Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20lactis_20[genbank_20GCA_5F002151565.1_202017-05-19]
7 sequences; 10,682,662 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq5 170 4e-37
seq4 120 7e-22
seq1 118 2e-21
>seq5
Length=2217437
Score = 170 bits (188), Expect = 4e-37
Identities = 169/219 (77%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958
||| | |||||| || | |||||| || |||||||||||||| || | | ||| || ||
Sbjct 75883 TCTCAAGACAAGATGTAAAGTGGATTCCTTTTGGATGTTATAGTCAGACAAGGTTCTGCC 75942
Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018
|||||||| |||||| ||||| || || | | ||||||||| ||||| | ||||| ||
Sbjct 75943 ATCTTCCAACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAGGGATACCTTCTTT 76002
Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078
||| || ||||| ||||||||| |||||||||||||| |||||| || | ||||||
Sbjct 76003 GTCTTGAATCTTCGATTTCACGTTATCGATGGTGTCAGAAGATTCAACTTCCAAAGTGAT 76062
Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117
||||| || || | |||||| || || | ||||| ||
Sbjct 76063 AGTCTTACCAGTTAAAGTCTTAACGAAAATTTGCATGTT 76101
Score = 156 bits (172), Expect = 1e-32
Identities = 164/216 (76%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958
||| | |||||| || | |||||| || |||||||||||||| || | | ||| || ||
Sbjct 74971 TCTCAAGACAAGATGTAAAGTGGATTCCTTTTGGATGTTATAGTCAGACAAGGTTCTGCC 75030
Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018
|||||||| |||||| ||||| || || | | ||||||||| ||||||| ||||| ||
Sbjct 75031 ATCTTCCAACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAGGAATACCTTCTTT 75090
Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078
||| || ||||| || ||||| |||||||||||||| |||||| || | ||||||
Sbjct 75091 GTCTTGAATCTTAGACTTGACGTTATCGATGGTGTCAGAAGATTCAACTTCCAAAGTGAT 75150
Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| || || | || || || || | |||||
Sbjct 75151 GGTCTTACCGGTTAAGGTTTTGACGAAAATTTGCAT 75186
Score = 156 bits (172), Expect = 1e-32
Identities = 160/209 (77%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 210906 ACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCC 210965
||||| || | |||||| |||||||||||||| ||||| | | ||| ||||||||||||
Sbjct 75662 ACAAGATGCAAAGTGGATTCTTTTTGGATGTTGTAATCGGACAAGGTTCTTCCATCTTCC 75721
Query 210966 AGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGG 211025
| |||||| ||||| || || | | ||||||||| ||||| | ||||| ||||| ||
Sbjct 75722 AACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAGGGATACCTTCTTTGTCTTGA 75781
Query 211026 ATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTT 211085
||||| ||||||||| ||||||||||| || ||| || || | |||||| |||||
Sbjct 75782 ATCTTCGATTTCACGTTATCGATGGTGTCGGAAGATTCGACTTCCAAAGTGATGGTCTTA 75841
Query 211086 CCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || | || || || || | |||||
Sbjct 75842 CCAGTCAAGGTTTTGACGAAAATTTGCAT 75870
Score = 152 bits (168), Expect = 1e-31
Identities = 159/209 (76%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 210906 ACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCC 210965
||||| || | |||||| ||||||||||||||||| || | | ||| || |||||||||
Sbjct 75206 ACAAGATGCAAAGTGGATTCTTTTTGGATGTTATAGTCAGACAAGGTTCTGCCATCTTCC 75265
Query 210966 AGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGG 211025
| |||||| ||||| || || | | ||||||||| ||||| | ||||| ||||| ||
Sbjct 75266 AACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAGGGATACCTTCTTTGTCTTGA 75325
Query 211026 ATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTT 211085
||||| ||||||||| ||||||||||| || ||| || || | |||||| |||||
Sbjct 75326 ATCTTCGATTTCACGTTATCGATGGTGTCGGAAGATTCGACTTCCAAAGTGATGGTCTTA 75385
Query 211086 CCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || | || || || || | |||||
Sbjct 75386 CCAGTCAAGGTTTTGACGAAAATTTGCAT 75414
Score = 141 bits (156), Expect = 2e-28
Identities = 161/216 (75%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958
||| | |||||| || | |||||| || |||||||||||||| || | | ||| || |
Sbjct 75427 TCTCAAGACAAGATGTAAAGTGGATTCCTTTTGGATGTTATAGTCAGACAAGGTTCTGCT 75486
Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018
|||||||| |||||| ||||| || || | | ||||||||| ||||||| ||||| ||
Sbjct 75487 ATCTTCCAACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAGGAATACCTTCTTT 75546
Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078
||| || ||||| || ||||| ||||||||||| || ||| || || | ||||||
Sbjct 75547 GTCTTGAATCTTAGACTTGACGTTATCGATGGTGTCGGAAGATTCGACTTCCAAAGTGAT 75606
Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| || || | || || || || | |||||
Sbjct 75607 GGTCTTACCGGTTAAGGTTTTGACGAAAATTTGCAT 75642
>seq4
Length=1700866
Score = 120 bits (132), Expect = 7e-22
Identities = 156/216 (72%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958
||| | ||| | ||| | |||||| || ||||||||||| || || | | || || ||
Sbjct 1531085 TCTCAAGACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACC 1531026
Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018
|||||||| ||||| || || ||||| | | ||||||||| ||||||| ||||||||
Sbjct 1531025 ATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTT 1530966
Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078
||| |||||||| || || || || |||||||| || ||| || || | || ||
Sbjct 1530965 GTCTTGGATCTTAGACTTAACATTGTCAATGGTGTCGGAAGATTCGACTTCCAAGGTAAT 1530906
Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| || || | || || || || | |||||
Sbjct 1530905 GGTCTTACCTGTTAAGGTTTTGACGAAAATTTGCAT 1530870
>seq1
Length=1050866
Score = 118 bits (130), Expect = 2e-21
Identities = 143/195 (73%), Gaps = 0/195 (0%)
Strand=Plus/Minus
Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970
||| | |||||| || ||||||||||| || || | | ||| || |||||||||| ||
Sbjct 59837 GTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCATCTTCCAATTG 59778
Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030
||| || || ||||| | | ||||||||| || || | ||||||||||| || |||||
Sbjct 59777 CTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGGATACCTTCCTTGTCTTGAATCTT 59718
Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090
|| || || || |||||||| || ||| || || | |||||| ||||| || ||
Sbjct 59717 AGACTTGACATTGTCAATGGTGTCGGAAGATTCGACTTCCAAAGTGATGGTCTTACCAGT 59658
Query 211091 GAGAGTCTTTACAAA 211105
| ||||| || ||
Sbjct 59657 CAAGGTCTTGACGAA 59643
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159151896038555
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |