Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20lactis_20[refseq_20GCF_5F000002515.2_202004-07-02] 7 sequences; 10,729,447 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq3 187 2e-42 seq6 131 2e-25 >seq3 Length=1753957 Score = 187 bits (206), Expect = 2e-42 Identities = 367/541 (68%), Gaps = 4/541 (1%) Strand=Plus/Plus Query 38011 TTTTCTACGCGTTCCATAAATAAATCAGGTACCCATAATGCAGTAAATAAATCTTTGGTT 38070 ||||| || | | ||| || |||||||| | ||| ||||||| ||||||||| | | Sbjct 695034 TTTTCCACTCTCTTCATGAACAAATCAGGAATCCACAATGCAGGGAATAAATCTCTAGCA 695093 Query 38071 CTATATTCTTCGTTCCCTACATTCTTTCTTAAGCTTAGAAAATCGAATATATCAGCGTGC 38130 | | |||||| || || |||||| || | | |||||||| ||||||| ||| Sbjct 695094 CGAATTTCTTCCTTTCCATGATTCTTCCTGATATCAATGAAATCGAAGATATCAGAATGC 695153 Query 38131 CATGGTTC--TATATAAATCGACATTGCTCCTGGTCTTTTATCACCTCCCTGATTAATAT 38188 |||||||| | |||||| || | || |||||||| || | ||| || || | || | Sbjct 695154 CATGGTTCAATGTATAAAGCG--AAGGCACCTGGTCTCTTGTTACCACCTTGGTCAACGT 695211 Query 38189 ATCTAACTGTGTTATTATATATTCTTAACATAGGTACTATACCATTAGATTTGCCGTTTA 38248 | | | | ||||| || | | | | ||| || | ||||||||||| | ||||| Sbjct 695212 AACGAGCAGTGTTGTTGAAGACACGGATCATTGGAATGATACCATTAGAAGTTCCGTTGG 695271 Query 38249 TACCGGATATATAAGTACCCTTAGCTCGTATATTACTTATCGACAATCCTATTCCACCTG 38308 |||| | || |||| ||| ||| || || || || ||| || || ||||| | Sbjct 695272 TACCAGCAATGTAAGAACCAGTAGAACGGATGTTGTGAATGTGCAACCCAATACCACCAG 695331 Query 38309 CATGTTTTGATATTAAAGCGCATTGTTTTAACGTATCAAATATACCTTCTATACTGTCAT 38368 || ||||| || | ||| |||| || || ||||| | |||||||| || || | Sbjct 695332 CAGTCTTTGAGATCATAGCACATTCCTTCAAGGTATCGTAAATACCTTCGATGGAATCCT 695391 Query 38369 CCTTTATTGGTAGTATAAAACAACTAGACATTTGAGGCAATGGAGTTCCGGCGTTAAATA 38428 | || || | | | |||||| ||||||||||| ||||| || ||||| || | Sbjct 695392 CTTTCATAGCAACCAAGAAACAAGATGACATTTGAGGATGAGGAGTACCAGCGTTGAACA 695451 Query 38429 ATGTAGGAGATGCATGTATGAACCATTTTTCCGACAAATAATTATATGTTTCTATTACAT 38488 |||||||||| || || |||| || ||| |||| || || || |||| ||| Sbjct 695452 ATGTAGGAGAAGCGTGGGTGAAATATCTTTGAGACATTAGGTTGTAAGTCTCTAATACTC 695511 Query 38489 CATCTATATCACCGCCGTGAATACCTAGAGATACCCTCATTAGCATATGTTGTGGTCTTT 38548 |||||||| ||||||||||| | || || ||||| | ||| |||||||| | || Sbjct 695512 GTTCTATATCGTTACCGTGAATACCAACAGCCACTCTCATAATCATGTGTTGTGGACGTT 695571 Query 38549 C 38549 | Sbjct 695572 C 695572 Score = 104 bits (114), Expect = 2e-17 Identities = 489/767 (64%), Gaps = 21/767 (3%) Strand=Plus/Plus Query 36814 GATGCCGATTTTGTTCTCATATAATACATTCCAGTTTTTAGCCCCAATCTCCATCCGTAA 36873 ||||| | || |||||| | || ||||| ||||| || | ||| | |||||||||| Sbjct 693816 GATGCAGCTTGTGTTCTTAGGTAGTACATACCAGTCTTCAAACCCTTTTTCCATCCGTAG 693875 Query 36874 AAATGCATACTGGTCAGTT---TTGCGTATG-TAGGATTATCTATATATATTGTCATTGA 36929 |||||||| | |||| || | ||| | || | |||| || | | || Sbjct 693876 AAATGCAT----GGAAGTTAACTTACCCATGGTTGGTGCACGAATATGGATATTTAAGGA 693931 Query 36930 TTGACTTTGATCTATAAACGCACCTCTGTCGGCTGCCATTTCTAAAATACATTTTTGAGA 