Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20lactis_20[genbank_20GCA_5F002151565.1_202017-05-19] 7 sequences; 10,682,662 total letters Query= NC_026430.1 Length=125767 Score E Sequences producing significant alignments: (Bits) Value seq5 113 4e-20 seq4 98.7 8e-16 >seq5 Length=2217437 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 ||||||||||| || ||||| |||||||| |||||||| || ||||| ||| | | Sbjct 75870 ATGCAAATTTTCGTCAAAACCTTGACTGGTAAGACCATCACTTTGGAAGTCGAATCTTCC 75811 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 || | | | | |||||| || ||| ||||||||||| | || || ||| Sbjct 75810 GACACCATCGATAACGTGAAATCGAAGATTCAAGACAAAGAAGGTATCCCTCCAGACCAA 75751 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 ||||| | |||| ||| || || || || |||||| | ||| || |||||||||| Sbjct 75750 CAAAGATTAATTTTTGCAGGTAAGCAGTTGGAAGATGGAAGAACCTTGTCCGATTACAAC 75691 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 || ||||||||||| || | ||| | || ||||| ||| |||| || Sbjct 75690 ATCCAAAAAGAATCCACTTTGCATCTTGTTTTGAGATTAAGAGGTGG 75644 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 ||||||||||| || ||||| |||||||| |||||||| || ||||| ||| | | Sbjct 75414 ATGCAAATTTTCGTCAAAACCTTGACTGGTAAGACCATCACTTTGGAAGTCGAATCTTCC 75355 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 || | | | | |||||| || ||| ||||||||||| | || || ||| Sbjct 75354 GACACCATCGATAACGTGAAATCGAAGATTCAAGACAAAGAAGGTATCCCTCCAGACCAA 75295 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 ||||| | |||| ||| || || || || |||||| | ||| || || || ||| Sbjct 75294 CAAAGATTAATTTTTGCAGGTAAGCAGTTGGAAGATGGCAGAACCTTGTCTGACTATAAC 75235 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 || ||||||||||| || | ||| | || ||||| ||| |||| || Sbjct 75234 ATCCAAAAAGAATCCACTTTGCATCTTGTTTTGAGATTAAGAGGTGG 75188 Score = 87.8 bits (96), Expect = 1e-12 Identities = 158/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 106256 AAAAATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACC 106315 ||| ||||||||||| ||||| || || ||||| ||||| || || ||||| ||| | Sbjct 76102 AAACATGCAAATTTTCGTTAAGACTTTAACTGGTAAGACTATCACTTTGGAAGTTGAATC 76043 Query 106316 CGGCGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGA 106375 || | | | | |||||| || ||| ||||||||||| | || || Sbjct 76042 TTCTGACACCATCGATAACGTGAAATCGAAGATTCAAGACAAAGAAGGTATCCCTCCAGA 75983 Query 106376 TCAACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTA 106435 |||||||| | |||| ||| || || || || |||||| | ||| || || || Sbjct 75982 CCAACAAAGATTAATTTTTGCAGGTAAGCAGTTGGAAGATGGCAGAACCTTGTCTGACTA 75923 Query 106436 CAACATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 ||||| ||||| ||||| || ||||| | || ||||| ||| |||| || Sbjct 75922 TAACATCCAAAAGGAATCCACTTTACATCTTGTCTTGAGATTAAGAGGTGG 75872 >seq4 Length=1700866 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 ||||||||||| || ||||| || || || |||||||||||| ||||| ||| | | Sbjct 1530870 ATGCAAATTTTCGTCAAAACCTTAACAGGTAAGACCATTACCTTGGAAGTCGAATCTTCC 1530929 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 || | ||| | | || || || || ||||| ||||| | || || ||| Sbjct 1530930 GACACCATTGACAATGTTAAGTCTAAGATCCAAGACAAGGAAGGTATTCCTCCAGACCAA 1530989 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 ||||| | || | ||| || || ||||| |||||| || |||| || ||| |||||| Sbjct 1530990 CAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTACAAC 1531049 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 || ||||| ||||| || | || || || ||||| || |||| || Sbjct 1531050 ATCCAAAAGGAATCCACTTTGCACTTGGTCTTGAGATTGAGAGGTGG 1531096 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 402329565676256