Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20lactis_20[genbank_20GCA_5F002151565.1_202017-05-19] 7 sequences; 10,682,662 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq5 149 1e-30 seq4 122 2e-22 seq1 116 9e-21 >seq5 Length=2217437 Score = 149 bits (164), Expect = 1e-30 Identities = 154/202 (76%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 |||||| | || || || || |||||||||||||| ||| ||| ||||| |||| Sbjct 75856 CAAAACCTTGACTGGTAAGACCATCACTTTGGAAGTCGAATCTTCCGACACCATCGATAA 75797 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || || ||||||||||| |||||||| || || ||| |||||| | || || Sbjct 75796 CGTGAAATCGAAGATTCAAGACAAAGAAGGTATCCCTCCAGACCAACAAAGATTAATTTT 75737 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 || || |||||||||||||||||||| || ||| ||||||||||| |||| ||||| || Sbjct 75736 TGCAGGTAAGCAGTTGGAAGATGGAAGAACCTTGTCCGATTACAACATCCAAAAAGAATC 75677 Query 206364 TACTCTTCACCTTGTTTTGAGA 206385 ||| | || |||||||||||| Sbjct 75676 CACTTTGCATCTTGTTTTGAGA 75655 Score = 134 bits (148), Expect = 3e-26 Identities = 151/202 (75%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 |||||| | || || || || |||||||||||||| ||| ||||||||| |||| Sbjct 75172 CAAAACCTTAACCGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACCATCGATAA 75113 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||| ||||||||||| |||||||| ||| || ||| |||||| | || || Sbjct 75112 CGTCAAGTCTAAGATTCAAGACAAAGAAGGTATTCCTCCAGACCAACAAAGATTAATTTT 75053 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 || || ||||||||||||||||| || || ||| | || || ||| |||| || || || Sbjct 75052 TGCAGGTAAGCAGTTGGAAGATGGCAGAACCTTGTCTGACTATAACATCCAAAAGGAATC 74993 Query 206364 TACTCTTCACCTTGTTTTGAGA 206385 ||| | || ||||| |||||| Sbjct 74992 CACTTTACATCTTGTCTTGAGA 74971 Score = 131 bits (144), Expect = 4e-25 Identities = 150/202 (74%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 |||||| | || || || || |||||||||||||| ||| ||| ||||| |||| Sbjct 75400 CAAAACCTTGACTGGTAAGACCATCACTTTGGAAGTCGAATCTTCCGACACCATCGATAA 75341 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || || ||||||||||| |||||||| || || ||| |||||| | || || Sbjct 75340 CGTGAAATCGAAGATTCAAGACAAAGAAGGTATCCCTCCAGACCAACAAAGATTAATTTT 75281 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 || || ||||||||||||||||| || || ||| | || || ||| |||| ||||| || Sbjct 75280 TGCAGGTAAGCAGTTGGAAGATGGCAGAACCTTGTCTGACTATAACATCCAAAAAGAATC 75221 Query 206364 TACTCTTCACCTTGTTTTGAGA 206385 ||| | || |||||||||||| Sbjct 75220 CACTTTGCATCTTGTTTTGAGA 75199 Score = 125 bits (138), Expect = 2e-23 Identities = 149/202 (74%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 |||||| | || || || || |||||||||||||| ||| ||| ||||| |||| Sbjct 75628 CAAAACCTTAACCGGTAAGACCATCACTTTGGAAGTCGAATCTTCCGACACCATCGATAA 75569 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||| ||||||||||| |||||||| ||| || ||| |||||| | || || Sbjct 75568 CGTCAAGTCTAAGATTCAAGACAAAGAAGGTATTCCTCCAGACCAACAAAGATTAATTTT 75509 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 || || ||||||||||||||| | || || ||| | || || ||| |||| || || || Sbjct 75508 TGCAGGTAAGCAGTTGGAAGATAGCAGAACCTTGTCTGACTATAACATCCAAAAGGAATC 75449 Query 206364 TACTCTTCACCTTGTTTTGAGA 206385 ||| | || ||||| |||||| Sbjct 75448 CACTTTACATCTTGTCTTGAGA 75427 Score = 122 bits (134), Expect = 2e-22 Identities = 142/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253 || || || || |||||||||||||| ||| ||||||||| |||| || || Sbjct 76074 ACTGGTAAGACTATCACTTTGGAAGTTGAATCTTCTGACACCATCGATAACGTGAAATCG 76015 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||||||||| |||||||| || || ||| |||||| | || || || || ||| Sbjct 76014 AAGATTCAAGACAAAGAAGGTATCCCTCCAGACCAACAAAGATTAATTTTTGCAGGTAAG 75955 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 |||||||||||||| || || ||| | || || ||| |||| || || || ||| | || Sbjct 75954 CAGTTGGAAGATGGCAGAACCTTGTCTGACTATAACATCCAAAAGGAATCCACTTTACAT 75895 Query 206374 CTTGTTTTGAGA 206385 ||||| |||||| Sbjct 75894 CTTGTCTTGAGA 75883 Score = 84.2 bits (92), Expect = 5e-11 Identities = 78/99 (79%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 204757 TCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCC 204816 |||||||||||| || | ||| || ||||| |||| |||||||||| ||| || || || Sbjct 75199 TCTCAAAACAAGATGCAAAGTGGATTCTTTTTGGATGTTATAGTCAGACAAGGTTCTGCC 75258 Query 204817 ATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855 |||||||| |||||| || || || || | | |||||| Sbjct 75259 ATCTTCCAACTGCTTACCTGCAAAAATTAATCTTTGTTG 75297 >seq4 Length=1700866 Score = 122 bits (134), Expect = 2e-22 Identities = 148/202 (73%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 |||||| | ||||| || || || || |||||||| ||| ||| ||||| | || Sbjct 1530884 CAAAACCTTAACAGGTAAGACCATTACCTTGGAAGTCGAATCTTCCGACACCATTGACAA 1530943 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||| ||||| ||||| || ||||| ||| || ||| |||||| | ||||| Sbjct 1530944 TGTTAAGTCTAAGATCCAAGACAAGGAAGGTATTCCTCCAGACCAACAAAGATTGATCTT 1531003 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 || || ||||| ||||||||||| || |||||| |||| |||||| |||| || || || Sbjct 1531004 TGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTACAACATCCAAAAGGAATC 1531063 Query 206364 TACTCTTCACCTTGTTTTGAGA 206385 ||| | ||| | || |||||| Sbjct 1531064 CACTTTGCACTTGGTCTTGAGA 1531085 >seq1 Length=1050866 Score = 116 bits (128), Expect = 9e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253 || || || || |||||||||||||| ||| ||| ||||| | || || ||| Sbjct 59658 ACTGGTAAGACCATCACTTTGGAAGTCGAATCTTCCGACACCATTGACAATGTCAAGTCT 59717 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||||||||| || ||||| || || ||| |||||| | ||||| || || ||| Sbjct 59718 AAGATTCAAGACAAGGAAGGTATCCCACCAGACCAACAAAGATTGATCTTTGCTGGTAAG 59777 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 || ||||||||||| || || ||| | || |||||| |||| || || || ||| | ||| Sbjct 59778 CAATTGGAAGATGGTAGAACCTTGTCTGACTACAACATCCAAAAGGAATCCACTTTGCAC 59837 Query 206374 CTTGTTTTGAGA 206385 | ||||||||| Sbjct 59838 TTGGTTTTGAGA 59849 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181820694005447