Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20lactis_20[genbank_20GCA_5F002151565.1_202017-05-19] 7 sequences; 10,682,662 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq6 178 1e-39 >seq6 Length=2601250 Score = 178 bits (196), Expect = 1e-39 Identities = 547/839 (65%), Gaps = 19/839 (2%) Strand=Plus/Minus Query 23240 TTTCGAAAAAATTTGTCTTACCCTCTAATGATATATTTTCCATAAAATCAAATGGATTAG 23299 |||||||||| || |||||||| | || || ||||||||||| ||||| ||||| || | Sbjct 1394628 TTTCGAAAAAGTTGGTCTTACCAGCCAAGGAGATATTTTCCATGAAATCGAATGGGTTGG 1394569 Query 23300 AAGTATT-ATATACAGCTT--TACATGATAATTCCTTTAAAAGCCTATCTGCTACAAATT 23356 ||| | ||| ||| ||| | || ||| || || || ||||||| Sbjct 1394568 TGACATTGAAATATTTCTTGTTACCCAAGGCGACCAATAAT---CTGTCGGCGACAAATT 1394512 Query 23357 CAATATATTGACACATCAAATCATAGTTTATACCTATTAGTTTTACTGGAATCGCATCAT 23416 | | ||||| ||| || || ||| ||||| | ||| || || | ||||| Sbjct 1394511 CCACGTATTGGTTCATTAAGTCTGCGTTCATACCCAATAGAGAAACGGGTAGAGCATCCA 1394452 Query 23417 ATAAGAATAGTTTTTCAATGGAAACAGCATCTTTAATTATTTGAACAATAACTTCTTCAC 23476 ||| || |||||||| ||||| ||| |||| || | | | || |||| | Sbjct 1394451 TGAAGTATCTCTTTTCAATTTCGACAGCTTCTGTAATGATCTTTTCCACAATTTCTGGAT 1394392 Query 23477 TAGGTGGATATTTTAAATACTTAAACAATAAACATGCAAAATCACAATGTAGGCCTTCAT 23536 | ||| || || |||| ||| | || ||| ||||| || |||||| ||||||| Sbjct 1394391 TTGGTTTATTCTTCAAATGGGCAAAGAGTAGACAGGCAAAGTCTGTATGTAGACCTTCAT 1394332 Query 23537 CCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTAATCC 23596 | |||| ||||| || ||||| || || || || |||||||| || || || | || Sbjct 1394331 CTCTACAGATCAACTCGTTAGAGAAAGTCAAACCAGGCATTAACCCCTTCTTCTTCAACC 1394272 Query 23597 AAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCCACAA 23656 | || || |||||||| || ||||| ||||| | ||| || ||||| || || || || | Sbjct 1394271 AGAAGATAGCAGCAAAGGAACCGGAGAAGAACACACCTTCCACAGCAGCGAAAGCAACCA 1394212 Query 23657 GACGTGTACCAAATGTTGCATTATAATCAGAAATCCAtttttttGTCCAATTAGCCTTCA 23716 | | |||||| |||| || ||| ||||||| | | | ||| | |||||| Sbjct 1394211 ATCTTTCACCAAACAAGGCATCATCATCTTGAATCCATCTGATAGCCCATTCAGCCTTTT 1394152 Query 23717 ATTTTACACACTCAATTGTTTCAATTGCTTTTAAGAGAAAAGTTTTTTCTTCATTATCTG 23776 ||| | || ||||| || || || || | ||| |||| | ||| Sbjct 1394151 CTTTAATTTGTGGGATAGTTTCGATAGCATTGAACAAAAACTCACTTTCCTTTGGATCCT 1394092 Query 23777 TTATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATATTTTCAATAGCAATCT 23836 | ||||| |||||||| | || ||| | || ||||| ||||| || || ||| | Sbjct 1394091 TAATATAGGTATCAATCAACAAGGAATAAGTCTCTGAATGGATATTCTCCATCATAATTT 1394032 Query 23837 GAAACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATTAAAAAATCTTTTAGCTA 23896 | |||||||| |||||| | ||||| | ||| || ||| | || | | | | Sbjct 1394031 GGAACCCATAGAAACATTTCGCTTCTGGTGCTTGCACTTCAGCTGAGAAGTTCTCCACCA 1393972 Query 23897 AATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAACATATTTT----ATA 23952 | ||||||||||| |||||||| ||||| ||||| || | | ||| | ||| Sbjct 1393971 AGTTTTCGTTAACGATACCATCCGAGGCAGCGAAGAACGCCA----AAATTCTAGAGATA 1393916 Query 23953 AAATGTCTTTC---ATCAGTTGATAAT-TTTTTCCAATCATTAATATCTTTTGATAAATC 24008 ||| ||||| ||| || || | || |||||||| | | ||| || || ||||| Sbjct 1393915 AAAAACCTTTCGTTCTCA-TTCATTCTGTTGTTCCAATCGTGCAAATCCTTGGACAAATC 1393857 Query 24009 AACTTCATCAACTGTCCAAAAACTTGCCAAGGCACGCTTATACATTAGCCAAATATCAT 24067 | ||| || | ||||| ||| || ||| | |||||| | |||||| |||| Sbjct 1393856 GATTTCTTCTGCAGTCCAGAAAGACGCTTCGGCCCTCTTATATGCTTCCCAAATCTCAT 1393798 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521487954369800