Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20lactis_20[genbank_20GCA_5F002151565.1_202017-05-19] 7 sequences; 10,682,662 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq4 129 4e-25 seq5 111 1e-19 seq1 107 1e-18 >seq4 Length=1700866 Score = 129 bits (142), Expect = 4e-25 Identities = 170/232 (73%), Gaps = 8/232 (3%) Strand=Plus/Minus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || ||||||| |||||| |||| ||| | ||| ||||||||||||||||| |||| Sbjct 1531096 CCACCTCTCAATCTCAAGACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCGGAC 1531037 Query 44171 A--GTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAG 44228 | ||| | | || |||| ||||| || ||||||||||| | || || |||| || Sbjct 1531036 AAAGTT--CTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGAG 1530979 Query 44229 GCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTC 44286 | | ||||||||| || ||||| ||| || ||| | |||||||||| ||||| Sbjct 1530978 GAATACCTTCCTTGTCTTGGATCTTAGACTTAACATTGT--CAATGGTGTCGGAAGATTC 1530921 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 || |||| ||||| ||||| || || | ||| || ||||| ||||||||| Sbjct 1530920 GACTTCCAAGGTAATGGTCTTACCTGTTAAGGTTTTGACGAAAATTTGCATG 1530869 >seq5 Length=2217437 Score = 111 bits (122), Expect = 1e-19 Identities = 167/235 (71%), Gaps = 2/235 (1%) Strand=Plus/Plus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || ||||| | |||||| || || || | ||| || |||||||||||||| Sbjct 75637 TTGCATACCACCTCTTAATCTCAAAACAAGATGCAAAGTGGATTCTTTTTGGATGTTGTA 75696 Query 44164 ATCGG-CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGAT 44222 ||||| | || | | | || |||| |||||| || ||||| || || | || || | Sbjct 75697 ATCGGACAAGGT-TCTTCCATCTTCCAACTGCTTACCTGCAAAAATTAATCTTTGTTGGT 75755 Query 44223 CTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGG 44282 ||| ||| | |||||| || || |||||| |||| | | |||||||||| | Sbjct 75756 CTGGAGGGATACCTTCTTTGTCTTGAATCTTCGATTTCACGTTATCGATGGTGTCGGAAG 75815 Query 44283 ATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||| || |||| || || ||||| || || | ||| || ||||| |||||||| Sbjct 75816 ATTCGACTTCCAAAGTGATGGTCTTACCAGTCAAGGTTTTGACGAAAATTTGCAT 75870 Score = 104 bits (114), Expect = 2e-17 Identities = 166/236 (70%), Gaps = 2/236 (1%) Strand=Plus/Plus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || ||||| | |||||| || || || | ||| |||||||||||||| || Sbjct 75865 TTGCATACCACCTCTTAATCTCAAGACAAGATGTAAAGTGGATTCCTTTTGGATGTTATA 75924 Query 44164 ATC-GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGAT 44222 || | | || | || | || |||| |||||| || ||||| || || | || || | Sbjct 75925 GTCAGACAAGGTTCTGC-CATCTTCCAACTGCTTACCTGCAAAAATTAATCTTTGTTGGT 75983 Query 44223 CTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGG 44282 ||| ||| | |||||| || || |||||| |||| | | |||||||| | | Sbjct 75984 CTGGAGGGATACCTTCTTTGTCTTGAATCTTCGATTTCACGTTATCGATGGTGTCAGAAG 76043 Query 44283 ATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 |||| || |||| || || ||||| || || | ||||| ||||| ||||||||| Sbjct 76044 ATTCAACTTCCAAAGTGATAGTCTTACCAGTTAAAGTCTTAACGAAAATTTGCATG 76099 Score = 102 bits (112), Expect = 6e-17 Identities = 165/235 (70%), Gaps = 2/235 (1%) Strand=Plus/Plus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || ||||| | |||||| || || || | ||| || ||||||||||| || Sbjct 75181 TTGCATACCACCTCTTAATCTCAAAACAAGATGCAAAGTGGATTCTTTTTGGATGTTATA 75240 Query 44164 ATC-GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGAT 44222 || | | || | || | || |||| |||||| || ||||| || || | || || | Sbjct 75241 GTCAGACAAGGTTCTGC-CATCTTCCAACTGCTTACCTGCAAAAATTAATCTTTGTTGGT 75299 Query 44223 CTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGG 44282 ||| ||| | |||||| || || |||||| |||| | | |||||||||| | Sbjct 75300 CTGGAGGGATACCTTCTTTGTCTTGAATCTTCGATTTCACGTTATCGATGGTGTCGGAAG 75359 Query 44283 ATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||| || |||| || || ||||| || || | ||| || ||||| |||||||| Sbjct 75360 ATTCGACTTCCAAAGTGATGGTCTTACCAGTCAAGGTTTTGACGAAAATTTGCAT 75414 Score = 102 bits (112), Expect = 6e-17 Identities = 165/235 (70%), Gaps = 2/235 (1%) Strand=Plus/Plus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || ||||| | |||||| || || || | ||| |||||||||||||| || Sbjct 75409 TTGCATACCACCTCTTAATCTCAAGACAAGATGTAAAGTGGATTCCTTTTGGATGTTATA 75468 Query 44164 ATC-GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGAT 44222 || | | || | ||| || |||| |||||| || ||||| || || | || || | Sbjct 75469 GTCAGACAAGGTTCTGCT-ATCTTCCAACTGCTTACCTGCAAAAATTAATCTTTGTTGGT 75527 Query 44223 CTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGG 44282 ||| ||| | |||||| || || ||||| ||| | | | |||||||||| | Sbjct 75528 CTGGAGGAATACCTTCTTTGTCTTGAATCTTAGACTTGACGTTATCGATGGTGTCGGAAG 75587 Query 44283 ATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||| || |||| || || ||||| || || | ||| || ||||| |||||||| Sbjct 75588 ATTCGACTTCCAAAGTGATGGTCTTACCGGTTAAGGTTTTGACGAAAATTTGCAT 75642 Score = 95.1 bits (104), Expect = 9e-15 Identities = 161/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 44108 ATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC- 44166 || || ||||| | |||||| || || || | ||| |||||||||||||| || || Sbjct 74957 ATGCCACCTCTTAATCTCAAGACAAGATGTAAAGTGGATTCCTTTTGGATGTTATAGTCA 75016 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | | || | || | || |||| |||||| || ||||| || || | || || |||| Sbjct 75017 GACAAGGTTCTGC-CATCTTCCAACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGG 75075 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 ||| | |||||| || || ||||| ||| | | | |||||||| | ||||| Sbjct 75076 AGGAATACCTTCTTTGTCTTGAATCTTAGACTTGACGTTATCGATGGTGTCAGAAGATTC 75135 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || |||| || || ||||| || || | ||| || ||||| |||||||| Sbjct 75136 AACTTCCAAAGTGATGGTCTTACCGGTTAAGGTTTTGACGAAAATTTGCAT 75186 >seq1 Length=1050866 Score = 107 bits (118), Expect = 1e-18 Identities = 161/224 (72%), Gaps = 6/224 (3%) Strand=Plus/Minus Query 44108 ATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCG 44167 || || ||||||| |||||| |||| ||| | ||| ||||||||||||||||| || Sbjct 59863 ATACCACCTCTCAATCTCAAAACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCA 59804 Query 44168 G-CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | | || | | | || |||| ||||| || ||||||||||| | || || |||| Sbjct 59803 GACAAGGTTCTAC-CATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGG 59745 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGAT 44284 || | ||||||||| || ||||| ||| || ||| | |||||||||| ||| Sbjct 59744 TGGGATACCTTCCTTGTCTTGAATCTTAGACTTGACATTGT--CAATGGTGTCGGAAGAT 59687 Query 44285 TCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAA 44328 || || |||| || || ||||| || || | |||||| ||||| Sbjct 59686 TCGACTTCCAAAGTGATGGTCTTACCAGTCAAGGTCTTGACGAA 59643 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359990369288319