Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20lactis_20[refseq_20GCF_5F000002515.2_202004-07-02] 7 sequences; 10,729,447 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq3 268 1e-66 seq6 161 1e-34 >seq3 Length=1753957 Score = 268 bits (296), Expect = 1e-66 Identities = 809/1241 (65%), Gaps = 20/1241 (2%) Strand=Plus/Plus Query 63019 ACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAA 63078 |||| || || || | || | |||||| ||||| |||||| |||||||| ||||| | Sbjct 694792 ACTTAATGGTACCCAGGTTCTTTTGATTGCTCTTCAAGTTACAAGCATCCTTGTAAAGCA 694851 Query 63079 TGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCT 63138 |||| |||||||| ||||| | || | ||| | || || | ||| | | | |||| Sbjct 694852 TGAACGGAGTACCTGTTTCTGTTTGCGCTTCCAAGATAGCATACCATAATTTTTGGGCCT 694911 Query 63139 TTATTATAGATTTGTATCTC--CTTTCTCTTTCGTATAGAGTATACAATCGTTCGAACTC 63196 | | | ||| || | | | |||||||||||| | ||||| | ||| || || Sbjct 694912 TAACGGTT--TTTCTACCACGACCTTCTCTTTCGTAACGTTCATACATTTCTTCAAATTC 694969 Query 63197 GTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACACATCAACGACCACTCTCC 63256 || || || | | || | ||| ||||| ||| | | ||| | ||| || Sbjct 694970 TTCACCGTAAGCGTCAGGTAAACCGGGAGCTTCATTAGGAGAGAACAAGGTCCAGTCCTG 695029 Query 63257 GTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCT 63316 || | | ||||| ||||| || | |||||||||||| | || |||| |||||| Sbjct 695030 GTTCTTTTCCACTCTCTTCATGAACAAATCAGGAATCCACAATGCAGGGAATAAATCTCT 695089 Query 63317 TGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGA 63376 | | | ||| || ||||| |||||| | | ||| | ||| | | |||||||| Sbjct 695090 AGCACGAATTTCTTCCTTTCCATGATTCTTCCTGATATCAATGAAATCGAAGATATCAGA 695149 Query 63377 ATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTAT 63436 |||||| ||||| | ||||| || | | || || | ||||| || || || || | Sbjct 695150 ATGCCATGGTTCAATGTATAAAGCGAAGGCACCTGGTCTCTTGTTACCACCTTGGTCAAC 695209 Query 63437 GTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATT 63496 ||| | ||| ||||| || | || | | ||||||||| ||||| || || | || || Sbjct 695210 GTAACGAGCAGTGTTGTTGAAGACACGGATCATTGGAATGATACCATTAGAAGTTCCGTT 695269 Query 63497 GGTACCGGAGATATAGCCTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCC 63556 |||||| | || || ||| | | ||| || || ||| | || || || || Sbjct 695270 GGTACCAGCAATGTAAGAACCAGTAGAACGGATGTTGTGAATGTGCAACCCAATACCACC 695329 Query 63557 TGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATC 63616 || | || ||||| | || ||| || || || || || || ||||| ||| ||| Sbjct 695330 AGCAGTCTTTGAGATCATAGCACATTCCTTCAAGGTATCGTAAATACCTTCGATGGAATC 695389 Query 63617 ATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAA 63676 || |||| || | ||||| |||||||| || ||| ||| || || || || Sbjct 695390 CTCTTTCATAGCAACCAAGAAACAAGATGACATTTGAGGATGAGGAGTACCAGCGTTGAA 695449 Query 63677 TAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTC-AATAG 63735 || |||||||||||||| || || || ||| ||| | ||| ||||| ||||| |||| Sbjct 695450 CAATGTAGGAGAAGCGTGGGTGAAATATCTTTGAGACATTAGGTTGTAAGTCTCTAATA- 695508 Query 63736 CTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTC 63795 || |||||||| ||||| || || || || | ||| | |||||| || || | Sbjct 695509 CTCGTTCTATATCGTTACCGTGAATACCAACAGCCACTCTCATAATCATGTGTTGTGGAC 695568 Query 63796 TTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAA 63855 |||| ||| || | ||| |||||||||| || ||| || || || ||||| | Sbjct 695569 GTTCAGCAACCTTACCATCGATTCTCAACAAGTAAGAACGTTCTAAGGTCTTGAAACCGA 695628 Query 63856 AATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGCTTATCCTTATATT 63915 | || ||| || || |||| ||||||| ||| | || || | | |||||| Sbjct 695629 AGTAATTGAATTGGAAATCTCTGTCGTAAACGATAGCAGAGTTCAAAGTGTCCTTA---- 695684 Query 63916 TGTTAACTATATCCATGGTA-ATACTT-----GAAATAATCGGAGAATGTTTCCCATTTT 63969 ||| | || | || || | |||| ||||| || || || || | ||| | Sbjct 695685 --TTATCCATGACAATCTTATAAACTTCGTCGGAAATCATTGGGGAGTGAATACCAGTCC 695742 Query 63970 TAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCT 64029 | |||||||| | | | | || || || | |||| | || ||||| | |||| || Sbjct 695743 TTGGATTAACCCATTGGTACAAGTCGTCAACAACTTGAGAGAACTGTTTTGTAGTTTGCT 695802 Query 64030 TGTGTAGATTTGATATGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATGTTGTGTAG 64089 |||| | ||| || || || ||||| || || || | |||||||| ||||| || | Sbjct 695803 TGTGCAAATTAGAAATAGCAATTCTAGCAGCCAGGGTAGCATAATCTGGATGGATAGTGG 695862 Query 64090 TACAAGT-GGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTA 64148 | || || || | |||| || |||| | | |||||||| || || || || || | | Sbjct 695863 T-CATGTAAGCACATGTTTCAGCAGCCAAATTATCCAATTCCACGGTAGTAACACCTTCA 695921 Query 64149 TATATTCCTTGAATAACCTTCATAGCTATTTTAATAGGATCTATATGATCCGTGTTTAAG 64208 || | || ||||| | || ||||||| || ||| ||||| | | | ||| Sbjct 695922 TAAACACCAGAAATAATACGCTGAGTGATTTTAACAGCATCGATATGTTTTGCATCTAAA 695981 Query 64209 CCATAGCACAATTTTCTAATACGAGACGTGATTTTATCAAA 64249 ||||| || | | | ||| | ||||| |||||||| Sbjct 695982 CCATAACAGAGACGTGACACACGCGCAGTGATCTTATCAAA 696022 >seq6 Length=2602197 Score = 161 bits (178), Expect = 1e-34 Identities = 574/885 (65%), Gaps = 29/885 (3%) Strand=Plus/Minus Query 62670 GCCTCTAATGCACCGTAATAAATGGTTTCAAAGATCTTCTTATTTAGA-TCTTGTGCTTC 62728 ||||| | ||| ||| ||| ||||||||||| |||| || |||| | || | || || Sbjct 110835 GCCTCGATAGCAGCGTGATATATGGTTTCAAAAATCTGTTTGTTTAAAGTCGCG-GCATC 110777 Query 62729 CGGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAAT 62788 ||||||||| | |||| || || | ||| || || |||||||| ||||| Sbjct 110776 AACCGATTCAAATGGAGTACGGCAGAGCATGAATGTGTCTGCCAACCCTTGAACCCCAAT 110717 Query 62789 ACCGATAGGTCTATGTCTCTTATTAGAGATTTC-AGCTTCTGGAATAGGATAATAATTAA 62847 | | | ||| || | ||| |||| ||||| ||| || |||| |||||| | | Sbjct 110716 AGCCAAAGGCCTGTTTCTTATATTTCC-ATTTCTAGCCTCAGGAACAGGATATTTTCCCA 110658 Query 62848 TATCTATAATTTTATTGAGATTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAA 62907 ||| ||| | ||| | |||| | || | || || || |||| | ||||| | | Sbjct 110657 CATCGATAGTCCTATCTAAATTTTTAACGAGAACCTTAACAACATGATGTAGTTTCACGA 110598 Query 62908 AATCAAATC------GCCCATCT--------ATT-ACAAACATGTTCAATGCAACAGATG 62952 | |||||| | ||||| ||| ||| | | || |||||||||| Sbjct 110597 AGTCAAATACAGGCGGTCCATCGGAACTCAAATTGACATAAGTAGGTAAGGCAACAGATG 110538 Query 62953 CCAGATTACACACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGAT 63012 | |||||||| || || ||||| | | | || | | || || |||||||| Sbjct 110537 CTAGATTACAGACAGCAACCTCTTCTGGAGAGCTGTACTCGACAATTTCGCAGCAAAGAT 110478 Query 63013 TACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTAT 63072 || | |||||| || | ||||| |||||| ||||| ||||| ||||| |||| Sbjct 110477 TAGATGATTTGATAACGCCGAGATTTTTCTGATTAGATTTTTTATTACATGCATCTTTAT 110418 Query 63073 AAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTC 63132 | || ||||| || ||||| || | ||| || | ||| || ||| | | Sbjct 110417 AGAGCATGAACGGCACTCCAGTCTCCGTTTGACTTTGAAGTATCTCTGACCAAATTTGTT 110358 Query 63133 GAGCCTTTATTATAGATTTGTATCTCCT--TTCTCTTTCGTATAGAGTATACAATCGT-T 63189 | || || ||| | || || | |||| | |||||| ||| || | | | Sbjct 110357 GCGCTTTCATTTTT--TTCCTAGGAATTAGTTCTTTCTCGTATCTTTCATA-AAGCTTAT 110301 Query 63190 CGAACTCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACACATCAACGACC 63249 | || || || || || || | | ||| |||||| || | | | |||| Sbjct 110300 CAAATTCATCACCATAACAATCAGTTAGCCCAGGTGCTTCATCTGGGGAAAAAATTGACC 110241 Query 63250 ACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATA 63309 | ||| | | || || || || ||||||||||||||||| ||||| || || ||| | Sbjct 110240 AGTCTTCATTATTCTCAACCCGCTTCATAAAGAGATCAGGTATCCAGAGGGCATAAAACA 110181 Query 63310 GATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAA 63369 |||||||| || |||||| || || ||||||| | || | | ||| | || | Sbjct 110180 AATCTCTTGCCCTCATTTCCTCTTTGCCATGATTCTTTCTCAGTTGCAAGAAGTCAATTA 110121 Query 63370 TATCAGAATGCCACGGTTCCAAGTATATGGCCATAA--CTCCAGGCCGTTTGTTTCCTCC 63427 | || | |||||| || ||||| ||||| || || |||| || | ||| ||||| || Sbjct 110120 TGTCTGCATGCCAGGGCTCCAAATATAT--ACAGAATGCTCCTGGTCTTTTATTTCCACC 110063 Query 63428 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGA 63487 ||||| | || || || |||||||| |||| || |||||||| | || || || || Sbjct 110062 TTGATCAACATACCTGGCAGTGTTATTGAAAACCCTTAACATTGGCACAAGGCCATTGGA 110003 Query 63488 TATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATT 63532 | | || |||| ||| |||||||| ||||| | ||||| ||||| Sbjct 110002 TGTTCCGTTGGAACCTGAGATATATGCTCCATTTGCACGGATATT 109958 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629817544890960