Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20lactis_20[refseq_20GCF_5F000002515.2_202004-07-02] 7 sequences; 10,729,447 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq6 154 1e-32 seq3 140 3e-28 seq5 105 6e-18 seq4 89.7 5e-13 >seq6 Length=2602197 Score = 154 bits (170), Expect = 1e-32 Identities = 580/902 (64%), Gaps = 21/902 (2%) Strand=Plus/Plus Query 57525 GAGAATCCCCGTAGATTTGTCATGTTTCCGATTGAATATCCAGACATTTGGAACATGTAC 57584 |||||| ||| | ||||| | || || || | || | || |||||| | || Sbjct 1393961 GAGAATAAGCGTCGTTTTGTTCTCTTCCCAATCAAGTACCATGAGATTTGGGAAGCATAT 1394020 Query 57585 AAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGAGC 57644 || | ||| ||||| || || ||||| | |||||| | || |||| |||||| || | Sbjct 1394021 AAGAGGGCCGAAGCGTCTTTCTGGACTGCAGAAGAAATCGATTTGTCCAAGGATTTGCAC 1394080 Query 57645 GATTGGGATTCCCTCAAAGAATCTGAGAGAAATTTTATTAAACACGTG----TTGGCGTT 57700 |||||| | | || |||| || |||| || || | | | | |||||||| Sbjct 1394081 GATTGGAACAACAG-AATGAATGAGAACGAAAGGTTTTTTATCTCTAGAATTTTGGCGTT 1394139 Query 57701 TTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCACAAGAAGT 57760 ||||| || || |||||||| |||||||| || ||||| || | || ||| ||||| Sbjct 1394140 CTTCGCTGCCTCGGATGGTATCGTTAACGAAAACTTGGTGGAGAACTTCTCAGCTGAAGT 1394199 Query 57761 GCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACGTGCATTC 57820 ||||| | || |||| ||| || || || || ||| | || || || | ||||| Sbjct 1394200 GCAAGCACCAGAAGCGAAATGTTTCTATGGGTTCCAAATTATGATGGAGAATATCCATTC 1394259 Query 57821 AGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGA--CAACGACGAGAAACGTAGA 57878 ||| | ||||| | | || ||||| || | ||||| ||| | |||| || Sbjct 1394260 AGAGACTTATTCCTTGTTGATTGATACCTATATTAAGGATCCAAAG----GAAAGTGAGT 1394315 Query 57879 CT--GTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGCAGAGTGGTCAATCA 57936 | |||||| || |||||||| || || || | ||||| || ||| | |||| Sbjct 1394316 TTTTGTTCAATGCTATCGAAACTATCCCACAAATTAAAGAAAAGGCTGAATGGGCTATCA 1394375 Query 57937 AATGGATAAAAAGCGCCACGGCCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCG 57996 |||||| || | ||| ||| | || || | | || ||||| || || | Sbjct 1394376 GATGGATTCAAGATGATGATGCCTTGTTTGGTGAAAGATTGGTTGCTTTCGCTGCTGTGG 1394435 Query 57997 AAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGA 58056 ||||| | ||||| || || |||||| || || || ||| ||||||| || | | Sbjct 1394436 AAGGTGTGTTCTTCTCCGGTTCCTTTGCTGCTATCTTCTGGTTGAAGAAGAAGGGGTTAA 1394495 Query 58057 TGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGATT 58116 |||| || |||| || ||||||||||| | | || || ||||| ||||| || | Sbjct 1394496 TGCCTGGTTTGACTTTCTCTAACGAGTTGATCTGTAGAGATGAAGGTCTACATACAGACT 1394555 Query 58117 TTGCGTGCCTAATGTACTCTCACATTGTCAATAAACCGACGCGGGATCGCATCTTGG--- 58173 |||| || ||| | | | || | |||||||| | | || || ||| Sbjct 1394556 TTGCCTGTCTACTCTTTGCCCATTTGAAGAATAAACCAAATCCAGA---AATTGTGGAAA 1394612 Query 58174 ACATTATCACCGAGGCGGTCGCGATCGAAAATGAG-TTTGTCACCGAAGCCCTACCGGTG 58232 | || || || || || |||| || ||||| ||| | ||| || || ||||| || Sbjct 1394613 AGATCATTACAGAAGCTGTCGAAATTGAAAA-GAGATACTTCATGGATGCTCTACCCGTT 1394671 Query 58233 GCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGAGTTTGTTGCCGACAGA 58292 | | | ||||||||| || || ||| | ||| | || ||||| ||||||||| Sbjct 1394672 TCTCTATTGGGTATGAACGCAGACTTAATGAACCAATACGTGGAATTTGTCGCCGACAGA 1394731 Query 58293 CTTTTGCTCGAACTGATTGGAGAGCGTCATTACAACACGAAAAATCCGTTTGATTTTATG 58352 | ||| ||| || | || ||| ||| | || || || ||||| ||| Sbjct 1394732 TTATTGGTCGCCTTGGGTAACAAGAAATATTTCAATGTCACCAACCCATTCGATTTCATG 1394791 Query 58353 AATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTCGaaaaaaaaGTTAGCGAATATCAA 58412 | ||||| | | || ||||| |||||||||||||| | ||| ||| || ||| Sbjct 1394792 GAAAATATCTCCTTGGCTGGTAAGACCAACTTTTTCGAAAAGAGAGTCTCCGATTACCAA 1394851 Query 58413 AA 58414 || Sbjct 1394852 AA 1394853 Score = 125 bits (138), Expect = 6e-24 Identities = 229/333 (69%), Gaps = 12/333 (4%) Strand=Plus/Minus Query 23239 TTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTAACAGTCGGCCAGGCC 23298 ||||| |||||| ||| || | | |||||||| |||| ||||| || | || || Sbjct 110329 TTCTTTCTCGTATCTTTCATAAAGCTTATCAAATTCATCACCATAACAATCAGTTAGCCC 110270 Query 23299 GGGCGATTGCATC---GGACACATGAGAC---TCCACATTGAGTCATTTTCAACGCGTCT 23352 || | || |||| ||| | | ||| || |||| ||| ||||| || | Sbjct 110269 AGGTGCTT-CATCTGGGGAAAAAATTGACCAGTCTTCATT-----ATTCTCAACCCGCTT 110216 Query 23353 CATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTT 23412 |||||| ||||| |||||||| || || || |||| || | || | || |||||||| Sbjct 110215 CATAAAGAGATCAGGTATCCAGAGGGCATAAAACAAATCTCTTGCCCTCATTTCCTCTTT 110156 Query 23413 GCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTA 23472 ||| |||||| ||| | ||| ||||| | | ||| |||||||| ||||| | || Sbjct 110155 GCCATGATTCTTTCTCAGTTGCAAGAAGTCAATTATGTCTGCATGCCAGGGCTCCAAATA 110096 Query 23473 AACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTT 23532 | || || || ||||| ||||| || || ||||| || || | ||| ||||| || Sbjct 110095 TATACAGAATGCTCCTGGTCTTTTATTTCCACCTTGATCAACATACCTGGCAGTGTTATT 110036 Query 23533 GTACACTCTTAGCATCGGCACGAGACCGTTGGA 23565 | | || |||| ||| ||||| || || ||||| Sbjct 110035 GAAAACCCTTAACATTGGCACAAGGCCATTGGA 110003 >seq3 Length=1753957 Score = 140 bits (154), Expect = 3e-28 Identities = 281/417 (67%), Gaps = 0/417 (0%) Strand=Plus/Plus Query 23455 ATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGAC 23514 |||||| || || | ||| | || || || || |||||||| || || || || || || Sbjct 695150 ATGCCATGGTTCAATGTATAAAGCGAAGGCACCTGGTCTCTTGTTACCACCTTGGTCAAC 695209 Query 23515 GTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCC 23574 |||||| || ||||||||| | || | | ||| || | || ||| || || | ||| Sbjct 695210 GTAACGAGCAGTGTTGTTGAAGACACGGATCATTGGAATGATACCATTAGAAGTTCCGTT 695269 Query 23575 TACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCC 23634 || || | ||||| | | || | |||||||| ||| || || || || || Sbjct 695270 GGTACCAGCAATGTAAGAACCAGTAGAACGGATGTTGTGAATGTGCAACCCAATACCACC 695329 Query 23635 GCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTC 23694 | | || || ||||| || |||| |||| || ||||| || || |||||| || Sbjct 695330 AGCAGTCTTTGAGATCATAGCACATTCCTTCAAGGTATCGTAAATACCTTCGATGGAATC 695389 Query 23695 CTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAA 23754 |||||| | || ||||||||||| || |||||||| | | || ||| | || ||| Sbjct 695390 CTCTTTCATAGCAACCAAGAAACAAGATGACATTTGAGGATGAGGAGTACCAGCGTTGAA 695449 Query 23755 CAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGC 23814 || ||| || ||||| || || |||| | |||||||| ||||| || || | | Sbjct 695450 CAATGTAGGAGAAGCGTGGGTGAAATATCTTTGAGACATTAGGTTGTAAGTCTCTAATAC 695509 Query 23815 GGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGG 23871 || || || | ||||| ||||| | || || | ||| ||||||| ||| || Sbjct 695510 TCGTTCTATATCGTTACCGTGAATACCAACAGCCACTCTCATAATCATGTGTTGTGG 695566 Score = 82.4 bits (90), Expect = 7e-11 Identities = 101/138 (73%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 22452 GGTTCACCACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACG 22511 |||| || | ||| ||||| || ||||| || || || ||| |||||||||||| | | Sbjct 694135 GGTTGACAATTTGGAACTCACCAGACAAAACACGACGAGAGTACATGTTGGATGTGTATG 694194 Query 22512 GTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCA 22571 |||| ||| |||| |||| |||| || |||| || || || || ||||| || || | Sbjct 694195 GTTCAAAACATTCGTTGTAACCCAAAATTTGAGATGTGGATGCTGTTGGCATTGGAGCAA 694254 Query 22572 ACAGTAGCGAGTTTCTCA 22589 || | |||||||||| Sbjct 694255 CCAACAATGAGTTTCTCA 694272 >seq5 Length=2234072 Score = 105 bits (116), Expect = 6e-18 Identities = 163/233 (70%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 31189 AAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACC 31248 |||||||||||||||||| |||||| | || || || || ||||| | || |||||| | Sbjct 76097 AAACATGCAAATTTTCGTTAAGACTTTAACTGGTAAGACTATCACTTTGGAAGTTGAATC 76038 Query 31249 GTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGA 31308 || |||| |||| | || ||| || || ||||| ||||| | || || || Sbjct 76037 TTCTGACACCATCGATAACGTGAAATCGAAGATTCAAGACAAAGAAGGTATCCCTCCAGA 75978 Query 31309 CCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTA 31368 ||| || | |||| || || || || ||||||||||| | || || || || Sbjct 75977 CCAACAAAGATTAATTTTTGCAGGTAAGCAGTTGGAAGATGGCAGAACCTTGTCTGACTA 75918 Query 31369 TAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 |||||| ||||| ||||| ||| | ||||| || | ||| | || || |||| Sbjct 75917 TAACATCCAAAAGGAATCCACTTTACATCTTGTCTTGAGATTAAGAGGTGGTA 75865 Score = 98.7 bits (108), Expect = 9e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||||||||| || || |||| || || || ||||| | || || ||| | ||| Sbjct 75865 ATGCAAATTTTCGTCAAAACCTTGACTGGTAAGACCATCACTTTGGAAGTCGAATCTTCC 75806 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | ||||| | || ||||| ||||| | || || ||||| Sbjct 75805 GACACCATCGATAACGTCAAGTCTAAGATTCAAGACAAAGAAGGTATCCCTCCAGACCAA 75746 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || | |||| || || || || ||||||||||| | || || |||||| ||| Sbjct 75745 CAAAGATTAATTTTTGCAGGTAAGCAGTTGGAAGATGGCAGAACCTTGTCCGATTACAAC 75686 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || ||||||||||| ||| | ||||| || | ||| | || || |||| Sbjct 75685 ATCCAAAAAGAATCCACTTTGCATCTTGTTTTGAGATTAAGAGGTGGTA 75637 Score = 93.3 bits (102), Expect = 4e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||||||||| || || | || || || || ||||| | || || ||| | ||| Sbjct 75637 ATGCAAATTTTCGTCAAAACCTTAACCGGTAAGACCATCACTTTGGAAGTCGAATCTTCC 75578 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | ||||| | || ||||| ||||| | || || ||||| Sbjct 75577 GACACCATCGATAACGTCAAGTCTAAGATTCAAGACAAAGAAGGTATCCCTCCAGACCAA 75518 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || | |||| || || || || ||||||||||| | || || |||||| ||| Sbjct 75517 CAAAGATTAATTTTTGCAGGTAAGCAGTTGGAAGATGGCAGAACCTTGTCCGATTACAAC 75458 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || ||||||||||| ||| | ||||| || | ||| | || || |||| Sbjct 75457 ATCCAAAAAGAATCCACTTTGCATCTTGTTTTGAGATTAAGAGGTGGTA 75409 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||||||||| || || |||| || || || ||||| | || || ||| | ||| Sbjct 75181 ATGCAAATTTTCGTCAAAACCTTGACTGGTAAGACCATCACTTTGGAAGTCGAATCTTCC 75122 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | ||||| | || ||||| ||||| | || || ||||| Sbjct 75121 GACACCATCGATAACGTCAAGTCTAAGATTCAAGACAAAGAAGGTATTCCTCCAGACCAA 75062 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || | |||| || || || || ||||||||||| | || || || |||||| Sbjct 75061 CAAAGATTAATTTTTGCAGGTAAGCAGTTGGAAGATGGCAGAACCTTGTCTGACTATAAC 75002 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 || ||||| ||||| ||| | ||||| || | ||| | || || || Sbjct 75001 ATCCAAAAGGAATCCACTTTACATCTTGTCTTGAGATTAAGAGGTGG 74955 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||||||||| || || | || || || || ||||| | || || ||| | ||| Sbjct 75409 ATGCAAATTTTCGTCAAAACCTTAACCGGTAAGACCATCACTTTGGAAGTCGAATCTTCC 75350 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | ||||| | || ||||| ||||| | || || ||||| Sbjct 75349 GACACCATCGATAACGTCAAGTCTAAGATTCAAGACAAAGAAGGTATCCCTCCAGACCAA 75290 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || | |||| || || || || ||||||||||| | || || || |||||| Sbjct 75289 CAAAGATTAATTTTTGCAGGTAAGCAGTTGGAAGATGGCAGAACCTTGTCTGACTATAAC 75230 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || ||||| ||||| ||| | ||||| || | ||| | || || |||| Sbjct 75229 ATCCAAAAGGAATCCACTTTACATCTTGTCTTGAGATTAAGAGGTGGTA 75181 >seq4 Length=1715506 Score = 89.7 bits (98), Expect = 5e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 ||||||||||||||| || || | ||||| || || || ||| | || || ||| | || Sbjct 1545370 CATGCAAATTTTCGTCAAAACCTTAACAGGTAAGACCATTACCTTGGAAGTCGAATCTTC 1545429 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||||| | || | || || | || ||||||||||| | || || ||||| Sbjct 1545430 CGACACCATTGACAATGTTAAGTCTAAGATCCAAGACAAGGAAGGTATTCCTCCAGACCA 1545489 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 || | | || || ||||| || || |||||||| || ||| || ||| || || Sbjct 1545490 ACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTACAA 1545549 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420 ||| ||||| ||||| ||| | || |||| | ||| |||| || ||| Sbjct 1545550 CATCCAAAAGGAATCCACTTTGCACTTGGTCTTGAGATTGAGAGGTGGT 1545598 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445766360995440