Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20lactis_20[refseq_20GCF_5F000002515.2_202004-07-02] 7 sequences; 10,729,447 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq5 102 8e-17 seq4 82.4 8e-11 >seq5 Length=2234072 Score = 102 bits (112), Expect = 8e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| ||||| | || || || |||||||| | || |||||| | || Sbjct 75637 ATGCAAATTTTCGTCAAAACCTTAACCGGTAAGACCATCACTTTGGAAGTCGAATCTTCC 75578 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| ||||| || |||| |||||||| || ||||| | ||||| Sbjct 75577 GACACCATCGATAACG-TCAAGTCTAAGATTCAAGACAAAGAAGGTATCCCTCCAGACCA 75519 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || | || | || || || ||| |||| || | | ||| | ||| ||||| Sbjct 75518 ACAAAGATTAATTTTTGCAGGTAAGCAGTTGGAAGATGGCAGAACCTTGTCCGATTACAA 75459 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||| || || |||| ||||||| || ||| | || || || || Sbjct 75458 CATCCAAAAAGAATCCACTTTGCATCTTGTTTTGAGATTAAGAGGTGG 75411 Score = 102 bits (112), Expect = 8e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| ||||| | || || || |||||||| | || |||||| | || Sbjct 75865 ATGCAAATTTTCGTCAAAACCTTGACTGGTAAGACCATCACTTTGGAAGTCGAATCTTCC 75806 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| ||||| || |||| |||||||| || ||||| | ||||| Sbjct 75805 GACACCATCGATAACG-TCAAGTCTAAGATTCAAGACAAAGAAGGTATCCCTCCAGACCA 75747 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || | || | || || || ||| |||| || | | ||| | ||| ||||| Sbjct 75746 ACAAAGATTAATTTTTGCAGGTAAGCAGTTGGAAGATGGCAGAACCTTGTCCGATTACAA 75687 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||| || || |||| ||||||| || ||| | || || || || Sbjct 75686 CATCCAAAAAGAATCCACTTTGCATCTTGTTTTGAGATTAAGAGGTGG 75639 >seq4 Length=1715506 Score = 82.4 bits (90), Expect = 8e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| ||||| | || || || ||||| ||| | || |||||| | || Sbjct 1545371 ATGCAAATTTTCGTCAAAACCTTAACAGGTAAGACCATTACCTTGGAAGTCGAATCTTCC 1545430 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | | ||| || || | ||||| || || || || | ||||| Sbjct 1545431 GACACCATTGACAATGTTAAGTCTAAGATCCAAGACAAGGAAGGTATTCCTCCAGACCAA 1545490 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 ||| || | |||| || || || || |||| || | | || | |||||||||| Sbjct 1545491 CAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTACAAC 1545550 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGCGG 40919 ||||| ||||| |||| |||| | || ||| | ||||| || || || Sbjct 1545551 ATCCAAAAGGAATCCACTTTGCACTTGGTCTTGAGATTGAGAGGTGGTGG 1545600 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515219154918320