36989 |||| |||||| || | ||| | | |||||| ||||| || | |||| |||||||| Sbjct 693932 TTGAGATTGATCAATGTAAGCAGCACGGTCGGCCGCCATGTCGATAATATGCTTTTGAGA 693991 Query 36990 TATCTCCCAAACCGTTTTATATATTTGTTTTATATTATCTGGTAAATCT---AAATGTTG 37046 | |||||||| || || |||| | || | | | ||| | || | || | || Sbjct 693992 CAATTCCCAAACAGTCTTGTATAGGTCCTTCAATTCTTGTGGGATATTTGGTAAGTTCTG 694051 Query 37047 AATAGAACCATTAT--GTAACACAATTGTATTCTTTATGTCATTATTCCACATATTTCTA 37104 ||| |||||||| | | || | || ||| | || | | || ||| ||| | | Sbjct 694052 AATGGAACCATTGTCGGCAATAATATGAGATT--TCATAGCTTCATCCCAAATACC-CAA 694108 Query 37105 CTTATT-AGTTCTCTCAATAGGTGTGGATTTACAACCTGAAAATCTCCAGATAATACTCT 37163 | | | || ||||| || ||| || |||| || || || ||||| || || | Sbjct 694109 GTCAACCAAGTCATGCAATAAGTATGGGTTGACAATTTGGAACTCACCAGACAAAACACG 694168 Query 37164 TCTTGTATATATATTGCTAGTATATGGTTCAATGGACTCATTATTACTTAATATTTGAGA 37223 | | || || ||| || |||||||||| | || || | || || |||||||| Sbjct 694169 ACGAGAGTACATGTTGGATGTGTATGGTTCAAAACATTCGTTGTAACCCAAAATTTGAGA 694228 Query 37224 TGTAGATGCAGTAGGCATTGGTGCTATTAGAAGGCTATTTCTCAATCCATGTGTATTAAT 37283 ||| ||||| || |||||||| || | | | ||||||| |||| || || Sbjct 694229 TGTGGATGCTGTTGGCATTGGAGCAACCAACAATGAGTTTCTCATACCATTCAACTTGAT 694288 Query 37284 T--CTCTTTTTTAGTTCATTCCAATCCCATAAATCTGTTGGGTTCTTTAACCACATATCA 37341 | ||||| ||| |||||| ||||||| | | ||||| |||| ||| | ||| Sbjct 694289 TTGTTCTTTCAAAGT--ATTCCAGTCCCATAGAGCAGTTGGTGTCTTACCCCATAAATCG 694346 Query 37342 TATTGTAGAATACCTTTACTCGCTGGAGAATCGTTATATGTCTCATAAGGTCCGTAAATT 37401 |||| | ||||| | || |||||| | |||| |||||| | || | | Sbjct 694347 AATTGCAATTGACCTTGAGATGCAGGAGAACCTGGGAATGTTTCATAATGGCCTTCTTCT 694406 Query 37402 TTAGCTAGTTCGCAACTAGATTCTAGTGCGGCATAATATATTGTTTCGAAAATTTGTATA 37461 || || | ||| || ||| || ||| || || |||||||| |||| || Sbjct 694407 TTGGCCAATTCCATGGAAGCTTCGCAGGCACCATGGTAAATGGTTTCGAAGATTTCAATG 694466 Query 37462 TTTAATATTTTTGCTTCTTCGCTATCGAATGCATAGCCCAATAATATAAACACATCAGCC 37521 || | | | || |||||||| ||| |||| | | ||| | ||||| | || || Sbjct 694467 TTCAGTTTCTTAGCTTCTTCAGAATCAAATGGCAAACGCAACATCATAAAAGCGTCGGCT 694526 Query 37522 AAACCCTGAACACCGATACCTATGGGTCTATGTTTCTTATTAGATCT 37568 | ||| || ||||| | | | || ||||| ||| || | || ||||| Sbjct 694527 AGACCTTGGACACCCAAAGCAATAGGTCTGTGTCTCATGTTCGATCT 694573 >seq6 Length=2602197 Score = 131 bits (144), Expect = 2e-25 Identities = 395/606 (65%), Gaps = 8/606 (1%) Strand=Plus/Minus Query 11612 AAATGTTTAAACATTAAACACGCAAAATCACAATGTAAACCTTCGTCTCTACTTATTAGT 11671 ||||| ||| | || ||| ||||| || ||||| |||||| ||||||| || | Sbjct 1394580 AAATGGGCAAAGAGTAGACAGGCAAAGTCTGTATGTAGACCTTCATCTCTACAGATCAAC 1394521 Query 11672 TCATTAGAAAATGTTAATCCGGGCATCAATCCTCGtttttttATCCAAAATATAGCAGCA 11731 || ||||| || || || || ||||| || || || || | ||| || ||||||||| Sbjct 1394520 TCGTTAGAGAAAGTCAAACCAGGCATTAACCCCTTCTTCTTCAACCAGAAGATAGCAGCA 1394461 Query 11732 AATGAACCAGAAAAGAATATTCCCTCCACAGCTGCAAATGCTACTACTCTTTCTCCATAT 11791 || ||||| || ||||| | || |||||||| || || || || | |||||| ||| | Sbjct 1394460 AAGGAACCGGAGAAGAACACACCTTCCACAGCAGCGAAAGCAACCAATCTTTCACCAAAC 1394401 Query 11792 A---CCTTGT-TGCTAGATATCCATTTTCTGGCCCAATCAGCTTTCTTTTTTACGCATTC 11847 | | | | || || |||||| | | ||||| ||||| || | ||| | | Sbjct 1394400 AAGGCATCATCATCTTGA-ATCCATCTGATAGCCCATTCAGCCTTTTCTTTAATTTGTGG 1394342 Query 11848 CATTGTTTCTATAGCGTTAAATAAATGCATTTTTTCTATATTATCTCTTACATATGTATC 11907 || ||||| ||||| || || ||| | |||| | ||| | | ||| ||||| Sbjct 1394341 GATAGTTTCGATAGCATTGAACAAAAACTCACTTTCCTTTGGATCCTTAATATAGGTATC 1394282 Query 11908 TATTAATAAACTATACATTTCTGAATGAATATTTTCCATAGCTATTTGAAATCCATAGAA 11967 || || || ||| | |||||||| ||||| ||||| ||||| || |||||||| Sbjct 1394281 AATCAACAAGGAATAAGTCTCTGAATGGATATTCTCCATCATAATTTGGAACCCATAGAA 1394222 Query 11968 ACATCGTGCCTCTGAACACTGTACATCCACATAAAATCTTTCCGCTAAATTCTCATTTAC 12027 |||| || |||| || || || | | || | ||| | || || || || || Sbjct 1394221 ACATTTCGCTTCTGGTGCTTGCACTTCAGCTGAGAAGTTCTCCACCAAGTTTTCGTTAAC 1394162 Query 12028 AATACCATCACTAGATGCAAAAAATGCTAGTATATGTTTTATAAAGTATTTTTCG---TC 12084 |||||||| | || || || || | || ||||| | ||||| || Sbjct 1394161 GATACCATCCGAGGCAGCGAAGAACGCCAAAATTCTAGAGATAAAAAACCTTTCGTTCTC 1394102 Query 12085 TTTAGTTAATTTATCCCAATCATCTAAATCTTTTGATAAATCTACTTCTTCAACGGTCCA 12144 || || || | |||||| | ||||| || || ||||| | |||||| | ||||| Sbjct 1394101 ATTCATTCTGTTGTTCCAATCGTGCAAATCCTTGGACAAATCGATTTCTTCTGCAGTCCA 1394042 Query 12145 AAAACTTGCCACTGATTGTTTATACATTTTCCAGATATCATGATACTTAATAGGGAAAAT 12204 ||| || | | ||||| || ||| || ||||| ||||| || ||||| | Sbjct 1394041 GAAAGACGCTTCGGCCCTCTTATATGCTTCCCAAATCTCATGGTACTTGATTGGGAAGAG 1393982 Query 12205 AACGAA 12210 ||| || Sbjct 1393981 AACAAA 1393976 Score = 122 bits (134), Expect = 8e-23 Identities = 199/287 (69%), Gaps = 0/287 (0%) Strand=Plus/Minus Query 37996 GACCATTCTTCATCTTTTTCTACGCGTTCCATAAATAAATCAGGTACCCATAATGCAGTA 38055 ||||| ||||||| || || || || | |||||| | |||||||| ||| | ||| | Sbjct 110244 GACCAGTCTTCATTATTCTCAACCCGCTTCATAAAGAGATCAGGTATCCAGAGGGCATAA 110185 Query 38056 AATAAATCTTTGGTTCTATATTCTTCGTTCCCTACATTCTTTCTTAAGCTTAGAAAATCG 38115 || |||||| | | || ||| || || || ||||||||| | | || || Sbjct 110184 AACAAATCTCTTGCCCTCATTTCCTCTTTGCCATGATTCTTTCTCAGTTGCAAGAAGTCA 110125 Query 38116 AATATATCAGCGTGCCATGGTTCTATATAAATCGACATTGCTCCTGGTCTTTTATCACCT 38175 | ||| || || ||||| || || | ||| || | | ||||||||||||||||| || Sbjct 110124 ATTATGTCTGCATGCCAGGGCTCCAAATATATACAGAATGCTCCTGGTCTTTTATTTCCA 110065 Query 38176 CCCTGATTAATATATCTAACTGTGTTATTATATATTCTTAACATAGGTACTATACCATTA 38235 || |||| || ||| || | |||||||| | | |||||||| || || | ||||| Sbjct 110064 CCTTGATCAACATACCTGGCAGTGTTATTGAAAACCCTTAACATTGGCACAAGGCCATTG 110005 Query 38236 GATTTGCCGTTTATACCGGATATATAAGTACCCTTAGCTCGTATATT 38282 ||| | ||||| ||| || ||||| | || || || || ||||| Sbjct 110004 GATGTTCCGTTGGAACCTGAGATATATGCTCCATTTGCACGGATATT 109958 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468524759004080