Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20lactis_20[genbank_20GCA_5F002151565.1_202017-05-19]
7 sequences; 10,682,662 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq1 105 5e-18
seq3 93.3 3e-14
seq2 84.2 2e-11
>seq1
Length=1050866
Score = 105 bits (116), Expect = 5e-18
Identities = 389/604 (64%), Gaps = 28/604 (5%)
Strand=Plus/Plus
Query 40677 AATTTGAGAAATCAG---TTTCCGTTGCTAACTACaaaaaaaaTGTTTTGGAAAGGCATT 40733
|||||||| ||| | || ||| | || ||||| || | | ||||| |||||| |||
Sbjct 698678 AATTTGAGCAATGATACTTTCCCGCTTCTCACTACGAAGAGAGTGTTTACGAAAGGTATT 698737
Query 40734 GCAGAAGAACTGTTATGGTTTATCAAAGGTTGTACTAATGCTAAGAAATTATCAGAAAGA 40793
|| || ||||||||| | || ||||| | | ||||||||||||||| |
Sbjct 698738 ATTTTGGAGCTCTTATGGTTTGTTGCTGGATGTACAGACGGGAAGAAATTATCAGAACAA 698797
Query 40794 GGAGTGCACATTTGGAATGCGCACAGTTCTAAAACATATTTGT-CTAGCATAGGATTACA 40852
|| || | || ||| | | || ||||| || || || | | || | ||
Sbjct 698798 GGCGTTAAGATATGGGAAGGTAACGGTTCTCGTGAGTACCTGGACTCACTTGGGTTGACT 698857
Query 40853 AGATAGGGATGAAGGTGATCTTGGTCCTGTTTATGGATTTCAGTCGCGACATTTTGGAGC 40912
|| || || || ||| | || || ||||| || || || | | |||||||||| ||
Sbjct 698858 -GACAGAAGAGAGGGGGATTTAGGACCAGTTTACGGGTTCCAATGGAGACATTTTGGGGC 698916
Query 40913 AAAATATGACACTATGTACTC-TGATTATACCAATAAAGGAATGGATCAATTACAGTGCG 40971
||||| | || |||| | |||||||| | |||| | ||||| || ||
Sbjct 698917 CGAATATAAGAC-ATGTGATGATGATTATAGTGGTCAAGGTGTTGATCAGTTGAAGGAGA 698975
Query 40972 TTATAGATACGATTAAATCCGATCCCGATAGCCGACGTATAATATTGTGCGCGTGGAACC 41031
|||| ||| | | || | |||| | | || | ||||| | | || |||||||
Sbjct 698976 TTATTCATAAGTTGAAGACAAATCCATACGACAGAAGAATAATTCTTTCTGCATGGAACC 699035
Query 41032 CAACGGACGTACATTTGATGGCATTGCCACCTTGTCATTTGTTATGTCAGTTTTACGTTT 41091
| |||| | | |||||| || || || || ||| | || | || ||||||||
Sbjct 699036 CTCCGGATTTCCCCAAGATGGCTTTACCGCCATGCCATGTTTTCTCGCAATTTTACGTCA 699095
Query 41092 G------CA------ATGGTG---AAC------TGTCATGTCAATTGTATCAAAGATCAG 41130
| || | |||| ||| |||||||| | | ||||| ||||||
Sbjct 699096 GTTTCCCCAGGGGAGAAGGTGCCAAACCAAGATTGTCATGTGTACTTTATCAGAGATCAT 699155
Query 41131 GTGACATGGGACTAGGGGTCCCGTTTAACATAGCGAGTTATGCTCTGCTCACGTATATGA 41190
|||| ||||| ||||| || || |||||||| ||| ||||| || || ||| | ||||
Sbjct 699156 GTGATATGGGTCTAGGAGTACCCTTTAACATCGCGTCGTATGCGCTACTGACGAAGATGA 699215
Query 41191 TTGCACACGTTACCAATTTAAAACCTGGTGAATTTGTTCACACGTTAGGAGATGGACATA 41250
|||| || || | |||||||||||||| ||||||| || || |||| |||
Sbjct 699216 TTGCTATGGTCTGTGATATGGAACCTGGTGAATTTATTCACACTTTGGGTGATGCGCATG 699275
Query 41251 TTTA 41254
||||
Sbjct 699276 TTTA 699279
>seq3
Length=1752996
Score = 93.3 bits (102), Expect = 3e-14
Identities = 238/359 (66%), Gaps = 10/359 (3%)
Strand=Plus/Minus
Query 19429 CCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATCGGAAGAAAAT 19488
||||| || || || |||||||||||||| | ||| || || || || || || ||
Sbjct 1252464 CCCAAGATCGTGAACGGTCCTGAAATCTTGAGTAAGTACGTTGGATCTTCAGAGGAGAAC 1252405
Query 19489 GTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAAAAACGTTTAGGGCGCAAAAGTTCT 19548
| || | || ||||| |||| ||| | || | |||| | || ||| ||
Sbjct 1252404 ATCCGGAACCTATTCAAAGACGCGGAAGCTGAATACAAG-GCAAAGGGAG-AAGAGTCCT 1252347
Query 19549 --TTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGGTTC----- 19601
|| || || || || | ||||| ||||| | | | || |||||||| ||
Sbjct 1252346 CGTTACATATAATCATTTTCGATGAGTTGGATTCTGTTTTCAAACAAAGAGGCTCAAGAG 1252287
Query 19602 -TGGTGTAAATGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGACGGTG 19660
|| || || ||| || ||| | ||||||||| ||| | || | || | || ||||
Sbjct 1252286 GTGATGGAACTGGCGTCGGTGATAATGTTGTCAACCAATTACTTGCCAAGATGGATGGTG 1252227
Query 19661 TTAACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGACTGGAATTAATAGACA 19720
| | ||| |||| ||||| ||||||||||| ||||| ||| | || || || || |
Sbjct 1252226 TCGATCAATTGAACAATATCTTAGTTATTGGTATGACCAATCGTAAAGATTTGATTGATA 1252167
Query 19721 GCGCCTTATTACGACCCGGTCGGTTGGAAATAAAGATCGAAATTAACTTACCCGATGAA 19779
||| ||| |||| || ||| | || ||| || | | |||||| | ||||| || |||
Sbjct 1252166 ACGCTTTACTACGTCCTGGTAGATTCGAAGTACAAGTTGAAATTCAATTACCGGACGAA 1252108
>seq2
Length=1319333
Score = 84.2 bits (92), Expect = 2e-11
Identities = 109/148 (74%), Gaps = 2/148 (1%)
Strand=Plus/Plus
Query 115034 GGTCATACGTGAAGGAAAAGCATGCGGATTAATAATCAAGTCTGGCACTAACCCGTCGGC 115093
||||||||| || |||| ||||| ||||| || || ||||| || || | || || ||
Sbjct 497887 GGTCATACGAGATGGAATGGCATGAGGATTGATTATTAAGTCCGGTACAACACCTTCAGC 497946
Query 115094 TGTGAACGGCATGTCGTGCTGATCG-TACATCATTCCACAAGTTCCTTTTTGAGCGGTAA 115152
|||||| ||||| || | ||| || || | || ||| ||| || |||||| || |
Sbjct 497947 TGTGAATGGCATATCTT-CTGTGCGGTATGTAATACCAATAGTACCCTTTTGACCGTGAC 498005
Query 115153 ACGATGCAAATTTATCACCAATCTCAGG 115180
||||||||||||||||| || | |||
Sbjct 498006 GGGATGCAAATTTATCACCGATTTGAGG 498033
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397455966092035
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |