Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20lactis_20[genbank_20GCA_5F002151565.1_202017-05-19] 7 sequences; 10,682,662 total letters Query= NC_031761.1 Length=131855 Score E Sequences producing significant alignments: (Bits) Value seq4 98.7 8e-16 seq5 91.5 1e-13 >seq4 Length=1700866 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 ||||||||||| |||||||| || || || || ||||||||| ||||| ||| | | Sbjct 1530870 ATGCAAATTTTCGTCAAAACCTTAACAGGTAAGACCATTACCTTGGAAGTCGAATCTTCC 1530929 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219 || | ||| | | || || || || ||||| ||||| |||| || ||| Sbjct 1530930 GACACCATTGACAATGTTAAGTCTAAGATCCAAGACAAGGAAGGTATTCCTCCAGACCAA 1530989 Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279 ||||| | || | ||| || || |||||||||||| || |||| || |||| || || Sbjct 1530990 CAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTACAAC 1531049 Query 111280 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326 || ||||| ||||| || | || || || ||| | || | ||||| Sbjct 1531050 ATCCAAAAGGAATCCACTTTGCACTTGGTCTTGAGATTGAGAGGTGG 1531096 >seq5 Length=2217437 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 ||||||||||| |||||||| ||||| || || ||||| || ||||| ||| | | Sbjct 75870 ATGCAAATTTTCGTCAAAACCTTGACTGGTAAGACCATCACTTTGGAAGTCGAATCTTCC 75811 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219 || | | | | || ||| || ||| ||||||||||| | || || ||| Sbjct 75810 GACACCATCGATAACGTGAAATCGAAGATTCAAGACAAAGAAGGTATCCCTCCAGACCAA 75751 Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279 ||||| | |||| ||| || || || ||||||||| | ||| || ||||||| || Sbjct 75750 CAAAGATTAATTTTTGCAGGTAAGCAGTTGGAAGATGGAAGAACCTTGTCCGATTACAAC 75691 Query 111280 ATACAAAAAGAATCTACACTACATTTAGTGTTG 111312 || ||||||||||| || | ||| | || ||| Sbjct 75690 ATCCAAAAAGAATCCACTTTGCATCTTGTTTTG 75658 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 ||||||||||| |||||||| ||||| || || ||||| || ||||| ||| | | Sbjct 75414 ATGCAAATTTTCGTCAAAACCTTGACTGGTAAGACCATCACTTTGGAAGTCGAATCTTCC 75355 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219 || | | | | || ||| || ||| ||||||||||| | || || ||| Sbjct 75354 GACACCATCGATAACGTGAAATCGAAGATTCAAGACAAAGAAGGTATCCCTCCAGACCAA 75295 Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279 ||||| | |||| ||| || || || ||||||||| | ||| || | || ||||| Sbjct 75294 CAAAGATTAATTTTTGCAGGTAAGCAGTTGGAAGATGGCAGAACCTTGTCTGACTATAAC 75235 Query 111280 ATACAAAAAGAATCTACACTACATTTAGTGTTG 111312 || ||||||||||| || | ||| | || ||| Sbjct 75234 ATCCAAAAAGAATCCACTTTGCATCTTGTTTTG 75202 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421811164014232