Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20lactis_20[refseq_20GCF_5F000002515.2_202004-07-02] 7 sequences; 10,729,447 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq3 102 1e-16 seq1 87.8 3e-12 >seq3 Length=1753957 Score = 102 bits (112), Expect = 1e-16 Identities = 315/467 (67%), Gaps = 34/467 (7%) Strand=Plus/Minus Query 97776 GGTTTGAGAAACTCTTTGCTGGTGGCACCGATGCCCACGGCTACCACTTCCCAAGTGTTT 97835 ||| |||||||||| ||| |||| || || ||||| || || |||| || ||| | || Sbjct 694276 GGTATGAGAAACTCATTGTTGGTTGCTCCAATGCCAACAGCATCCACATCTCAAATTTTG 694217 Query 97836 GGCAATGCTGAATCTTTTGAACCGTTCACGTCAAACATGTACCAGAGACGCACCCAGTCT 97895 || | |||| ||||||||| | ||| || ||||||||| | || |||| Sbjct 694216 GGTTACAACGAATGTTTTGAACCATACACATCCAACATGTACTCTCGTCGTGTTTTGTCT 694157 Query 97896 GGAGAGTTTCAATTGACCAACGTGCACTTGGTTCGAGACTTGGA--AC--GGCTCAATCT 97951 || ||||| ||| | |||| |||| | | ||||||| || || | || | Sbjct 694156 GGTGAGTTCCAAATTGTCAACCCATACTTATTGCATGACTTGGTTGACTTGGGT--ATTT 694099 Query 97952 GTG--GAA-CGATGACATGGCCCAGTTGATCATGTACAACAATGGGTCCATTCAAAACAT 98008 | | ||| | |||| || | || | || || | ||||||| |||||||| ||| | Sbjct 694098 GGGATGAAGCTATGAAAT--CTCATATTAT--TGC-CGACAATGGTTCCATTCAGAAC-T 694045 Query 98009 TACCATC-ATCCCGGAAGAGTTGCGCAGAATCTA--CAAGACTGTCTGGGAGATTCCGAC 98065 ||||| ||||| |||| ||| || | ||| ||||||||| ||||| ||| | | Sbjct 694044 TACCAAATATCCCACAAGAATTGA--AGGACCTATACAAGACTGTTTGGGA-ATT--GTC 693990 Query 98066 CAAGACGC---TGATCGATATGGCTGCCGACAGAGGTGTCTACATTGACCAGAGTCAATC 98122 | | || | ||||| ||||| |||||| | | || |||||||| || |||||| Sbjct 693989 TCAAAAGCATATTATCGACATGGCGGCCGACCGTGCTGCTTACATTGATCAATCTCAATC 693930 Query 98123 GTTCAATCTGTACGTTGCCGAGC-CCACCTACAGTCGTA---TGACTTCGATACACTTTT 98178 || ||| | | || || || ||| | || ||| | ||||| || || || | Sbjct 693929 CTTAAATATCCATATT--CGTGCACCAAC--CATGGGTAAGTTAACTTCCATGCATTTCT 693874 Query 98179 ACGCATGGAACAAGGGCCTCAAGACGGGCATGTACTATCTGAGAACA 98225 ||| |||||| ||||| | ||||| || |||||||| || |||||| Sbjct 693873 ACGGATGGAAAAAGGGTTTGAAGACTGGTATGTACTACCTAAGAACA 693827 >seq1 Length=1062590 Score = 87.8 bits (96), Expect = 3e-12 Identities = 251/384 (65%), Gaps = 23/384 (6%) Strand=Plus/Plus Query 70035 TGGATTCGCTCGGCTTCACCGACAGACAAGAGGGCGATCTGGGGCCAGTGTACGGATTCC 70094 |||| || || || || || |||||| |||||| ||| | || ||||| ||||| |||| Sbjct 698954 TGGACTCACTTGGGTTGACTGACAGAAGAGAGGGGGATTTAGGACCAGTTTACGGGTTCC 699013 Query 70095 AGTGGAGGCACTCGGGCACCAAGTATGTAGAC-TGCGAGACAGACTATTCGGGTCAGGGT 70153 | ||||| || | || || | ||| |||| || || || ||| ||||| ||| Sbjct 699014 AATGGAGACATTTTGGGGCCGAATATA-AGACATGTGATGATGATTATAGTGGTCAAGGT 699072 Query 70154 GTTGATCAATTGCAGACAATCATTGACACTCTCAAGACCAATCCAACAGATAGGAGGATC 70213 |||||||| ||| || || ||| | | | ||||| |||||| || || || || Sbjct 699073 GTTGATCAGTTGAAGGAGATTATTCATAAGTTGAAGACAAATCCATACGACAGAAGAATA 699132 Query 70214 GTAATGTGCTCATGGAATCCTGCAGATTTGCACCAAATGGCACTACCACCGTGTCACTGT 70273 | | | ||||||| ||| | ||||| | | | ||||| |||| || || || | Sbjct 699133 ATTCTTTCTGCATGGAACCCTCCGGATTTCCCCAAGATGGCTTTACCGCCATGCCATGTT 699192 Query 70274 TTGGCTCAGTTTTAC-TC-GT-------------ACGATGGCAA------ATTGTCATGC 70312 || | || |||||| || || | | || ||| ||||||||| Sbjct 699193 TTCTCGCAATTTTACGTCAGTTTCCCCAAGGGAGAAGGTGCCAAACCAAGATTGTCATGT 699252 Query 70313 TTAATGTATCAGAGGAGTGCCGACATGGGCCTCGGTGTACCCTTTAACATTGCAAGCTAT 70372 || | |||||||| || ||||| || || |||||||||||||| || ||| Sbjct 699253 GTACTTTATCAGAGATCATGTGATATGGGTCTAGGAGTACCCTTTAACATCGCGTCGTAT 699312 Query 70373 TCTATGTTGACGCACATGATTGCT 70396 | | ||||| | ||||||||| Sbjct 699313 GCGCTACTGACGAAGATGATTGCT 699336 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741059135157320