Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20lactis_20[genbank_20GCA_5F002151565.1_202017-05-19]
7 sequences; 10,682,662 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq6 163 7e-35
seq3 145 2e-29
seq5 91.5 3e-13
>seq6
Length=2601250
Score = 163 bits (180), Expect = 7e-35
Identities = 408/612 (67%), Gaps = 11/612 (2%)
Strand=Plus/Plus
Query 110514 TTGGCTTCTTGCTTTCTTCTAGGAATTAACGATGATTCTATTGAAGGTATTTATGATGCT 110573
||| | || || || ||| | || || | || ||||| || || || ||||| | |
Sbjct 109975 TTGTCATCATGTTTCCTTGTTGGGATGGAAGACGATTCCATAGACGGAATTTACAAAACG 110034
Query 110574 CTTAAAGAA-ACTGCTCTTATTTCTAAAAACTCTGGAGGAATTGGTATTCACGTTCATGA 110632
||| | || || ||| | || || || ||||| || | || || |||||| |
Sbjct 110035 -TTACATAAGACCGCTTTGATCTCGAAGGCATCTGGTGGTGTCGGGATACACGTTTCAAA 110093
Query 110633 TATTCGCTCAAAAGGAGCAAATATCGCAACAGCGAAGGGTGCTTCAACTGGACTTGTTCC 110692
||| || |||| |||||| ||||| || | || || | || | ||| ||||| ||
Sbjct 110094 TATCCGTGCAAATGGAGCATATATCTCAGGTTCCAACGGAACATCCAATGGCCTTGTGCC 110153
Query 110693 AATGTTAAGAGTCTTCAACGACACTGCAAAATATGTGAATCAAGGTGG---TAAGAGAAA 110749
||||||||| || ||||| ||||||| | ||||| |||||||||| ||| |||
Sbjct 110154 AATGTTAAGGGTTTTCAATAACACTGCCAGGTATGTTGATCAAGGTGGAAATAAAAGACC 110213
Query 110750 TGGCTCATTTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGAACT 110809
|| |||| ||| ||| | || || |||||| |||| ||| |||| ||||| ||||
Sbjct 110214 AGGAGCATTCTGTATATATTTGGAGCCCTGGCATGCAGACATAATTGACTTCTTGCAACT 110273
Query 110810 TCGTAAAAATCAAGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGTGGAT 110869
| || ||||| || || ||| || ||| | ||||| |||||||| | |||||
Sbjct 110274 GAGAAAGAATCATGGCAAAGAGGAAATGAGGGCAAGAGATTTGTTTTATGCCCTCTGGAT 110333
Query 110870 TTCAGATTTATTCATGAAACGTGTTCAAGAAAATGGCATGTGGTCTCTTATGTGTCCTCA 110929
| ||| | || ||||| || ||| | | |||| ||||| || | | || |
Sbjct 110334 ACCTGATCTCTTTATGAAGCGGGTTGAGAATAATGAAGACTGGTCAATTTTTTCCCCAGA 110393
Query 110930 TCGTTCTCCTGGTCTATCTGATGTATATGGAAAAGAGTTTGAAGACCTTTACGAAAAATA 110989
| | ||||| ||| ||||| ||||| | || ||||| | ||||| |||| |||
Sbjct 110394 TGAAGCACCTGGGCTAACTGATTGTTATGGTGATGAATTTGATAAGCTTTATGAAAGATA 110453
Query 110990 TGAAAAAGAAGGCAAGTT--TCGCAAACAAATTCCAGCTCAAGAACTTTGGTTCAAAATC 111047
|| |||||| | | || | | ||| |||| ||| ||| || |||||| | ||
Sbjct 110454 CGAGAAAGAA--CTAATTCCTAGGAAAAAAATGAAAGCGCAACAAATTTGGTCAGAGATA 110511
Query 111048 CTTGAATCACAAGTTGAAACTGGAACTCCTTATATTTTGTATAAAGAT-CATATTAATCG 111106
||| || ||| || |||||| || | || | ||||||||| ||| ||||
Sbjct 110512 CTTCAAAGTCAAACGGAGACTGGAGTGCCGTTCATGCTCTATAAAGATGCAT-GTAATAA 110570
Query 111107 CAAATCTAATCA 111118
|||||||||||
Sbjct 110571 AAAATCTAATCA 110582
Score = 114 bits (126), Expect = 3e-20
Identities = 153/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 131794 AATTAAAAAGAAAGCAGAATGGGCTATTAAATGGATTCAAGATGATTCCGCTAATTTTTC 131853
||||||| | || || ||||||||||| | |||||||||||||||| || |||
Sbjct 1394144 AATTAAAGAAAAGGCTGAATGGGCTATCAGATGGATTCAAGATGATGATGCCTTGTTTGG 1394203
Query 131854 TACAAGACTTGTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCAGGTGCTTTCTGTGC 131913
| |||| | || ||||| ||| ||| |||||| | ||||| || ||| | || |||
Sbjct 1394204 TGAAAGATTGGTTGCTTTCGCTGCTGTGGAAGGTGTGTTCTTCTCCGGTTCCTTTGCTGC 1394263
Query 131914 TATCTTTTGGCTTAAGAAGCGTGGATTGATGCCTGGACTCTCATTGTCCAATCAATTCAT 131973
|||||| ||| | |||||| || || |||||||| | | || || || | || ||
Sbjct 1394264 TATCTTCTGGTTGAAGAAGAAGGGGTTAATGCCTGGTTTGACTTTCTCTAACGAGTTGAT 1394323
Query 131974 CTCGAGAGATGAAGCATTGCATACTGAATTTGC 132006
|| |||||||||| | ||||| || |||||
Sbjct 1394324 CTGTAGAGATGAAGGTCTACATACAGACTTTGC 1394356
Score = 109 bits (120), Expect = 1e-18
Identities = 126/170 (74%), Gaps = 0/170 (0%)
Strand=Plus/Minus
Query 305318 GACAATGATTGGGTTCTGTTCAATAGGCAACCATCACTGCATAAAATGTCTATGATGGCT 305377
||||||||| ||||| |||||| | |||||||| || || ||||||||||||||||||
Sbjct 500237 GACAATGATCCAGTTCTTTTCAATCGTCAACCATCCCTTCACAAAATGTCTATGATGGCT 500178
Query 305378 CATAAAGTCAAAGTATTATCTGGATTGACATTTCGATTAAATGTAAGTGCTTGTACGCCT 305437
|| | ||| ||||| | | | || ||| |||| || || || | | ||
Sbjct 500177 CACAGAGTGAAAGTCATGCCATATTCTACCTTTAGATTGAACTTATCTGTCACTTCCCCA 500118
Query 305438 TATAATGCGGATTTTGATGGAGATGAAATGAATATGCATGTACCTCAATC 305487
|||||||| ||||| ||||| || ||||||||| | ||||| || |||||
Sbjct 500117 TATAATGCAGATTTCGATGGTGACGAAATGAATTTACATGTTCCCCAATC 500068
>seq3
Length=1752996
Score = 145 bits (160), Expect = 2e-29
Identities = 462/706 (65%), Gaps = 13/706 (2%)
Strand=Plus/Minus
Query 110304 TATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATCATT 110363
|| || |||||||| || | |||||| |||| || | | || |||| || | |
Sbjct 677259 TACTTCGGTTTCAAGACCTTAGAACGTTCTTACTTGTTGAGAATCGATGGTAAGGTTGCT 677200
Query 110364 GAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTAAA 110423
|||||||| ||||||||| || | | || || |||||||||| || | ||||| ||
Sbjct 677199 GAACGTCCACAACACATGATTATGAGAGTGGCTGTTGGTATTCACGGTAACGATATAGAA 677140
Query 110424 GCTGTTATTGAATGTTATGATGTATTAAGTAAAAAGAAAGCT-ATTCATGCTACTCCTAC 110482
|| | || ||| | || | | ||| || | | | || ||| |||||||
Sbjct 677139 CGAGTATTAGAGACTTACAACCTAATGTCTCAAA-GATATTTCACCCACGCTTCTCCTAC 677081
Query 110483 CCTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTC-TAGGAATTA 110541
| || ||||| || ||| | ||| || | ||||| |||||| | | || |
Sbjct 677080 ATTGTTCAACGCTGGTACTCCTCATCCTCAAATGTCATCTTG-TTTCTTGGTTGCTATGA 677022
Query 110542 ACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCTCTTATTTCTAAAA 110601
| || ||||| || ||||||||||| ||| | | || ||| |||| | || || |||
Sbjct 677021 AAGAGGATTCCATCGAAGGTATTTACGATACCTTGAAGGAATGTGCTATGATCTC-AAAG 676963
Query 110602 ACT-CTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATCGCA 110660
||| |||| || ||||| | ||| |||| | || || || | || | | || ||
Sbjct 676962 ACTGCTGGTGGTATTGGGTTGCACATTCACAACATCCGTTCTACTGGTTCTTACATTGCT 676903
Query 110661 ACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCA 110720
| || || |||| | ||| | |||||||| | | ||||||||| |||||||
