Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20lactis_20[genbank_20GCA_5F002151565.1_202017-05-19]
7 sequences; 10,682,662 total letters
Query= NC_026268.1
Length=139132
Score E
Sequences producing significant alignments: (Bits) Value
seq5 105 6e-18
seq4 91.5 1e-13
>seq5
Length=2217437
Score = 105 bits (116), Expect = 6e-18
Identities = 162/229 (71%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234
|||||| | || || ||||| || || || || | ||||| | ||||||||| | |
Sbjct 75870 ATGCAAATTTTCGTCAAAACCTTGACTGGTAAGACCATCACTTTGGAAGTCGAATCTTCC 75811
Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294
|| || ||||| | || ||| || ||| || ||||| ||||| || || || ||
Sbjct 75810 GACACCATCGATAACGTGAAATCGAAGATTCAAGACAAAGAAGGTATCCCTCCAGACCAA 75751
Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAA--TGTCAGCGATTACA 25352
|||||| | |||| | || || || | ||||||| |||| |||| ||||||||
Sbjct 75750 CAAAGATTAATTTTTGCAGGTAAGCAGTTGGAAGATGGAAGAACCTTGTC--CGATTACA 75693
Query 25353 ATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401
| || |||||||||||||| | ||| | || || ||||| ||||| ||
Sbjct 75692 ACATCCAAAAAGAATCCACTTTGCATCTTGTTTTGAGATTAAGAGGTGG 75644
Score = 93.3 bits (102), Expect = 4e-14
Identities = 159/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234
|||||| | || || ||||| || || || || | ||||| | ||||||||| | |
Sbjct 75414 ATGCAAATTTTCGTCAAAACCTTGACTGGTAAGACCATCACTTTGGAAGTCGAATCTTCC 75355
Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294
|| || ||||| | || ||| || ||| || ||||| ||||| || || || ||
Sbjct 75354 GACACCATCGATAACGTGAAATCGAAGATTCAAGACAAAGAAGGTATCCCTCCAGACCAA 75295
Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAA--TGTCAGCGATTACA 25352
|||||| | |||| | || || || | ||||||| |||| |||| | | || |
Sbjct 75294 CAAAGATTAATTTTTGCAGGTAAGCAGTTGGAAGATGGCAGAACCTTGTCTG--ACTATA 75237
Query 25353 ATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401
| || |||||||||||||| | ||| | || || ||||| ||||| ||
Sbjct 75236 ACATCCAAAAAGAATCCACTTTGCATCTTGTTTTGAGATTAAGAGGTGG 75188
>seq4
Length=1700866
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 25174 CATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAA 25233
||||||| | || || ||||| ||||| || || | || || | ||||||||| |
Sbjct 1530869 CATGCAAATTTTCGTCAAAACCTTAACAGGTAAGACCATTACCTTGGAAGTCGAATCTTC 1530928
Query 25234 CGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCA 25293
||| || || || | || || || || || || || ||||| || || || ||
Sbjct 1530929 CGACACCATTGACAATGTTAAGTCTAAGATCCAAGACAAGGAAGGTATTCCTCCAGACCA 1530988
Query 25294 GCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAA 25353
|||||| | || | | || || ||| | ||||||| ||||| | | ||| |||||
Sbjct 1530989 ACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTACAA 1531048
Query 25354 TATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401
|| ||||| |||||||| | || || || || ||||||||||| ||
Sbjct 1531049 CATCCAAAAGGAATCCACTTTGCACTTGGTCTTGAGATTGAGAGGTGG 1531096
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445094361054240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |