Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20lactis_20[genbank_20GCA_5F002151565.1_202017-05-19] 7 sequences; 10,682,662 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq5 174 3e-38 seq1 158 3e-33 seq4 147 5e-30 seq3 86.0 1e-11 >seq5 Length=2217437 Score = 174 bits (192), Expect = 3e-38 Identities = 168/213 (79%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTC 282949 || |||||||| ||| ||| ||||||||||| ||||||| |||| || | |||||| || Sbjct 75890 ACAAGATGTAAAGTGGATTCCTTTTGGATGTTATAGTCAGACAAG-GTTCTGCCATCTTC 75948 Query 282950 TAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTG 283009 | || || || ||||| || || | ||||||||| || ||||| || |||||||| Sbjct 75949 CAACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAGGGATACCTTCTTTGTCTTG 76008 Query 283010 GATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTT 283069 ||||| | ||| ||| ||||||| ||||| |||| ||| ||||| | |||||| ||||| Sbjct 76009 AATCTTCGATTTCACGTTATCGATGGTGTCAGAAGATTCAACTTCCAAAGTGATAGTCTT 76068 Query 283070 ACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 ||| || |||||||||||||| || ||||| || Sbjct 76069 ACCAGTTAAAGTCTTAACGAAAATTTGCATGTT 76101 Score = 168 bits (186), Expect = 1e-36 Identities = 165/210 (79%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTC 282949 || ||||| || ||| ||||||||||||||| ||||||| |||| || | |||||| || Sbjct 75206 ACAAGATGCAAAGTGGATTCTTTTTGGATGTTATAGTCAGACAAG-GTTCTGCCATCTTC 75264 Query 282950 TAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTG 283009 | || || || ||||| || || | ||||||||| || ||||| || |||||||| Sbjct 75265 CAACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAGGGATACCTTCTTTGTCTTG 75324 Query 283010 GATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTT 283069 ||||| | ||| ||| ||||||| ||||| |||| ||||||||| | |||||| ||||| Sbjct 75325 AATCTTCGATTTCACGTTATCGATGGTGTCGGAAGATTCGACTTCCAAAGTGATGGTCTT 75384 Query 283070 ACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||| ||||| || || ||||| || ||||| Sbjct 75385 ACCAGTCAAGGTTTTGACGAAAATTTGCAT 75414 Score = 159 bits (176), Expect = 7e-34 Identities = 163/210 (78%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTC 282949 || |||||||| ||| ||| ||||||||||| ||||||| |||| || | |||||| || Sbjct 74978 ACAAGATGTAAAGTGGATTCCTTTTGGATGTTATAGTCAGACAAG-GTTCTGCCATCTTC 75036 Query 282950 TAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTG 283009 | || || || ||||| || || | ||||||||| |||||||| || |||||||| Sbjct 75037 CAACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAGGAATACCTTCTTTGTCTTG 75096 Query 283010 GATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTT 283069 ||||| | || ||| ||||||| ||||| |||| ||| ||||| | |||||| ||||| Sbjct 75097 AATCTTAGACTTGACGTTATCGATGGTGTCAGAAGATTCAACTTCCAAAGTGATGGTCTT 75156 Query 283070 ACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||| || || || || ||||| || ||||| Sbjct 75157 ACCGGTTAAGGTTTTGACGAAAATTTGCAT 75186 Score = 159 bits (176), Expect = 7e-34 Identities = 163/210 (78%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTC 282949 || |||||||| ||| ||| ||||||||||| ||||||| |||| || | || ||| || Sbjct 75434 ACAAGATGTAAAGTGGATTCCTTTTGGATGTTATAGTCAGACAAG-GTTCTGCTATCTTC 75492 Query 282950 TAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTG 283009 | || || || ||||| || || | ||||||||| |||||||| || |||||||| Sbjct 75493 CAACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAGGAATACCTTCTTTGTCTTG 75552 Query 283010 GATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTT 283069 ||||| | || ||| ||||||| ||||| |||| ||||||||| | |||||| ||||| Sbjct 75553 AATCTTAGACTTGACGTTATCGATGGTGTCGGAAGATTCGACTTCCAAAGTGATGGTCTT 75612 Query 283070 ACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||| || || || || ||||| || ||||| Sbjct 75613 ACCGGTTAAGGTTTTGACGAAAATTTGCAT 75642 Score = 159 bits (176), Expect = 7e-34 Identities = 163/210 (78%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTC 282949 || ||||| || ||| |||||||||||||||||| || | |||| || | ||||| || Sbjct 75662 ACAAGATGCAAAGTGGATTCTTTTTGGATGTTGTAATCGGACAAG-GTTCTTCCATCTTC 75720 Query 282950 TAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTG 283009 | || || || ||||| || || | ||||||||| || ||||| || |||||||| Sbjct 75721 CAACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAGGGATACCTTCTTTGTCTTG 75780 Query 283010 GATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTT 283069 ||||| | ||| ||| ||||||| ||||| |||| ||||||||| | |||||| ||||| Sbjct 75781 AATCTTCGATTTCACGTTATCGATGGTGTCGGAAGATTCGACTTCCAAAGTGATGGTCTT 75840 Query 283070 ACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||| ||||| || || ||||| || ||||| Sbjct 75841 ACCAGTCAAGGTTTTGACGAAAATTTGCAT 75870 >seq1 Length=1050866 Score = 158 bits (174), Expect = 3e-33 Identities = 157/201 (78%), Gaps = 2/201 (1%) Strand=Plus/Minus Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTC 282949 |||| || || ||| ||| ||||||||||||||||||| |||| || | ||||| || Sbjct 59842 ACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCAGACAAG-GTTCTACCATCTTC 59784 Query 282950 TAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTG 283009 | ||| || || ||||||||||| | ||||||||| || ||||| ||||||||||| Sbjct 59783 CAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGGATACCTTCCTTGTCTTG 59724 Query 283010 GATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTT 283069 ||||| | || || | || || ||||| |||| ||||||||| | |||||| ||||| Sbjct 59723 AATCTTAGACTTGACATTGTCAATGGTGTCGGAAGATTCGACTTCCAAAGTGATGGTCTT 59664 Query 283070 ACCCGTCAAAGTCTTAACGAA 283090 ||| ||||| ||||| ||||| Sbjct 59663 ACCAGTCAAGGTCTTGACGAA 59643 >seq4 Length=1700866 Score = 147 bits (162), Expect = 5e-30 Identities = 158/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950 |||| || || ||| ||| ||||||||||||||||| | | || | ||||| || Sbjct 1531078 ACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACCATCTTCC 1531019 Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010 | ||| || || ||||||||||| | ||||||||| |||||||| |||||||||||| Sbjct 1531018 AATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTTGTCTTGG 1530959 Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070 ||||| | || || | || || ||||| |||| ||||||||| | || || |||||| Sbjct 1530958 ATCTTAGACTTAACATTGTCAATGGTGTCGGAAGATTCGACTTCCAAGGTAATGGTCTTA 1530899 Query 283071 CCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || || || || ||||| || ||||| Sbjct 1530898 CCTGTTAAGGTTTTGACGAAAATTTGCAT 1530870 >seq3 Length=1752996 Score = 86.0 bits (94), Expect = 1e-11 Identities = 347/539 (64%), Gaps = 6/539 (1%) Strand=Plus/Minus Query 273526 TGTACCACGGCTTCATG-GCTACCATAGGTTCACCCTTCATCAGTCGCTCCACATTACCA 273584 ||||||| ||| ||| ||| |||| || ||||||||||| |||| ||||||| Sbjct 1168742 TGTACCATGGCGCCATCTGCT-CCATTTCCTCTCCCTTCATCAGACGCTTCACATTATTG 1168684 Query 273585 ATAATATCTTTAGGGTTGTAACTCGGAACGTTCGTAGACCAACCGGTGCCAATACCGGAA 273644 | |||||| | || ||| || |||| || ||| |||||| || |||||||| | Sbjct 1168683 ACAATATCCATTGGATTGAAAGGAGGAATATTAGTACTCCAACCCGTACCAATACCTTCA 1168624 Query 273645 GAACCATTCACCAGAATACTCGGGATAATTGGGACATAATATTCGGGCTCAATTTTATCA 273704 | |||||| || | || | || |||| || | ||| |||| || || | | | Sbjct 1168623 GTACCATTTACTAAAACCATTGGAATAACCGGTAAATACCATTCAGGTTCTACAGTCTGT 1168564 Query 273705 CCATCGTCGTAAAGGTACTTCAACAAAGCATCATCCGTATCAACGAAAACCTTTCGCGTC 273764 |||| || | || || ||||| || | ||| || | | ||||| |||| ||| Sbjct 1168563 TCATCATCTTGAATATAATTCAATAATGGATCGTCGAGAGTATTGAAAATTTTTCTCGTA 1168504 Query 273765 TGAGGATTCAGTTTCGTGAAAATGTA-CCTGGCACTCGCATGGTCCTTGCCACCTTGCAG 273823 | || || | |||||| || || | |||| | ||| || || ||||| || | Sbjct 1168503 AGTTTGTTTAGCTCCGTGAAGATATATCTTGGCGC-AGCAGAATCTTTACCACC-TGTTG 1168446 Query 273824 C-CTCGAACCAAACTGACCCTCGGGCAGTAGCCAGTTTATGTTGTTGCTACCGACGTAAT 273882 | || | ||| || ||| | || | | ||| || || ||| ||| || ||| Sbjct 1168445 CTCTTGTACCGAAGGCACCATTTGGTTTCAACAAGTAAATATTATTGGAACCAACAAAAT 1168386 Query 273883 CCTGAGCCATATTCACGATAGTCCCCTGAAGGGATACCTCGCCGTGGTGATAGGCGCTGT 273942 ||||||| | | || ||||| | | ||| || || || ||||| | | | Sbjct 1168385 CCTGAGCTAGACCGACAATAGTTTGATACAAAGATTGTTCACCATGATGATACCCTGTAT 1168326 Query 273943 GTTCGGCGATATAACCACTGAACTGAGCAACCTTCACATCGCTCGTCAAGTTTCGCTTGA 274002 |||| | | |||||||| || ||||| ||||| | || || |||| || || |||| Sbjct 1168325 GTTCTGAAACATAACCACCTAATTGAGCGACCTTGATTTCACTTTTCAAATTACGTTTGA 1168266 Query 274003 ATGCGGAATACAACACCTTCCGCTGCGAGGGCTTGAACCCATCAACGACCGATGGAATA 274061 | || ||| | || |||| ||| || || || ||||| | || || |||||| Sbjct 1168265 AGCAGGCATAGATAACTTTCCTCTGACCAGGTTTCAAACCATCTAAAACAGAGGGAATA 1168207 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046739106120578