Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20lactis_20[refseq_20GCF_5F000002515.2_202004-07-02] 7 sequences; 10,729,447 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq4 98.7 8e-16 seq5 87.8 1e-12 >seq4 Length=1715506 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 || || | || ||| || ||||| || | |||| |||||||| | ||||| |||||| Sbjct 1545597 CCACCTCTCAATCTCAAGACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCGGAC 1545538 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 || || | | || |||||||| || || ||||| ||||||| ||||| || | || Sbjct 1545537 AAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGAGGA 1545478 Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062 | |||||| || || |||| || || || ||| |||||| || ||||| Sbjct 1545477 ATACCTTCCTTGTCTTGGATCTTAGACTTAACATTGTCAATGGTGTCGGAAGATTCGACT 1545418 Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 || | || || || || || |||| ||||| || ||||||||||| Sbjct 1545417 TCCAAGGTAATGGTCTTACCTGTTAAGGTTTTGACGAAAATTTGCAT 1545371 >seq5 Length=2234072 Score = 87.8 bits (96), Expect = 1e-12 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 42894 TCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTC 42953 ||| || || | ||| | |||| || ||||| | |||||||||||||| || | | Sbjct 75422 TCTCAAAACAAGATGCAAAGTGGATTCTTTTTGGATGTTGTAATCGGACAAGGTTCTGCC 75481 Query 42954 GTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTT 43013 || ||||| || || || |||||||| |||| ||||| || | || | ||||||||| Sbjct 75482 ATCTTCCAACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAGGGATACCTTCTTT 75541 Query 43014 TTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTAT 43073 || ||| ||||| | | | |||||| || ||||| || | || || Sbjct 75542 GTCTTGAATCTTAGACTTGACGTTATCGATGGTGTCGGAAGATTCGACTTCCAAAGTGAT 75601 Query 43074 AGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 || || ||||||| ||||| || ||||||||||| Sbjct 75602 GGTCTTACCGGTTAAGGTTTTGACGAAAATTTGCAT 75637 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381369567464406