || Sbjct 75234 ATCCAAAAAGAATCCACTTTGCATCTTGTTTTGAGATTAAGAGGTGG 75188 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||||||||| |||||||| ||||| || || ||||| || | ||| || || Sbjct 75186 ATGCAAATTTTCGTCAAAACCTTAACCGGTAAGACCATCACTTTGGAAGTTGAATCTTCT 75127 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || ||| | || || |||||| || |||||||| | || || || Sbjct 75126 GACACCATCGATAACGTCAAGTCTAAGATTCAAGACAAAGAAGGTATTCCTCCAGACCAA 75067 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 || ||| | |||| ||| ||||| ||| |||| || | || ||| || | ||||| ||| Sbjct 75066 CAAAGATTAATTTTTGCAGGTAAGCAGTTGGAAGATGGCAGAACCTTGTCTGACTATAAC 75007 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 || |||||||| || || || || | || |||||||| |||| || Sbjct 75006 ATCCAAAAGGAATCCACTTTACATCTTGTCTTGAGATTAAGAGGTGG 74960 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||||||||| |||||||| ||||| || || ||||| || | ||| || || | Sbjct 75642 ATGCAAATTTTCGTCAAAACCTTAACCGGTAAGACCATCACTTTGGAAGTCGAATCTTCC 75583 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || ||| | || || |||||| || |||||||| | || || || Sbjct 75582 GACACCATCGATAACGTCAAGTCTAAGATTCAAGACAAAGAAGGTATTCCTCCAGACCAA 75523 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 || ||| | |||| ||| ||||| ||| |||| || || ||| || | ||||| ||| Sbjct 75522 CAAAGATTAATTTTTGCAGGTAAGCAGTTGGAAGATAGCAGAACCTTGTCTGACTATAAC 75463 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 || |||||||| || || || || | || |||||||| |||| || Sbjct 75462 ATCCAAAAGGAATCCACTTTACATCTTGTCTTGAGATTAAGAGGTGG 75416 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||||||||| |||||||| || || || || ||||| || | ||| || || | Sbjct 75870 ATGCAAATTTTCGTCAAAACCTTGACTGGTAAGACCATCACTTTGGAAGTCGAATCTTCC 75811 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || ||| | || ||| |||||| || |||||||| | || || || Sbjct 75810 GACACCATCGATAACGTGAAATCGAAGATTCAAGACAAAGAAGGTATCCCTCCAGACCAA 75751 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 || ||| | |||| ||| ||||| ||| |||| || | | ||| || | || |||||| Sbjct 75750 CAAAGATTAATTTTTGCAGGTAAGCAGTTGGAAGATGGAAGAACCTTGTCCGATTACAAC 75691 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 || ||||| || || || ||||| | || |||||||| |||| || Sbjct 75690 ATCCAAAAAGAATCCACTTTGCATCTTGTTTTGAGATTAAGAGGTGG 75644 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 107553 AAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCT 107612 || ||||||||||| || || |||||||| || || || || || | ||| || || Sbjct 76101 AACATGCAAATTTTCGTTAAGACTTTAACTGGTAAGACTATCACTTTGGAAGTTGAATCT 76042 Query 107613 GGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGAT 107672 || || ||| | || ||| |||||| || |||||||| | || || Sbjct 76041 TCTGACACCATCGATAACGTGAAATCGAAGATTCAAGACAAAGAAGGTATCCCTCCAGAC 75982 Query 107673 CAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTAC 107732 || || ||| | |||| ||| ||||| ||| |||| || | || ||| || | ||||| Sbjct 75981 CAACAAAGATTAATTTTTGCAGGTAAGCAGTTGGAAGATGGCAGAACCTTGTCTGACTAT 75922 Query 107733 AACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 ||||| |||||||| || || || || | || |||||||| |||| || Sbjct 75921 AACATCCAAAAGGAATCCACTTTACATCTTGTCTTGAGATTAAGAGGTGG 75872 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398876765970823