Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20lactis_20[refseq_20GCF_5F000002515.2_202004-07-02] 7 sequences; 10,729,447 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq6 114 1e-20 seq5 109 6e-19 >seq6 Length=2602197 Score = 114 bits (126), Expect = 1e-20 Identities = 278/410 (68%), Gaps = 17/410 (4%) Strand=Plus/Plus Query 50437 GTTGAAGGTGTGtttttttCCGGTAGCTTTGCAGCCATATTTTACATTAAAACCTTAGGC 50496 || ||||||||||| || |||||| |||||| || || || | | || | || Sbjct 1394432 GTGGAAGGTGTGTTCTTCTCCGGTTCCTTTGCTGCTATCTTCTGGTTGAAGAAGAAGGGG 1394491 Query 50497 ATAATGCCCGGCCTCACGTTTAGCAACGAGTTGATTTCGCGCGACGAAGGAATGCACACA 50556 ||||||| || | || || ||||||||||| | | || ||||| | || ||| Sbjct 1394492 TTAATGCCTGGTTTGACTTTCTCTAACGAGTTGATCTGTAGAGATGAAGGTCTACATACA 1394551 Query 50557 GACTTTGCGTGTTTGTACTACAATACGCGCGTAAATGAAAAATTATC-ATACGAAACAAT 50615 |||||||| ||| |||| | || | | |||| ||| | | | | | ||| Sbjct 1394552 GACTTTGCCTGT-----CTACTCTTTGCCCATT--TGAAGAATAAACCAAATCCAGAAAT 1394604 Query 50616 TTTGGACATGTTCAA---AGAAGCCGTCGACATCGAAAAAGAGTTT-TTCACGGACGCTT 50671 | |||| | | ||| |||||| ||||| || ||||| ||| | |||| ||| ||| Sbjct 1394605 TGTGGAAAAGATCATTACAGAAGCTGTCGAAATTGAAAA-GAGATACTTCATGGATGCTC 1394663 Query 50672 TACCCGTGGCATTGTTGGGCATGAACGCAGACATGATGTGCGAGTACATTGAGTTTGTTG 50731 ||||||| | | ||||| |||||||||||| | ||| | | ||| | || ||||| | Sbjct 1394664 TACCCGTTTCTCTATTGGGTATGAACGCAGACTTAATGAACCAATACGTGGAATTTGTCG 1394723 Query 50732 CAGACAGATTGTTGTTGCAGCTGGGACAAC-CGAAATACTATAATG-CACGTAACCCCTT 50789 | |||||||| ||| | | || || ||| |||||| | |||| ||| ||||| || Sbjct 1394724 CCGACAGATTATTGGT-CGCCTTGGGTAACAAGAAATATTTCAATGTCAC-CAACCCATT 1394781 Query 50790 TCCGTTTATGAATAACATATCGTTGGAGGGCAAAACAAACTTTTTCGAAA 50839 || ||| | || || || |||| || || || ||||||||||||| Sbjct 1394782 CGATTTCATGGAAAATATCTCCTTGGCTGGTAAGACCAACTTTTTCGAAA 1394831 >seq5 Length=2234072 Score = 109 bits (120), Expect = 6e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || |||| ||| | |||||| | ||| | || ||||||||||| |||||||||||| | Sbjct 75411 CCACCTCTTAATCTCAAAACAAGATGCAAAGTGGATTCTTTTTGGATGTTGTAATCGGAC 75470 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | || || ||||| | || ||||| ||| | || | | ||| || || ||||| Sbjct 75471 AAGGTTCTGCCATCTTCCAACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAGGG 75530 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 || ||||||||||| ||| || || | | || | ||||| | | ||| ||| Sbjct 75531 ATACCTTCTTTGTCTTGAATCTTAGACTTGACGTTATCGATGGTGTCGGAAGATTCGACT 75590 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185 || | ||| | ||||| ||||| || ||||| ||||| ||||||||| Sbjct 75591 TCCAAAGTGATGGTCTTACCGGTTAAGGTTTTGACGAAAATTTGCATA 75638 Score = 109 bits (120), Expect = 6e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || |||| ||| | |||||| | ||| | || ||||||||||| |||||||||||| | Sbjct 75639 CCACCTCTTAATCTCAAAACAAGATGCAAAGTGGATTCTTTTTGGATGTTGTAATCGGAC 75698 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | || || ||||| | || ||||| ||| | || | | ||| || || ||||| Sbjct 75699 AAGGTTCTGCCATCTTCCAACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAGGG 75758 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 || ||||||||||| ||| || || | | || | ||||| | | ||| ||| Sbjct 75759 ATACCTTCTTTGTCTTGAATCTTAGACTTGACGTTATCGATGGTGTCGGAAGATTCGACT 75818 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185 || | ||| | ||||| || ||||| ||||| ||||| ||||||||| Sbjct 75819 TCCAAAGTGATGGTCTTACCAGTCAAGGTTTTGACGAAAATTTGCATA 75866 Score = 89.7 bits (98), Expect = 5e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 142957 GCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCT 143016 ||| |||| ||| | ||| || | ||| | || ||||| ||||| ||||| || || Sbjct 74954 GCCACCTCTTAATCTCAAGACAAGATGTAAAGTGGATTCCTTTTGGATGTTATAGTCAGA 75013 Query 143017 CATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 143076 || || || ||||| | || ||||| ||| | || | | ||| || || ||||| Sbjct 75014 CAAGGTTCTGCCATCTTCCAACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAGG 75073 Query 143077 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTAC 143136 || ||||||||||| ||| || || | | || | ||||| | | ||| || Sbjct 75074 AATACCTTCTTTGTCTTGAATCTTAGACTTGACGTTATCGATGGTGTCGGAAGATTCGAC 75133 Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185 ||| | ||| | ||||| || ||||| ||||| ||||| ||||||||| Sbjct 75134 TTCCAAAGTGATGGTCTTACCAGTCAAGGTTTTGACGAAAATTTGCATA 75182 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || |||| ||| | ||| || | ||| | || ||||| ||||| ||||| || || | Sbjct 75183 CCACCTCTTAATCTCAAGACAAGATGTAAAGTGGATTCCTTTTGGATGTTATAGTCAGAC 75242 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | || || ||||| | || ||||| ||| | || | | ||| || || ||||| Sbjct 75243 AAGGTTCTGCCATCTTCCAACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAGGG 75302 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 || ||||||||||| ||| || || | | || | ||||| | | ||| ||| Sbjct 75303 ATACCTTCTTTGTCTTGAATCTTAGACTTGACGTTATCGATGGTGTCGGAAGATTCGACT 75362 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185 || | ||| | ||||| ||||| || ||||| ||||| ||||||||| Sbjct 75363 TCCAAAGTGATGGTCTTACCGGTTAAGGTTTTGACGAAAATTTGCATA 75410 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 507014355636240