Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20lactis_20[genbank_20GCA_5F002151565.1_202017-05-19] 7 sequences; 10,682,662 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq5 104 5e-17 seq1 95.1 3e-14 seq6 93.3 1e-13 seq4 87.8 4e-12 >seq5 Length=2217437 Score = 104 bits (114), Expect = 5e-17 Identities = 158/224 (71%), Gaps = 1/224 (0%) Strand=Plus/Plus Query 151896 ACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCT 151955 |||||||| | ||| || |||||||||||||||||||||| || ||||| |||||||| Sbjct 75662 ACAAGATGCAAAGTGGATTCTTTTTGGATGTTGTAATCGGACAAGGTTCTTCCATCTTCC 75721 Query 151956 AGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGA 152015 | || || || || || | || || ||||| | | ||| ||||| || |||||| Sbjct 75722 AACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAGGGATACCTTCTTTGTCTTGA 75781 Query 152016 ATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTG 152075 || || ||| || | || | | |||| ||| || ||||| | ||| || || || Sbjct 75782 ATCTTCGATTTCACGTTATCGATGGTGTCGGAAGATTCGACTTCCAAAGTGATGGTCTTA 75841 Query 152076 CCCGTGAGAGTCTTCACGAAGACCTGCATTTTACC-CTTACTCT 152118 || || | || || ||||| | ||||| ||| |||| ||| Sbjct 75842 CCAGTCAAGGTTTTGACGAAAATTTGCATACCACCTCTTAATCT 75885 Score = 104 bits (114), Expect = 5e-17 Identities = 163/232 (70%), Gaps = 1/232 (0%) Strand=Plus/Plus Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948 ||| | ||||||||| | ||| || || ||||||||||| || || | || ||||| || Sbjct 75883 TCTCAAGACAAGATGTAAAGTGGATTCCTTTTGGATGTTATAGTCAGACAAGGTTCTGCC 75942 Query 151949 ATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTT 152008 |||||| | || || || || || | || || ||||| | | ||| ||||| || Sbjct 75943 ATCTTCCAACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAGGGATACCTTCTTT 76002 Query 152009 TTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAAT 152068 |||||||| || ||| || | || | | |||| ||| || ||||| | ||| || Sbjct 76003 GTCTTGAATCTTCGATTTCACGTTATCGATGGTGTCAGAAGATTCAACTTCCAAAGTGAT 76062 Query 152069 AGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT-TTTACCCTTACTCTA 152119 ||| || || || | |||||| ||||| | ||||| ||| | ||| |||| Sbjct 76063 AGTCTTACCAGTTAAAGTCTTAACGAAAATTTGCATGTTTTCTCTTGATCTA 76114 Score = 89.7 bits (98), Expect = 1e-12 Identities = 155/224 (69%), Gaps = 1/224 (0%) Strand=Plus/Plus Query 151896 ACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCT 151955 |||||||| | ||| || |||||||||||||| || || | || ||||| |||||||| Sbjct 75206 ACAAGATGCAAAGTGGATTCTTTTTGGATGTTATAGTCAGACAAGGTTCTGCCATCTTCC 75265 Query 151956 AGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGA 152015 | || || || || || | || || ||||| | | ||| ||||| || |||||| Sbjct 75266 AACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAGGGATACCTTCTTTGTCTTGA 75325 Query 152016 ATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTG 152075 || || ||| || | || | | |||| ||| || ||||| | ||| || || || Sbjct 75326 ATCTTCGATTTCACGTTATCGATGGTGTCGGAAGATTCGACTTCCAAAGTGATGGTCTTA 75385 Query 152076 CCCGTGAGAGTCTTCACGAAGACCTGCATTTTACC-CTTACTCT 152118 || || | || || ||||| | ||||| ||| |||| ||| Sbjct 75386 CCAGTCAAGGTTTTGACGAAAATTTGCATACCACCTCTTAATCT 75429 Score = 84.2 bits (92), Expect = 5e-11 Identities = 158/231 (68%), Gaps = 1/231 (0%) Strand=Plus/Plus Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948 ||| | ||||||||| | ||| || || ||||||||||| || || | || ||||| || Sbjct 74971 TCTCAAGACAAGATGTAAAGTGGATTCCTTTTGGATGTTATAGTCAGACAAGGTTCTGCC 75030 Query 151949 ATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTT 152008 |||||| | || || || || || | || || ||||| | | || ||||| || Sbjct 75031 ATCTTCCAACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAGGAATACCTTCTTT 75090 Query 152009 TTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAAT 152068 |||||||| || ||||| | || | | |||| ||| || ||||| | ||| || Sbjct 75091 GTCTTGAATCTTAGACTTGACGTTATCGATGGTGTCAGAAGATTCAACTTCCAAAGTGAT 75150 Query 152069 AGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTTACC-CTTACTCT 152118 || || || || | || || ||||| | ||||| ||| |||| ||| Sbjct 75151 GGTCTTACCGGTTAAGGTTTTGACGAAAATTTGCATACCACCTCTTAATCT 75201 >seq1 Length=1050866 Score = 95.1 bits (104), Expect = 3e-14 Identities = 141/199 (71%), Gaps = 1/199 (1%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || | ||| || || |||||||||||||| || | || ||||| |||||||| | Sbjct 59840 CAAG-TGCAAAGTGGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCATCTTCCA 59782 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 || || || ||||| | || || ||||| | | ||| |||||||| ||||||| Sbjct 59781 ATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGGATACCTTCCTTGTCTTGAA 59722 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || |||||| | || | | |||| ||| || ||||| | ||| || || || | Sbjct 59721 TCTTAGACTTGACATTGTCAATGGTGTCGGAAGATTCGACTTCCAAAGTGATGGTCTTAC 59662 Query 152077 CCGTGAGAGTCTTCACGAA 152095 | || | ||||| ||||| Sbjct 59661 CAGTCAAGGTCTTGACGAA 59643 >seq6 Length=2601250 Score = 93.3 bits (102), Expect = 1e-13 Identities = 119/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 115611 ATGAGGGCAAGGGAGATTTTCTATGCCATTTGGACATCTGATCTTTTTATGAAGCGAGTC 115670 ||||||||||| || | || |||||| | |||| | ||||||| ||||||||||| || Sbjct 110299 ATGAGGGCAAGAGATTTGTTTTATGCCCTCTGGATACCTGATCTCTTTATGAAGCGGGTT 110358 Query 115671 AAGGCAAACGGAATGTGGAGCCTCTTTTGTCCCAATGAAGCCCCTGGTCTTGATGATGTT 115730 || || | | ||| | |||| || ||||||| ||||| || |||| | Sbjct 110359 GAGAATAATGAAGACTGGTCAATTTTTTCCCCAGATGAAGCACCTGGGCTAACTGATTGT 110418 Query 115731 TATGGTCCAGAGTTTGAGAATCTTTACGAAAGGTACGAGAAAGA 115774 |||||| || ||||| || ||||| ||||| ||||||||||| Sbjct 110419 TATGGTGATGAATTTGATAAGCTTTATGAAAGATACGAGAAAGA 110462 >seq4 Length=1700866 Score = 87.8 bits (96), Expect = 4e-12 Identities = 145/208 (70%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || | ||| || || |||||||||||||| |||| |||||||| |||||||| | Sbjct 1531076 CAAG-TGCAAAGTGGATTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACCATCTTCCA 1531018 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 || || || ||||| | || || ||||| | | || |||||||| ||||| | Sbjct 1531017 ATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTTGTCTTGGA 1530958 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || || ||| | || | | |||| ||| || ||||| | ||||| || || | Sbjct 1530957 TCTTAGACTTAACATTGTCAATGGTGTCGGAAGATTCGACTTCCAAGGTAATGGTCTTAC 1530898 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || | || || ||||| | ||||| Sbjct 1530897 CTGTTAAGGTTTTGACGAAAATTTGCAT 1530870 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153820696516697