Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20lactis_20[genbank_20GCA_5F002151565.1_202017-05-19] 7 sequences; 10,682,662 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq5 183 7e-41 seq4 129 1e-24 >seq5 Length=2217437 Score = 183 bits (202), Expect = 7e-41 Identities = 174/220 (79%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||||||||| ||||| | || || || || ||||| | || || ||| || ||| Sbjct 75867 CAAATTTTCGTCAAAACCTTGACTGGTAAGACCATCACTTTGGAAGTCGAATCTTCCGAC 75808 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| ||||| ||| |||||||| ||||||||||| |||||||| ||||| ||| Sbjct 75807 ACCATCGATAACGTGAAATCGAAGATTCAAGACAAAGAAGGTATCCCTCCAGACCAACAA 75748 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102 || | || || || || || ||| | ||||||||||| || |||| ||||||| ||| | Sbjct 75747 AGATTAATTTTTGCAGGTAAGCAGTTGGAAGATGGAAGAAC-CTTGTCCGATTACAACAT 75689 Query 178103 CCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 |||||||||||| || ||||||||||||||||| | ||| Sbjct 75688 CCAAAAAGAATCCACTTTGCATCTTGTTTTGAGATTAAGA 75649 Score = 174 bits (192), Expect = 4e-38 Identities = 172/220 (78%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||||||||| ||||| | || || || || ||||| | || || ||| || ||| Sbjct 75411 CAAATTTTCGTCAAAACCTTGACTGGTAAGACCATCACTTTGGAAGTCGAATCTTCCGAC 75352 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| ||||| ||| |||||||| ||||||||||| |||||||| ||||| ||| Sbjct 75351 ACCATCGATAACGTGAAATCGAAGATTCAAGACAAAGAAGGTATCCCTCCAGACCAACAA 75292 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCC-GATTATAACGT 178102 || | || || || || || ||| | |||||||| || || |||| | || |||||| | Sbjct 75291 AGATTAATTTTTGCAGGTAAGCAGTTGGAAGATGGCAGAAC-CTTGTCTGACTATAACAT 75233 Query 178103 CCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 |||||||||||| || ||||||||||||||||| | ||| Sbjct 75232 CCAAAAAGAATCCACTTTGCATCTTGTTTTGAGATTAAGA 75193 Score = 159 bits (176), Expect = 8e-34 Identities = 169/220 (77%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||||||||| || ||| | || || || || ||||| | || || ||| || ||| Sbjct 76095 CAAATTTTCGTTAAGACTTTAACTGGTAAGACTATCACTTTGGAAGTTGAATCTTCTGAC 76036 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| ||||| ||| |||||||| ||||||||||| |||||||| ||||| ||| Sbjct 76035 ACCATCGATAACGTGAAATCGAAGATTCAAGACAAAGAAGGTATCCCTCCAGACCAACAA 75976 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102 || | || || || || || ||| | |||||||| || || |||| | || |||||| | Sbjct 75975 AGATTAATTTTTGCAGGTAAGCAGTTGGAAGATGGCAGAAC-CTTGTCTGACTATAACAT 75917 Query 178103 CCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 |||||| ||||| || | |||||||| |||||| | ||| Sbjct 75916 CCAAAAGGAATCCACTTTACATCTTGTCTTGAGATTAAGA 75877 Score = 156 bits (172), Expect = 1e-32 Identities = 168/220 (76%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||||||||| ||||| | || || || || ||||| | || || ||| || ||| Sbjct 75183 CAAATTTTCGTCAAAACCTTAACCGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGAC 75124 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| |||||||| |||||||| ||||||||||| || ||||| ||||| ||| Sbjct 75123 ACCATCGATAACGTCAAGTCTAAGATTCAAGACAAAGAAGGTATTCCTCCAGACCAACAA 75064 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102 || | || || || || || ||| | |||||||| || || |||| | || |||||| | Sbjct 75063 AGATTAATTTTTGCAGGTAAGCAGTTGGAAGATGGCAGAAC-CTTGTCTGACTATAACAT 75005 Query 178103 CCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 |||||| ||||| || | |||||||| |||||| | ||| Sbjct 75004 CCAAAAGGAATCCACTTTACATCTTGTCTTGAGATTAAGA 74965 Score = 150 bits (166), Expect = 4e-31 Identities = 167/220 (76%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||||||||| ||||| | || || || || ||||| | || || ||| || ||| Sbjct 75639 CAAATTTTCGTCAAAACCTTAACCGGTAAGACCATCACTTTGGAAGTCGAATCTTCCGAC 75580 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| |||||||| |||||||| ||||||||||| || ||||| ||||| ||| Sbjct 75579 ACCATCGATAACGTCAAGTCTAAGATTCAAGACAAAGAAGGTATTCCTCCAGACCAACAA 75520 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102 || | || || || || || ||| | |||||| | || || |||| | || |||||| | Sbjct 75519 AGATTAATTTTTGCAGGTAAGCAGTTGGAAGATAGCAGAAC-CTTGTCTGACTATAACAT 75461 Query 178103 CCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 |||||| ||||| || | |||||||| |||||| | ||| Sbjct 75460 CCAAAAGGAATCCACTTTACATCTTGTCTTGAGATTAAGA 75421 >seq4 Length=1700866 Score = 129 bits (142), Expect = 1e-24 Identities = 160/219 (73%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||||||||| ||||| | ||||| || || || ||| | || || ||| || ||| Sbjct 1530873 CAAATTTTCGTCAAAACCTTAACAGGTAAGACCATTACCTTGGAAGTCGAATCTTCCGAC 1530932 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || || || || ||||| || ||||| ||||| || ||||| ||||| ||| Sbjct 1530933 ACCATTGACAATGTTAAGTCTAAGATCCAAGACAAGGAAGGTATTCCTCCAGACCAACAA 1530992 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | ||||| || || || || | |||||||| || ||| | |||| || ||| || Sbjct 1530993 AGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTACAACATC 1531052 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 ||||| ||||| || |||| | || |||||| | ||| Sbjct 1531053 CAAAAGGAATCCACTTTGCACTTGGTCTTGAGATTGAGA 1531091 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203731092040358