Sbjct 676902 GGTACCAACGGAACTTCTAATGGTATCATTCCAATGATCCGTGTCTTCAACAACACTGCT 676843
Query 110721 AAATATGTGAATCAAGGTGGT---AAGAGAAATGGCTCATTTGCTATCTATCTCGAACCT 110777
|| || | ||||||||| |||||| || | || ||| | || | |||||
Sbjct 676842 CGTTACGTTGACCAAGGTGGTAACAAGAGACCAGGTGCCTTCGCTTTATACATTGAACCA 676783
Query 110778 TGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACAA 110837
|||||||| ||||| || || ||| | || | | || ||||| ||| ||||||
Sbjct 676782 TGGCATTCTGATATCTTCGATTTCATTGATATCAGGAAGAATCATGGAAAGGAAGAAATT 676723
Query 110838 AGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCAA 110897
| || | |||||||| |||| |||||||| | ||||| |||||||| | || ||
Sbjct 676722 CGTGCTAGAGATTTATTCCCTGCATTGTGGATTCCTGATTTGTTCATGAAGAGAGTGGAA 676663
Query 110898 GAAAATGGCATG--TGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCTATCTGATGTAT 110955
| || || | ||| | | | | |||| || |||| ||| || |||| | |
Sbjct 676662 AAGAA--CCAGGACTGGACCTTGTTCTCTCCTAATGAAGCTCCCGGTTTACCTGACGCTT 676605
Query 110956 ATGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAAGG 111001
| || |||| |||||||| | || ||| || |||| ||||||
Sbjct 676604 ACGGTGAAGAATTTGAAGAAATGTATGAACGTTACGAAAGAGAAGG 676559
Score = 96.9 bits (106), Expect = 8e-15
Identities = 144/203 (71%), Gaps = 6/203 (3%)
Strand=Plus/Plus
Query 279857 TCTATTCCTCATTTAATGGATGGTTTGAAACCTTCACAGCGTAAGATTATATTCAGTTGT 279916
|||||||| | | | ||||||||||||||| ||| | || |||| | ||
Sbjct 1168205 TCTATTCCCTCTGTTTTAGATGGTTTGAAACCTGGTCAGAGGAAAGTTATCTATGCCTGC 1168264
Query 279917 TTCAAAAGAAAATTGGTAAAGGAAATTCGTGTTGCTCAGTTAGCAGGTTATGTTTCAGAA 279976
|||||| | || ||| || ||||| || ||||| |||| |||||||||||||||
Sbjct 1168265 TTCAAACGTAATTTGAAAAGTGAAATCAAGGTCGCTCAATTAGGTGGTTATGTTTCAGAA 1168324
Query 279977 CATGCAGGTTATCATCACGGTGAAGCGTCTCT---TCAAGGTGCTATTGTAGGTCTTGCC 280033
||| |||| |||||||| |||||| ||| | |||| ||||||| ||||| ||
Sbjct 1168325 CATACAGGGTATCATCATGGTGAACAATCTTTGTATCAA---ACTATTGTCGGTCTAGCT 1168381
Query 280034 CAAGATTTTATGGCTTCAAACAA 280056
|| |||||| | | ||| || ||
Sbjct 1168382 CAGGATTTTGTTGGTTCCAATAA 1168404
>seq5
Length=2217437
Score = 91.5 bits (100), Expect = 3e-13
Identities = 123/168 (73%), Gaps = 4/168 (2%)
Strand=Plus/Plus
Query 305323 TGATTGGGTTCTGTTCAATAGGCAACCATCACTGCATAAAATGTCTATGATGGCTCATAA 305382
|||| ||| || || || || ||||| || |||||| | | ||||| || | ||| |
Sbjct 1899172 TGATGTGGTCCTATTTAACAGACAACCTTCTTTGCATAGATTATCTATTTTGTCGCATTA 1899231
Query 305383 AGTCAAAGTATTATC--TGGATTGACATTTCGATTAAATGTAAGTGCTTGTACGCCTTAT 305440
| | ||| | || |||| ||||| ||||||||| ||| |||||| || ||
Sbjct 1899232 TG-CTAAGATTCGTCCTTGGAGA-ACATTCAGATTAAATGAGTGTGTTTGTACACCATAC 1899289
Query 305441 AATGCGGATTTTGATGGAGATGAAATGAATATGCATGTACCTCAATCA 305488
||||||||||||||||| |||||||||||| | ||||| || ||| ||
Sbjct 1899290 AATGCGGATTTTGATGGTGATGAAATGAATTTACATGTTCCGCAAACA 1899337
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1186812693557727
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |