Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20lactis_20[genbank_20GCA_5F002151565.1_202017-05-19]
7 sequences; 10,682,662 total letters
Query= NC_028108.1
Length=171454
Score E
Sequences producing significant alignments: (Bits) Value
seq3 114 1e-20
>seq3
Length=1752996
Score = 114 bits (126), Expect = 1e-20
Identities = 350/537 (65%), Gaps = 3/537 (1%)
Strand=Plus/Minus
Query 19118 ATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTCCGCGAGACATACGAC 19177
||| |||| || || || || || || |||| | ||||| ||||| ||| ||
Sbjct 677178 ATGAGAGTGGCTGTTGGTATTCACGGTAACGATATAGAACGAGTATTAGAGACTTACAAC 677119
Query 19178 CTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTCAACGCCGGTACGAAC 19237
|| ||| || | | ||||| ||||| | || || | |||||||| |||||
Sbjct 677118 CTAATGTCTCAAAGATATTTCACCCACGCTTCTCCTACATTGTTCAACGCTGGTACTCCT 677059
Query 19238 AACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAGGGCATC 19297
| || || ||||| |||||| | || |||||||| || || ||| || || ||
Sbjct 677058 CATCCTCAAATGTCATCTTGTTTCTTGGTTGCTATGAAAGAGGATTCCATCGAAGGTATT 676999
Query 19298 TACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGGGGTATCGGGATCCAC 19357
||||| || | ||||| || || ||||| ||| | || ||||| ||| | |||
Sbjct 676998 TACGATACCTTGAAGGAATGTGCTATGATCTCAAAGACTGCTGGTGGTATTGGGTTGCAC 676939
Query 19358 -TGCTCGAATATCCGGTCGAGTGGTACACGAATCAATGGGACGAACGGAGTAGCCGACGG 19416
| | | || ||||| || | |||| | || ||| || |||||| | | ||
Sbjct 676938 ATTCAC-AACATCCGTTCTACTGGTTCTTACATTGCTGGTACCAACGGAACTTCTAATGG 676880
Query 19417 TATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCAACCAGGGGGGCGG 19476
|||| | |||||| |||| |||||||||||||| || | ||||| |||| || ||
Sbjct 676879 TATCATTCCAATGATCCGTGTCTTCAACAACACTGCTCGTTACGTTGACCAAGGTGGTAA 676820
Query 19477 CAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGGACGTCATGGATTT 19536
||| | || | ||||| | ||| | || |||||||| | || || | |||||
Sbjct 676819 CAAGAGACCAGGTGCCTTCGCTTTATACATTGAACCATGGCATTCTGATATCTTCGATTT 676760
Query 19537 CCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCGCGACCTCTTCACGGC 19596
| | || | | ||| || || | || || || || | | || | ||| | ||
Sbjct 676759 CATTGATATCAGGAAGAATCATGGAAAGGAAGAAATTCGTGCTAGAGATTTATTCCCTGC 676700
Query 19597 CTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACGAAGAATGGCACCT 19653
||||||||||| || | |||||| ||| || || ||| || | || ||| ||||
Sbjct 676699 ATTGTGGATTCCTGATTTGTTCATGAAGAGAGTGGAAAAGAACCAGGACTGG-ACCT 676644
Score = 87.8 bits (96), Expect = 2e-12
Identities = 145/209 (69%), Gaps = 8/209 (4%)
Strand=Plus/Minus
Query 20604 ATATCCCCCAGAACCTCAAGGACATTTACAGGACCGTATGGGAAATCCCACAGAAGAGCA 20663
||||||| || | | |||||| | |||| ||| || |||||| | | || ||| |
Sbjct 675665 ATATCCCACAAGAATTGAAGGACCTATACAAGACTGTTTGGGAATTGTCTCAAAAGCATA 675606
Query 20664 TCATCGACATGGCGGCCGATCGCGGCGCCTACATCGACCAGTCCCAGTCGCTCAATGTC- 20722
| ||||||||||||||||| || | || ||||| || || || || || | ||| ||
Sbjct 675605 TTATCGACATGGCGGCCGACCGTGCTGCTTACATTGATCAATCTCAATCCTTAAATATCC 675546
Query 20723 ---TTCATGGAGAATCCGAGCCTGGCGAAGCTGAGCTCCATGCATATGTACGGCTGGCAC 20779
||| || | || | | ||| ||| | | ||||||||| | ||||| ||| |
Sbjct 675545 ATATTCGTGCA----CCAACCATGGGTAAGTTAACTTCCATGCATTTCTACGGATGGAAA 675490
Query 20780 AAGGGGCTCAAGACGGGCATGTACTATCT 20808
||||| | ||||| || |||||||| ||
Sbjct 675489 AAGGGTTTGAAGACTGGTATGTACTACCT 675461
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 548524752004080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |