Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20lactis_20[genbank_20GCA_5F002151565.1_202017-05-19]
7 sequences; 10,682,662 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq5 104 5e-17
seq1 95.1 3e-14
seq6 93.3 1e-13
seq4 87.8 4e-12
>seq5
Length=2217437
Score = 104 bits (114), Expect = 5e-17
Identities = 158/224 (71%), Gaps = 1/224 (0%)
Strand=Plus/Plus
Query 151896 ACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCT 151955
|||||||| | ||| || |||||||||||||||||||||| || ||||| ||||||||
Sbjct 75662 ACAAGATGCAAAGTGGATTCTTTTTGGATGTTGTAATCGGACAAGGTTCTTCCATCTTCC 75721
Query 151956 AGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGA 152015
| || || || || || | || || ||||| | | ||| ||||| || ||||||
Sbjct 75722 AACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAGGGATACCTTCTTTGTCTTGA 75781
Query 152016 ATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTG 152075
|| || ||| || | || | | |||| ||| || ||||| | ||| || || ||
Sbjct 75782 ATCTTCGATTTCACGTTATCGATGGTGTCGGAAGATTCGACTTCCAAAGTGATGGTCTTA 75841
Query 152076 CCCGTGAGAGTCTTCACGAAGACCTGCATTTTACC-CTTACTCT 152118
|| || | || || ||||| | ||||| ||| |||| |||
Sbjct 75842 CCAGTCAAGGTTTTGACGAAAATTTGCATACCACCTCTTAATCT 75885
Score = 104 bits (114), Expect = 5e-17
Identities = 163/232 (70%), Gaps = 1/232 (0%)
Strand=Plus/Plus
Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948
||| | ||||||||| | ||| || || ||||||||||| || || | || ||||| ||
Sbjct 75883 TCTCAAGACAAGATGTAAAGTGGATTCCTTTTGGATGTTATAGTCAGACAAGGTTCTGCC 75942
Query 151949 ATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTT 152008
|||||| | || || || || || | || || ||||| | | ||| ||||| ||
Sbjct 75943 ATCTTCCAACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAGGGATACCTTCTTT 76002
Query 152009 TTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAAT 152068
|||||||| || ||| || | || | | |||| ||| || ||||| | ||| ||
Sbjct 76003 GTCTTGAATCTTCGATTTCACGTTATCGATGGTGTCAGAAGATTCAACTTCCAAAGTGAT 76062
Query 152069 AGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT-TTTACCCTTACTCTA 152119
||| || || || | |||||| ||||| | ||||| ||| | ||| ||||
Sbjct 76063 AGTCTTACCAGTTAAAGTCTTAACGAAAATTTGCATGTTTTCTCTTGATCTA 76114
Score = 89.7 bits (98), Expect = 1e-12
Identities = 155/224 (69%), Gaps = 1/224 (0%)
Strand=Plus/Plus
Query 151896 ACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCT 151955
|||||||| | ||| || |||||||||||||| || || | || ||||| ||||||||
Sbjct 75206 ACAAGATGCAAAGTGGATTCTTTTTGGATGTTATAGTCAGACAAGGTTCTGCCATCTTCC 75265
Query 151956 AGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGA 152015
| || || || || || | || || ||||| | | ||| ||||| || ||||||
Sbjct 75266 AACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAGGGATACCTTCTTTGTCTTGA 75325
Query 152016 ATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTG 152075
|| || ||| || | || | | |||| ||| || ||||| | ||| || || ||
Sbjct 75326 ATCTTCGATTTCACGTTATCGATGGTGTCGGAAGATTCGACTTCCAAAGTGATGGTCTTA 75385
Query 152076 CCCGTGAGAGTCTTCACGAAGACCTGCATTTTACC-CTTACTCT 152118
|| || | || || ||||| | ||||| ||| |||| |||
Sbjct 75386 CCAGTCAAGGTTTTGACGAAAATTTGCATACCACCTCTTAATCT 75429
Score = 84.2 bits (92), Expect = 5e-11
Identities = 158/231 (68%), Gaps = 1/231 (0%)
Strand=Plus/Plus
Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948
||| | ||||||||| | ||| || || ||||||||||| || || | || ||||| ||
Sbjct 74971 TCTCAAGACAAGATGTAAAGTGGATTCCTTTTGGATGTTATAGTCAGACAAGGTTCTGCC 75030
Query 151949 ATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTT 152008
|||||| | || || || || || | || || ||||| | | || ||||| ||
Sbjct 75031 ATCTTCCAACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAGGAATACCTTCTTT 75090
Query 152009 TTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAAT 152068
|||||||| || ||||| | || | | |||| ||| || ||||| | ||| ||
Sbjct 75091 GTCTTGAATCTTAGACTTGACGTTATCGATGGTGTCAGAAGATTCAACTTCCAAAGTGAT 75150
Query 152069 AGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTTACC-CTTACTCT 152118
|| || || || | || || ||||| | ||||| ||| |||| |||
Sbjct 75151 GGTCTTACCGGTTAAGGTTTTGACGAAAATTTGCATACCACCTCTTAATCT 75201
>seq1
Length=1050866
Score = 95.1 bits (104), Expect = 3e-14
Identities = 141/199 (71%), Gaps = 1/199 (1%)
Strand=Plus/Minus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| || | ||| || || |||||||||||||| || | || ||||| |||||||| |
Sbjct 59840 CAAG-TGCAAAGTGGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCATCTTCCA 59782
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
|| || || ||||| | || || ||||| | | ||| |||||||| |||||||
Sbjct 59781 ATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGGATACCTTCCTTGTCTTGAA 59722
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076
| || |||||| | || | | |||| ||| || ||||| | ||| || || || |
Sbjct 59721 TCTTAGACTTGACATTGTCAATGGTGTCGGAAGATTCGACTTCCAAAGTGATGGTCTTAC 59662
Query 152077 CCGTGAGAGTCTTCACGAA 152095
| || | ||||| |||||
Sbjct 59661 CAGTCAAGGTCTTGACGAA 59643
>seq6
Length=2601250
Score = 93.3 bits (102), Expect = 1e-13
Identities = 119/164 (73%), Gaps = 0/164 (0%)
Strand=Plus/Plus
Query 115611 ATGAGGGCAAGGGAGATTTTCTATGCCATTTGGACATCTGATCTTTTTATGAAGCGAGTC 115670
||||||||||| || | || |||||| | |||| | ||||||| ||||||||||| ||
Sbjct 110299 ATGAGGGCAAGAGATTTGTTTTATGCCCTCTGGATACCTGATCTCTTTATGAAGCGGGTT 110358
Query 115671 AAGGCAAACGGAATGTGGAGCCTCTTTTGTCCCAATGAAGCCCCTGGTCTTGATGATGTT 115730
|| || | | ||| | |||| || ||||||| ||||| || |||| |
Sbjct 110359 GAGAATAATGAAGACTGGTCAATTTTTTCCCCAGATGAAGCACCTGGGCTAACTGATTGT 110418
Query 115731 TATGGTCCAGAGTTTGAGAATCTTTACGAAAGGTACGAGAAAGA 115774
|||||| || ||||| || ||||| ||||| |||||||||||
Sbjct 110419 TATGGTGATGAATTTGATAAGCTTTATGAAAGATACGAGAAAGA 110462
>seq4
Length=1700866
Score = 87.8 bits (96), Expect = 4e-12
Identities = 145/208 (70%), Gaps = 1/208 (0%)
Strand=Plus/Minus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| || | ||| || || |||||||||||||| |||| |||||||| |||||||| |
Sbjct 1531076 CAAG-TGCAAAGTGGATTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACCATCTTCCA 1531018
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
|| || || ||||| | || || ||||| | | || |||||||| ||||| |
Sbjct 1531017 ATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTTGTCTTGGA 1530958
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076
| || || ||| | || | | |||| ||| || ||||| | ||||| || || |
Sbjct 1530957 TCTTAGACTTAACATTGTCAATGGTGTCGGAAGATTCGACTTCCAAGGTAATGGTCTTAC 1530898
Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104
| || | || || ||||| | |||||
Sbjct 1530897 CTGTTAAGGTTTTGACGAAAATTTGCAT 1530870
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153820696516697
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |