Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20lactis_20[genbank_20GCA_5F002151565.1_202017-05-19] 7 sequences; 10,682,662 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq6 114 1e-20 seq5 114 1e-20 >seq6 Length=2601250 Score = 114 bits (126), Expect = 1e-20 Identities = 278/410 (68%), Gaps = 17/410 (4%) Strand=Plus/Plus Query 50307 GTTGAAGGTGTGtttttttCCGGTAGCTTTGCAGCCATATTTTACATTAAAACCTTAGGC 50366 || ||||||||||| || |||||| |||||| || || || | | || | || Sbjct 1394229 GTGGAAGGTGTGTTCTTCTCCGGTTCCTTTGCTGCTATCTTCTGGTTGAAGAAGAAGGGG 1394288 Query 50367 ATAATGCCCGGCCTCACGTTTAGCAACGAGTTGATTTCGCGCGACGAAGGAATGCACACA 50426 ||||||| || | || || ||||||||||| | | || ||||| | || ||| Sbjct 1394289 TTAATGCCTGGTTTGACTTTCTCTAACGAGTTGATCTGTAGAGATGAAGGTCTACATACA 1394348 Query 50427 GACTTTGCGTGTTTGTACTACAATACGCGCGTAAATGAAAAATTATC-ATACGAAACAAT 50485 |||||||| ||| |||| | || | | |||| ||| | | | | | ||| Sbjct 1394349 GACTTTGCCTGT-----CTACTCTTTGCCCATT--TGAAGAATAAACCAAATCCAGAAAT 1394401 Query 50486 TTTGGACATGTTCAA---AGAAGCCGTCGACATCGAAAAAGAGTTT-TTCACGGACGCTT 50541 | |||| | | ||| |||||| ||||| || ||||| ||| | |||| ||| ||| Sbjct 1394402 TGTGGAAAAGATCATTACAGAAGCTGTCGAAATTGAAAA-GAGATACTTCATGGATGCTC 1394460 Query 50542 TACCCGTGGCATTGTTGGGCATGAACGCAGACATGATGTGCGAGTACATTGAGTTTGTTG 50601 ||||||| | | ||||| |||||||||||| | ||| | | ||| | || ||||| | Sbjct 1394461 TACCCGTTTCTCTATTGGGTATGAACGCAGACTTAATGAACCAATACGTGGAATTTGTCG 1394520 Query 50602 CAGACAGATTGTTGTTGCAGCTGGGACAAC-CGAAATACTATAATG-CACGTAACCCCTT 50659 | |||||||| ||| | | || || ||| |||||| | |||| ||| ||||| || Sbjct 1394521 CCGACAGATTATTGGT-CGCCTTGGGTAACAAGAAATATTTCAATGTCAC-CAACCCATT 1394578 Query 50660 TCCGTTTATGAATAACATATCGTTGGAGGGCAAAACAAACTTTTTCGAAA 50709 || ||| | || || || |||| || || || ||||||||||||| Sbjct 1394579 CGATTTCATGGAAAATATCTCCTTGGCTGGTAAGACCAACTTTTTCGAAA 1394628 >seq5 Length=2217437 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244 || |||| ||| | |||||| | ||| | || ||||||||||| |||||||||||| | Sbjct 75644 CCACCTCTTAATCTCAAAACAAGATGCAAAGTGGATTCTTTTTGGATGTTGTAATCGGAC 75703 Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304 | || || ||||| | || ||||| ||| | || | | ||| || || ||||| Sbjct 75704 AAGGTTCTTCCATCTTCCAACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAGGG 75763 Query 137305 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACT 137364 || ||||||||||| ||| || ||| | | || | ||||| | | ||| ||| Sbjct 75764 ATACCTTCTTTGTCTTGAATCTTCGATTTCACGTTATCGATGGTGTCGGAAGATTCGACT 75823 Query 137365 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 137412 || | ||| | ||||| || ||||| ||||| ||||| ||||||||| Sbjct 75824 TCCAAAGTGATGGTCTTACCAGTCAAGGTTTTGACGAAAATTTGCATA 75871 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244 || |||| ||| | |||||| | ||| | || ||||||||||| ||||| || || | Sbjct 75188 CCACCTCTTAATCTCAAAACAAGATGCAAAGTGGATTCTTTTTGGATGTTATAGTCAGAC 75247 Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304 | || || ||||| | || ||||| ||| | || | | ||| || || ||||| Sbjct 75248 AAGGTTCTGCCATCTTCCAACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAGGG 75307 Query 137305 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACT 137364 || ||||||||||| ||| || ||| | | || | ||||| | | ||| ||| Sbjct 75308 ATACCTTCTTTGTCTTGAATCTTCGATTTCACGTTATCGATGGTGTCGGAAGATTCGACT 75367 Query 137365 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 137412 || | ||| | ||||| || ||||| ||||| ||||| ||||||||| Sbjct 75368 TCCAAAGTGATGGTCTTACCAGTCAAGGTTTTGACGAAAATTTGCATA 75415 Score = 89.7 bits (98), Expect = 5e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 137184 GCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCT 137243 ||| |||| ||| | ||| || | ||| | || ||||| ||||| ||||| || || Sbjct 74959 GCCACCTCTTAATCTCAAGACAAGATGTAAAGTGGATTCCTTTTGGATGTTATAGTCAGA 75018 Query 137244 CATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 137303 || || || ||||| | || ||||| ||| | || | | ||| || || ||||| Sbjct 75019 CAAGGTTCTGCCATCTTCCAACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAGG 75078 Query 137304 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTAC 137363 || ||||||||||| ||| || || | | || | ||||| | | ||| || Sbjct 75079 AATACCTTCTTTGTCTTGAATCTTAGACTTGACGTTATCGATGGTGTCAGAAGATTCAAC 75138 Query 137364 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 137412 ||| | ||| | ||||| ||||| || ||||| ||||| ||||||||| Sbjct 75139 TTCCAAAGTGATGGTCTTACCGGTTAAGGTTTTGACGAAAATTTGCATA 75187 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244 || |||| ||| | ||| || | ||| | || ||||| ||||| ||||| || || | Sbjct 75416 CCACCTCTTAATCTCAAGACAAGATGTAAAGTGGATTCCTTTTGGATGTTATAGTCAGAC 75475 Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304 | || || ||||| | || ||||| ||| | || | | ||| || || ||||| Sbjct 75476 AAGGTTCTGCTATCTTCCAACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAGGA 75535 Query 137305 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACT 137364 || ||||||||||| ||| || || | | || | ||||| | | ||| ||| Sbjct 75536 ATACCTTCTTTGTCTTGAATCTTAGACTTGACGTTATCGATGGTGTCGGAAGATTCGACT 75595 Query 137365 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 137412 || | ||| | ||||| ||||| || ||||| ||||| ||||||||| Sbjct 75596 TCCAAAGTGATGGTCTTACCGGTTAAGGTTTTGACGAAAATTTGCATA 75643 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488543957252400