Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20lactis_20[genbank_20GCA_5F002151565.1_202017-05-19]
7 sequences; 10,682,662 total letters
Query= NC_023442.1
Length=120420
Score E
Sequences producing significant alignments: (Bits) Value
seq1 118 8e-22
seq5 116 3e-21
seq4 116 3e-21
>seq1
Length=1050866
Score = 118 bits (130), Expect = 8e-22
Identities = 159/219 (73%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| || ||||| | || ||||| || | |||||||| ||||| ||||| || || |
Sbjct 59860 CCACCTCTCAATCTCAAAACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCAGAC 59801
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| ||| | | ||| || | ||| || |||||| | ||||||||||| || || || ||
Sbjct 59800 AAGGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGG 59741
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
||||| || |||||||| ||| || | |||||| | || | ||||| ||| ||| ||
Sbjct 59740 ATACCTTCCTTGTCTTG-AATCTTAGACTTGACATTGTCAATGGTGTCGGAAGATTCGAC 59682
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAA 29777
||| | ||| || || || ||||| ||||| || || ||
Sbjct 59681 TTCCAAAGTGATGGTCTTACCAGTCAAGGTCTTGACGAA 59643
>seq5
Length=2217437
Score = 116 bits (128), Expect = 3e-21
Identities = 146/198 (74%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 29590 GTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCA 29649
|||||||| ||||| |||||||| || | | ||| | ||| || | || || ||
Sbjct 74990 GTGGATTCCTTTTGGATGTTATAGTCAGACAAGGTTCTGCCATCTTCCAACTGCTTACCT 75049
Query 29650 GCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTG-TTT 29708
||| | || |||||||| || || || |||||||| ||||||||||| ||| || | ||
Sbjct 75050 GCAAAAATTAATCTTTGTTGGTCTGGAGGAATACCTTCTTTGTCTTG-AATCTTAGACTT 75108
Query 29709 GACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGT 29768
||| | || | ||||||||| ||| ||||| | ||| || || || || ||||||||
Sbjct 75109 GACGTTATCGATGGTGTCAGAAGATTCAACTTCCAAAGTGATGGTCTTACCGGTTAAGGT 75168
Query 29769 TTTAACAAATATCTGCAT 29786
||| || || || |||||
Sbjct 75169 TTTGACGAAAATTTGCAT 75186
Score = 116 bits (128), Expect = 3e-21
Identities = 148/201 (74%), Gaps = 2/201 (1%)
Strand=Plus/Plus
Query 29590 GTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCA 29649
|||||||| ||||| |||||||| || | | ||| | ||| || | || || ||
Sbjct 75902 GTGGATTCCTTTTGGATGTTATAGTCAGACAAGGTTCTGCCATCTTCCAACTGCTTACCT 75961
Query 29650 GCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTG-TTT 29708
||| | || |||||||| || || || || ||||| ||||||||||| ||| || | |||
Sbjct 75962 GCAAAAATTAATCTTTGTTGGTCTGGAGGGATACCTTCTTTGTCTTG-AATCTTCGATTT 76020
Query 29709 GACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGT 29768
|| | || | ||||||||| ||| ||||| | ||| ||||| || |||||||| ||
Sbjct 76021 CACGTTATCGATGGTGTCAGAAGATTCAACTTCCAAAGTGATAGTCTTACCAGTTAAAGT 76080
Query 29769 TTTAACAAATATCTGCATTTT 29789
||||| || || ||||| ||
Sbjct 76081 CTTAACGAAAATTTGCATGTT 76101
Score = 111 bits (122), Expect = 1e-19
Identities = 145/198 (73%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 29590 GTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCA 29649
|||||||||||||| |||||||| || | | ||| | ||| || | || || ||
Sbjct 75218 GTGGATTCTTTTTGGATGTTATAGTCAGACAAGGTTCTGCCATCTTCCAACTGCTTACCT 75277
Query 29650 GCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTG-TTT 29708
||| | || |||||||| || || || || ||||| ||||||||||| ||| || | |||
Sbjct 75278 GCAAAAATTAATCTTTGTTGGTCTGGAGGGATACCTTCTTTGTCTTG-AATCTTCGATTT 75336
Query 29709 GACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGT 29768
|| | || | ||||| ||| ||| ||||| | ||| || || || ||||| |||||
Sbjct 75337 CACGTTATCGATGGTGTCGGAAGATTCGACTTCCAAAGTGATGGTCTTACCAGTCAAGGT 75396
Query 29769 TTTAACAAATATCTGCAT 29786
||| || || || |||||
Sbjct 75397 TTTGACGAAAATTTGCAT 75414
Score = 111 bits (122), Expect = 1e-19
Identities = 145/198 (73%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 29590 GTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCA 29649
|||||||| ||||| |||||||| || | | ||| | ||| || | || || ||
Sbjct 75446 GTGGATTCCTTTTGGATGTTATAGTCAGACAAGGTTCTGCTATCTTCCAACTGCTTACCT 75505
Query 29650 GCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTG-TTT 29708
||| | || |||||||| || || || |||||||| ||||||||||| ||| || | ||
Sbjct 75506 GCAAAAATTAATCTTTGTTGGTCTGGAGGAATACCTTCTTTGTCTTG-AATCTTAGACTT 75564
Query 29709 GACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGT 29768
||| | || | ||||| ||| ||| ||||| | ||| || || || || ||||||||
Sbjct 75565 GACGTTATCGATGGTGTCGGAAGATTCGACTTCCAAAGTGATGGTCTTACCGGTTAAGGT 75624
Query 29769 TTTAACAAATATCTGCAT 29786
||| || || || |||||
Sbjct 75625 TTTGACGAAAATTTGCAT 75642
Score = 111 bits (122), Expect = 1e-19
Identities = 145/198 (73%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 29590 GTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCA 29649
|||||||||||||| ||||| ||||| | | ||| | ||| || | || || ||
Sbjct 75674 GTGGATTCTTTTTGGATGTTGTAATCGGACAAGGTTCTTCCATCTTCCAACTGCTTACCT 75733
Query 29650 GCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTG-TTT 29708
||| | || |||||||| || || || || ||||| ||||||||||| ||| || | |||
Sbjct 75734 GCAAAAATTAATCTTTGTTGGTCTGGAGGGATACCTTCTTTGTCTTG-AATCTTCGATTT 75792
Query 29709 GACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGT 29768
|| | || | ||||| ||| ||| ||||| | ||| || || || ||||| |||||
Sbjct 75793 CACGTTATCGATGGTGTCGGAAGATTCGACTTCCAAAGTGATGGTCTTACCAGTCAAGGT 75852
Query 29769 TTTAACAAATATCTGCAT 29786
||| || || || |||||
Sbjct 75853 TTTGACGAAAATTTGCAT 75870
>seq4
Length=1700866
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| || ||||| | || ||||| || | |||||||| ||||| ||||| || || |
Sbjct 1531096 CCACCTCTCAATCTCAAGACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCGGAC 1531037
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| || | | ||| || | ||| || |||||| | ||||||||||| || || || |||
Sbjct 1531036 AAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGAGGA 1530977
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
||||| || |||||||| | || || ||| | || | ||||| ||| ||| |||
Sbjct 1530976 ATACCTTCCTTGTCTTGGATCTTAGACTTAACATTGTCAATGGTGTCGGAAGATTCGACT 1530917
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| | || || || || || ||||||||||| || || || |||||
Sbjct 1530916 TCCAAGGTAATGGTCTTACCTGTTAAGGTTTTGACGAAAATTTGCAT 1530870
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 385219167135987
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |