Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20lactis_20[genbank_20GCA_5F002151565.1_202017-05-19]
7 sequences; 10,682,662 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq5 174 3e-38
seq1 158 3e-33
seq4 147 5e-30
seq3 86.0 1e-11
>seq5
Length=2217437
Score = 174 bits (192), Expect = 3e-38
Identities = 168/213 (79%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTC 282949
|| |||||||| ||| ||| ||||||||||| ||||||| |||| || | |||||| ||
Sbjct 75890 ACAAGATGTAAAGTGGATTCCTTTTGGATGTTATAGTCAGACAAG-GTTCTGCCATCTTC 75948
Query 282950 TAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTG 283009
| || || || ||||| || || | ||||||||| || ||||| || ||||||||
Sbjct 75949 CAACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAGGGATACCTTCTTTGTCTTG 76008
Query 283010 GATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTT 283069
||||| | ||| ||| ||||||| ||||| |||| ||| ||||| | |||||| |||||
Sbjct 76009 AATCTTCGATTTCACGTTATCGATGGTGTCAGAAGATTCAACTTCCAAAGTGATAGTCTT 76068
Query 283070 ACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102
||| || |||||||||||||| || ||||| ||
Sbjct 76069 ACCAGTTAAAGTCTTAACGAAAATTTGCATGTT 76101
Score = 168 bits (186), Expect = 1e-36
Identities = 165/210 (79%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTC 282949
|| ||||| || ||| ||||||||||||||| ||||||| |||| || | |||||| ||
Sbjct 75206 ACAAGATGCAAAGTGGATTCTTTTTGGATGTTATAGTCAGACAAG-GTTCTGCCATCTTC 75264
Query 282950 TAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTG 283009
| || || || ||||| || || | ||||||||| || ||||| || ||||||||
Sbjct 75265 CAACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAGGGATACCTTCTTTGTCTTG 75324
Query 283010 GATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTT 283069
||||| | ||| ||| ||||||| ||||| |||| ||||||||| | |||||| |||||
Sbjct 75325 AATCTTCGATTTCACGTTATCGATGGTGTCGGAAGATTCGACTTCCAAAGTGATGGTCTT 75384
Query 283070 ACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||| ||||| || || ||||| || |||||
Sbjct 75385 ACCAGTCAAGGTTTTGACGAAAATTTGCAT 75414
Score = 159 bits (176), Expect = 7e-34
Identities = 163/210 (78%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTC 282949
|| |||||||| ||| ||| ||||||||||| ||||||| |||| || | |||||| ||
Sbjct 74978 ACAAGATGTAAAGTGGATTCCTTTTGGATGTTATAGTCAGACAAG-GTTCTGCCATCTTC 75036
Query 282950 TAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTG 283009
| || || || ||||| || || | ||||||||| |||||||| || ||||||||
Sbjct 75037 CAACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAGGAATACCTTCTTTGTCTTG 75096
Query 283010 GATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTT 283069
||||| | || ||| ||||||| ||||| |||| ||| ||||| | |||||| |||||
Sbjct 75097 AATCTTAGACTTGACGTTATCGATGGTGTCAGAAGATTCAACTTCCAAAGTGATGGTCTT 75156
Query 283070 ACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||| || || || || ||||| || |||||
Sbjct 75157 ACCGGTTAAGGTTTTGACGAAAATTTGCAT 75186
Score = 159 bits (176), Expect = 7e-34
Identities = 163/210 (78%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTC 282949
|| |||||||| ||| ||| ||||||||||| ||||||| |||| || | || ||| ||
Sbjct 75434 ACAAGATGTAAAGTGGATTCCTTTTGGATGTTATAGTCAGACAAG-GTTCTGCTATCTTC 75492
Query 282950 TAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTG 283009
| || || || ||||| || || | ||||||||| |||||||| || ||||||||
Sbjct 75493 CAACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAGGAATACCTTCTTTGTCTTG 75552
Query 283010 GATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTT 283069
||||| | || ||| ||||||| ||||| |||| ||||||||| | |||||| |||||
Sbjct 75553 AATCTTAGACTTGACGTTATCGATGGTGTCGGAAGATTCGACTTCCAAAGTGATGGTCTT 75612
Query 283070 ACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||| || || || || ||||| || |||||
Sbjct 75613 ACCGGTTAAGGTTTTGACGAAAATTTGCAT 75642
Score = 159 bits (176), Expect = 7e-34
Identities = 163/210 (78%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTC 282949
|| ||||| || ||| |||||||||||||||||| || | |||| || | ||||| ||
Sbjct 75662 ACAAGATGCAAAGTGGATTCTTTTTGGATGTTGTAATCGGACAAG-GTTCTTCCATCTTC 75720
Query 282950 TAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTG 283009
| || || || ||||| || || | ||||||||| || ||||| || ||||||||
Sbjct 75721 CAACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAGGGATACCTTCTTTGTCTTG 75780
Query 283010 GATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTT 283069
||||| | ||| ||| ||||||| ||||| |||| ||||||||| | |||||| |||||
Sbjct 75781 AATCTTCGATTTCACGTTATCGATGGTGTCGGAAGATTCGACTTCCAAAGTGATGGTCTT 75840
Query 283070 ACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||| ||||| || || ||||| || |||||
Sbjct 75841 ACCAGTCAAGGTTTTGACGAAAATTTGCAT 75870
>seq1
Length=1050866
Score = 158 bits (174), Expect = 3e-33
Identities = 157/201 (78%), Gaps = 2/201 (1%)
Strand=Plus/Minus
Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTC 282949
|||| || || ||| ||| ||||||||||||||||||| |||| || | ||||| ||
Sbjct 59842 ACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCAGACAAG-GTTCTACCATCTTC 59784
Query 282950 TAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTG 283009
| ||| || || ||||||||||| | ||||||||| || ||||| |||||||||||
Sbjct 59783 CAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGGATACCTTCCTTGTCTTG 59724
Query 283010 GATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTT 283069
||||| | || || | || || ||||| |||| ||||||||| | |||||| |||||
Sbjct 59723 AATCTTAGACTTGACATTGTCAATGGTGTCGGAAGATTCGACTTCCAAAGTGATGGTCTT 59664
Query 283070 ACCCGTCAAAGTCTTAACGAA 283090
||| ||||| ||||| |||||
Sbjct 59663 ACCAGTCAAGGTCTTGACGAA 59643
>seq4
Length=1700866
Score = 147 bits (162), Expect = 5e-30
Identities = 158/209 (76%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950
|||| || || ||| ||| ||||||||||||||||| | | || | ||||| ||
Sbjct 1531078 ACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACCATCTTCC 1531019
Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010
| ||| || || ||||||||||| | ||||||||| |||||||| ||||||||||||
Sbjct 1531018 AATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTTGTCTTGG 1530959
Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070
||||| | || || | || || ||||| |||| ||||||||| | || || ||||||
Sbjct 1530958 ATCTTAGACTTAACATTGTCAATGGTGTCGGAAGATTCGACTTCCAAGGTAATGGTCTTA 1530899
Query 283071 CCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| || || || || ||||| || |||||
Sbjct 1530898 CCTGTTAAGGTTTTGACGAAAATTTGCAT 1530870
>seq3
Length=1752996
Score = 86.0 bits (94), Expect = 1e-11
Identities = 347/539 (64%), Gaps = 6/539 (1%)
Strand=Plus/Minus
Query 273526 TGTACCACGGCTTCATG-GCTACCATAGGTTCACCCTTCATCAGTCGCTCCACATTACCA 273584
||||||| ||| ||| ||| |||| || ||||||||||| |||| |||||||
Sbjct 1168742 TGTACCATGGCGCCATCTGCT-CCATTTCCTCTCCCTTCATCAGACGCTTCACATTATTG 1168684
Query 273585 ATAATATCTTTAGGGTTGTAACTCGGAACGTTCGTAGACCAACCGGTGCCAATACCGGAA 273644
| |||||| | || ||| || |||| || ||| |||||| || |||||||| |
Sbjct 1168683 ACAATATCCATTGGATTGAAAGGAGGAATATTAGTACTCCAACCCGTACCAATACCTTCA 1168624
Query 273645 GAACCATTCACCAGAATACTCGGGATAATTGGGACATAATATTCGGGCTCAATTTTATCA 273704
| |||||| || | || | || |||| || | ||| |||| || || | | |
Sbjct 1168623 GTACCATTTACTAAAACCATTGGAATAACCGGTAAATACCATTCAGGTTCTACAGTCTGT 1168564
Query 273705 CCATCGTCGTAAAGGTACTTCAACAAAGCATCATCCGTATCAACGAAAACCTTTCGCGTC 273764
|||| || | || || ||||| || | ||| || | | ||||| |||| |||
Sbjct 1168563 TCATCATCTTGAATATAATTCAATAATGGATCGTCGAGAGTATTGAAAATTTTTCTCGTA 1168504
Query 273765 TGAGGATTCAGTTTCGTGAAAATGTA-CCTGGCACTCGCATGGTCCTTGCCACCTTGCAG 273823
| || || | |||||| || || | |||| | ||| || || ||||| || |
Sbjct 1168503 AGTTTGTTTAGCTCCGTGAAGATATATCTTGGCGC-AGCAGAATCTTTACCACC-TGTTG 1168446
Query 273824 C-CTCGAACCAAACTGACCCTCGGGCAGTAGCCAGTTTATGTTGTTGCTACCGACGTAAT 273882
| || | ||| || ||| | || | | ||| || || ||| ||| || |||
Sbjct 1168445 CTCTTGTACCGAAGGCACCATTTGGTTTCAACAAGTAAATATTATTGGAACCAACAAAAT 1168386
Query 273883 CCTGAGCCATATTCACGATAGTCCCCTGAAGGGATACCTCGCCGTGGTGATAGGCGCTGT 273942
||||||| | | || ||||| | | ||| || || || ||||| | | |
Sbjct 1168385 CCTGAGCTAGACCGACAATAGTTTGATACAAAGATTGTTCACCATGATGATACCCTGTAT 1168326
Query 273943 GTTCGGCGATATAACCACTGAACTGAGCAACCTTCACATCGCTCGTCAAGTTTCGCTTGA 274002
|||| | | |||||||| || ||||| ||||| | || || |||| || || ||||
Sbjct 1168325 GTTCTGAAACATAACCACCTAATTGAGCGACCTTGATTTCACTTTTCAAATTACGTTTGA 1168266
Query 274003 ATGCGGAATACAACACCTTCCGCTGCGAGGGCTTGAACCCATCAACGACCGATGGAATA 274061
| || ||| | || |||| ||| || || || ||||| | || || ||||||
Sbjct 1168265 AGCAGGCATAGATAACTTTCCTCTGACCAGGTTTCAAACCATCTAAAACAGAGGGAATA 1168207
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046739106120578
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |