Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20lactis_20[genbank_20GCA_5F002151565.1_202017-05-19] 7 sequences; 10,682,662 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq1 118 8e-22 seq5 116 3e-21 seq4 116 3e-21 >seq1 Length=1050866 Score = 118 bits (130), Expect = 8e-22 Identities = 159/219 (73%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || ||||| | || ||||| || | |||||||| ||||| ||||| || || | Sbjct 59860 CCACCTCTCAATCTCAAAACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCAGAC 59801 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||| | | ||| || | ||| || |||||| | ||||||||||| || || || || Sbjct 59800 AAGGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGG 59741 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 ||||| || |||||||| ||| || | |||||| | || | ||||| ||| ||| || Sbjct 59740 ATACCTTCCTTGTCTTG-AATCTTAGACTTGACATTGTCAATGGTGTCGGAAGATTCGAC 59682 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAA 29777 ||| | ||| || || || ||||| ||||| || || || Sbjct 59681 TTCCAAAGTGATGGTCTTACCAGTCAAGGTCTTGACGAA 59643 >seq5 Length=2217437 Score = 116 bits (128), Expect = 3e-21 Identities = 146/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 29590 GTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCA 29649 |||||||| ||||| |||||||| || | | ||| | ||| || | || || || Sbjct 74990 GTGGATTCCTTTTGGATGTTATAGTCAGACAAGGTTCTGCCATCTTCCAACTGCTTACCT 75049 Query 29650 GCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTG-TTT 29708 ||| | || |||||||| || || || |||||||| ||||||||||| ||| || | || Sbjct 75050 GCAAAAATTAATCTTTGTTGGTCTGGAGGAATACCTTCTTTGTCTTG-AATCTTAGACTT 75108 Query 29709 GACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGT 29768 ||| | || | ||||||||| ||| ||||| | ||| || || || || |||||||| Sbjct 75109 GACGTTATCGATGGTGTCAGAAGATTCAACTTCCAAAGTGATGGTCTTACCGGTTAAGGT 75168 Query 29769 TTTAACAAATATCTGCAT 29786 ||| || || || ||||| Sbjct 75169 TTTGACGAAAATTTGCAT 75186 Score = 116 bits (128), Expect = 3e-21 Identities = 148/201 (74%), Gaps = 2/201 (1%) Strand=Plus/Plus Query 29590 GTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCA 29649 |||||||| ||||| |||||||| || | | ||| | ||| || | || || || Sbjct 75902 GTGGATTCCTTTTGGATGTTATAGTCAGACAAGGTTCTGCCATCTTCCAACTGCTTACCT 75961 Query 29650 GCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTG-TTT 29708 ||| | || |||||||| || || || || ||||| ||||||||||| ||| || | ||| Sbjct 75962 GCAAAAATTAATCTTTGTTGGTCTGGAGGGATACCTTCTTTGTCTTG-AATCTTCGATTT 76020 Query 29709 GACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGT 29768 || | || | ||||||||| ||| ||||| | ||| ||||| || |||||||| || Sbjct 76021 CACGTTATCGATGGTGTCAGAAGATTCAACTTCCAAAGTGATAGTCTTACCAGTTAAAGT 76080 Query 29769 TTTAACAAATATCTGCATTTT 29789 ||||| || || ||||| || Sbjct 76081 CTTAACGAAAATTTGCATGTT 76101 Score = 111 bits (122), Expect = 1e-19 Identities = 145/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 29590 GTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCA 29649 |||||||||||||| |||||||| || | | ||| | ||| || | || || || Sbjct 75218 GTGGATTCTTTTTGGATGTTATAGTCAGACAAGGTTCTGCCATCTTCCAACTGCTTACCT 75277 Query 29650 GCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTG-TTT 29708 ||| | || |||||||| || || || || ||||| ||||||||||| ||| || | ||| Sbjct 75278 GCAAAAATTAATCTTTGTTGGTCTGGAGGGATACCTTCTTTGTCTTG-AATCTTCGATTT 75336 Query 29709 GACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGT 29768 || | || | ||||| ||| ||| ||||| | ||| || || || ||||| ||||| Sbjct 75337 CACGTTATCGATGGTGTCGGAAGATTCGACTTCCAAAGTGATGGTCTTACCAGTCAAGGT 75396 Query 29769 TTTAACAAATATCTGCAT 29786 ||| || || || ||||| Sbjct 75397 TTTGACGAAAATTTGCAT 75414 Score = 111 bits (122), Expect = 1e-19 Identities = 145/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 29590 GTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCA 29649 |||||||| ||||| |||||||| || | | ||| | ||| || | || || || Sbjct 75446 GTGGATTCCTTTTGGATGTTATAGTCAGACAAGGTTCTGCTATCTTCCAACTGCTTACCT 75505 Query 29650 GCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTG-TTT 29708 ||| | || |||||||| || || || |||||||| ||||||||||| ||| || | || Sbjct 75506 GCAAAAATTAATCTTTGTTGGTCTGGAGGAATACCTTCTTTGTCTTG-AATCTTAGACTT 75564 Query 29709 GACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGT 29768 ||| | || | ||||| ||| ||| ||||| | ||| || || || || |||||||| Sbjct 75565 GACGTTATCGATGGTGTCGGAAGATTCGACTTCCAAAGTGATGGTCTTACCGGTTAAGGT 75624 Query 29769 TTTAACAAATATCTGCAT 29786 ||| || || || ||||| Sbjct 75625 TTTGACGAAAATTTGCAT 75642 Score = 111 bits (122), Expect = 1e-19 Identities = 145/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 29590 GTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCA 29649 |||||||||||||| ||||| ||||| | | ||| | ||| || | || || || Sbjct 75674 GTGGATTCTTTTTGGATGTTGTAATCGGACAAGGTTCTTCCATCTTCCAACTGCTTACCT 75733 Query 29650 GCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTG-TTT 29708 ||| | || |||||||| || || || || ||||| ||||||||||| ||| || | ||| Sbjct 75734 GCAAAAATTAATCTTTGTTGGTCTGGAGGGATACCTTCTTTGTCTTG-AATCTTCGATTT 75792 Query 29709 GACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGT 29768 || | || | ||||| ||| ||| ||||| | ||| || || || ||||| ||||| Sbjct 75793 CACGTTATCGATGGTGTCGGAAGATTCGACTTCCAAAGTGATGGTCTTACCAGTCAAGGT 75852 Query 29769 TTTAACAAATATCTGCAT 29786 ||| || || || ||||| Sbjct 75853 TTTGACGAAAATTTGCAT 75870 >seq4 Length=1700866 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || ||||| | || ||||| || | |||||||| ||||| ||||| || || | Sbjct 1531096 CCACCTCTCAATCTCAAGACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCGGAC 1531037 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || | | ||| || | ||| || |||||| | ||||||||||| || || || ||| Sbjct 1531036 AAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGAGGA 1530977 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 ||||| || |||||||| | || || ||| | || | ||||| ||| ||| ||| Sbjct 1530976 ATACCTTCCTTGTCTTGGATCTTAGACTTAACATTGTCAATGGTGTCGGAAGATTCGACT 1530917 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || | || || || || || ||||||||||| || || || ||||| Sbjct 1530916 TCCAAGGTAATGGTCTTACCTGTTAAGGTTTTGACGAAAATTTGCAT 1530870 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385219167135987