Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20lactis_20[refseq_20GCF_5F000002515.2_202004-07-02]
7 sequences; 10,729,447 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq3 102 1e-16
seq1 87.8 3e-12
>seq3
Length=1753957
Score = 102 bits (112), Expect = 1e-16
Identities = 315/467 (67%), Gaps = 34/467 (7%)
Strand=Plus/Minus
Query 97776 GGTTTGAGAAACTCTTTGCTGGTGGCACCGATGCCCACGGCTACCACTTCCCAAGTGTTT 97835
||| |||||||||| ||| |||| || || ||||| || || |||| || ||| | ||
Sbjct 694276 GGTATGAGAAACTCATTGTTGGTTGCTCCAATGCCAACAGCATCCACATCTCAAATTTTG 694217
Query 97836 GGCAATGCTGAATCTTTTGAACCGTTCACGTCAAACATGTACCAGAGACGCACCCAGTCT 97895
|| | |||| ||||||||| | ||| || ||||||||| | || ||||
Sbjct 694216 GGTTACAACGAATGTTTTGAACCATACACATCCAACATGTACTCTCGTCGTGTTTTGTCT 694157
Query 97896 GGAGAGTTTCAATTGACCAACGTGCACTTGGTTCGAGACTTGGA--AC--GGCTCAATCT 97951
|| ||||| ||| | |||| |||| | | ||||||| || || | || |
Sbjct 694156 GGTGAGTTCCAAATTGTCAACCCATACTTATTGCATGACTTGGTTGACTTGGGT--ATTT 694099
Query 97952 GTG--GAA-CGATGACATGGCCCAGTTGATCATGTACAACAATGGGTCCATTCAAAACAT 98008
| | ||| | |||| || | || | || || | ||||||| |||||||| ||| |
Sbjct 694098 GGGATGAAGCTATGAAAT--CTCATATTAT--TGC-CGACAATGGTTCCATTCAGAAC-T 694045
Query 98009 TACCATC-ATCCCGGAAGAGTTGCGCAGAATCTA--CAAGACTGTCTGGGAGATTCCGAC 98065
||||| ||||| |||| ||| || | ||| ||||||||| ||||| ||| | |
Sbjct 694044 TACCAAATATCCCACAAGAATTGA--AGGACCTATACAAGACTGTTTGGGA-ATT--GTC 693990
Query 98066 CAAGACGC---TGATCGATATGGCTGCCGACAGAGGTGTCTACATTGACCAGAGTCAATC 98122
| | || | ||||| ||||| |||||| | | || |||||||| || ||||||
Sbjct 693989 TCAAAAGCATATTATCGACATGGCGGCCGACCGTGCTGCTTACATTGATCAATCTCAATC 693930
Query 98123 GTTCAATCTGTACGTTGCCGAGC-CCACCTACAGTCGTA---TGACTTCGATACACTTTT 98178
|| ||| | | || || || ||| | || ||| | ||||| || || || |
Sbjct 693929 CTTAAATATCCATATT--CGTGCACCAAC--CATGGGTAAGTTAACTTCCATGCATTTCT 693874
Query 98179 ACGCATGGAACAAGGGCCTCAAGACGGGCATGTACTATCTGAGAACA 98225
||| |||||| ||||| | ||||| || |||||||| || ||||||
Sbjct 693873 ACGGATGGAAAAAGGGTTTGAAGACTGGTATGTACTACCTAAGAACA 693827
>seq1
Length=1062590
Score = 87.8 bits (96), Expect = 3e-12
Identities = 251/384 (65%), Gaps = 23/384 (6%)
Strand=Plus/Plus
Query 70035 TGGATTCGCTCGGCTTCACCGACAGACAAGAGGGCGATCTGGGGCCAGTGTACGGATTCC 70094
|||| || || || || || |||||| |||||| ||| | || ||||| ||||| ||||
Sbjct 698954 TGGACTCACTTGGGTTGACTGACAGAAGAGAGGGGGATTTAGGACCAGTTTACGGGTTCC 699013
Query 70095 AGTGGAGGCACTCGGGCACCAAGTATGTAGAC-TGCGAGACAGACTATTCGGGTCAGGGT 70153
| ||||| || | || || | ||| |||| || || || ||| ||||| |||
Sbjct 699014 AATGGAGACATTTTGGGGCCGAATATA-AGACATGTGATGATGATTATAGTGGTCAAGGT 699072
Query 70154 GTTGATCAATTGCAGACAATCATTGACACTCTCAAGACCAATCCAACAGATAGGAGGATC 70213
|||||||| ||| || || ||| | | | ||||| |||||| || || || ||
Sbjct 699073 GTTGATCAGTTGAAGGAGATTATTCATAAGTTGAAGACAAATCCATACGACAGAAGAATA 699132
Query 70214 GTAATGTGCTCATGGAATCCTGCAGATTTGCACCAAATGGCACTACCACCGTGTCACTGT 70273
| | | ||||||| ||| | ||||| | | | ||||| |||| || || || |
Sbjct 699133 ATTCTTTCTGCATGGAACCCTCCGGATTTCCCCAAGATGGCTTTACCGCCATGCCATGTT 699192
Query 70274 TTGGCTCAGTTTTAC-TC-GT-------------ACGATGGCAA------ATTGTCATGC 70312
|| | || |||||| || || | | || ||| |||||||||
Sbjct 699193 TTCTCGCAATTTTACGTCAGTTTCCCCAAGGGAGAAGGTGCCAAACCAAGATTGTCATGT 699252
Query 70313 TTAATGTATCAGAGGAGTGCCGACATGGGCCTCGGTGTACCCTTTAACATTGCAAGCTAT 70372
|| | |||||||| || ||||| || || |||||||||||||| || |||
Sbjct 699253 GTACTTTATCAGAGATCATGTGATATGGGTCTAGGAGTACCCTTTAACATCGCGTCGTAT 699312
Query 70373 TCTATGTTGACGCACATGATTGCT 70396
| | ||||| | |||||||||
Sbjct 699313 GCGCTACTGACGAAGATGATTGCT 699336
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741059135157320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |