Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20lactis_20[genbank_20GCA_5F002151565.1_202017-05-19] 7 sequences; 10,682,662 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq3 114 1e-20 >seq3 Length=1752996 Score = 114 bits (126), Expect = 1e-20 Identities = 350/537 (65%), Gaps = 3/537 (1%) Strand=Plus/Minus Query 19118 ATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTCCGCGAGACATACGAC 19177 ||| |||| || || || || || || |||| | ||||| ||||| ||| || Sbjct 677178 ATGAGAGTGGCTGTTGGTATTCACGGTAACGATATAGAACGAGTATTAGAGACTTACAAC 677119 Query 19178 CTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTCAACGCCGGTACGAAC 19237 || ||| || | | ||||| ||||| | || || | |||||||| ||||| Sbjct 677118 CTAATGTCTCAAAGATATTTCACCCACGCTTCTCCTACATTGTTCAACGCTGGTACTCCT 677059 Query 19238 AACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAGGGCATC 19297 | || || ||||| |||||| | || |||||||| || || ||| || || || Sbjct 677058 CATCCTCAAATGTCATCTTGTTTCTTGGTTGCTATGAAAGAGGATTCCATCGAAGGTATT 676999 Query 19298 TACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGGGGTATCGGGATCCAC 19357 ||||| || | ||||| || || ||||| ||| | || ||||| ||| | ||| Sbjct 676998 TACGATACCTTGAAGGAATGTGCTATGATCTCAAAGACTGCTGGTGGTATTGGGTTGCAC 676939 Query 19358 -TGCTCGAATATCCGGTCGAGTGGTACACGAATCAATGGGACGAACGGAGTAGCCGACGG 19416 | | | || ||||| || | |||| | || ||| || |||||| | | || Sbjct 676938 ATTCAC-AACATCCGTTCTACTGGTTCTTACATTGCTGGTACCAACGGAACTTCTAATGG 676880 Query 19417 TATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCAACCAGGGGGGCGG 19476 |||| | |||||| |||| |||||||||||||| || | ||||| |||| || || Sbjct 676879 TATCATTCCAATGATCCGTGTCTTCAACAACACTGCTCGTTACGTTGACCAAGGTGGTAA 676820 Query 19477 CAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGGACGTCATGGATTT 19536 ||| | || | ||||| | ||| | || |||||||| | || || | ||||| Sbjct 676819 CAAGAGACCAGGTGCCTTCGCTTTATACATTGAACCATGGCATTCTGATATCTTCGATTT 676760 Query 19537 CCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCGCGACCTCTTCACGGC 19596 | | || | | ||| || || | || || || || | | || | ||| | || Sbjct 676759 CATTGATATCAGGAAGAATCATGGAAAGGAAGAAATTCGTGCTAGAGATTTATTCCCTGC 676700 Query 19597 CTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACGAAGAATGGCACCT 19653 ||||||||||| || | |||||| ||| || || ||| || | || ||| |||| Sbjct 676699 ATTGTGGATTCCTGATTTGTTCATGAAGAGAGTGGAAAAGAACCAGGACTGG-ACCT 676644 Score = 87.8 bits (96), Expect = 2e-12 Identities = 145/209 (69%), Gaps = 8/209 (4%) Strand=Plus/Minus Query 20604 ATATCCCCCAGAACCTCAAGGACATTTACAGGACCGTATGGGAAATCCCACAGAAGAGCA 20663 ||||||| || | | |||||| | |||| ||| || |||||| | | || ||| | Sbjct 675665 ATATCCCACAAGAATTGAAGGACCTATACAAGACTGTTTGGGAATTGTCTCAAAAGCATA 675606 Query 20664 TCATCGACATGGCGGCCGATCGCGGCGCCTACATCGACCAGTCCCAGTCGCTCAATGTC- 20722 | ||||||||||||||||| || | || ||||| || || || || || | ||| || Sbjct 675605 TTATCGACATGGCGGCCGACCGTGCTGCTTACATTGATCAATCTCAATCCTTAAATATCC 675546 Query 20723 ---TTCATGGAGAATCCGAGCCTGGCGAAGCTGAGCTCCATGCATATGTACGGCTGGCAC 20779 ||| || | || | | ||| ||| | | ||||||||| | ||||| ||| | Sbjct 675545 ATATTCGTGCA----CCAACCATGGGTAAGTTAACTTCCATGCATTTCTACGGATGGAAA 675490 Query 20780 AAGGGGCTCAAGACGGGCATGTACTATCT 20808 ||||| | ||||| || |||||||| || Sbjct 675489 AAGGGTTTGAAGACTGGTATGTACTACCT 675461 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548524752004080