Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20lactis_20[refseq_20GCF_5F000002515.2_202004-07-02]
7 sequences; 10,729,447 total letters
Query= NC_005179.1
Length=134721
Score E
Sequences producing significant alignments: (Bits) Value
seq6 201 1e-46
>seq6
Length=2602197
Score = 201 bits (222), Expect = 1e-46
Identities = 560/853 (66%), Gaps = 37/853 (4%)
Strand=Plus/Minus
Query 12860 TTTTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTTCCTTCTAACGAAATATTT 12919
||||| || ||| ||||| ||||| |||||||| || || || | || || ||||||
Sbjct 1394853 TTTTGGTAATCGGAGACTCTCTTTTCGAAAAAGTTGGTCTTACCAGCCAAGGAGATATTT 1394794
Query 12920 TCCATAAAATCGAAAGGATTTTTCGAACAAT--AGTATTTTTTACACCCTAATTCTAGTA 12977
||||| |||||||| || || | ||| | | ||||| || || || | | |
Sbjct 1394793 TCCATGAAATCGAATGGGTTGGTG--ACATTGAAATATTTCTTGTTACCCAAGGCGACCA 1394736
Query 12978 ACAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAATCACAGTTCATTCCTATTA 13037
| |||||||| || ||||| || | ||| || |||||||| || |||||| || | ||
Sbjct 1394735 ATAATCTGTCGGCGACAAATTCCACGTATTGGTTCATTAAGTCTGCGTTCATACCCAATA 1394676
Query 13038 ATTTTACAGGCATAGCTTCTGTTAAAAAGtttttttCTATATCAACTGCTTCGATAACTA 13097
|| || | ||| || | || | | ||||| || || || ||||| ||| |
Sbjct 1394675 GAGAAACGGGTAGAGCATCCATGAAGTATCTCTTTTCAATTTCGACAGCTTCTGTAATGA 1394616
Query 13098 TGTCTCTTATTACGTTCTCTAATGGAGGATTTGATAGATGCTT---------AAACATCA 13148
| | || || | ||| ||||||| | || ||| ||| | |
Sbjct 1394615 TCT---TTTCCACAATTTCT------GGATTTGGTTTATTCTTCAAATGGGCAAAGAGTA 1394565
Query 13149 TACATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTA 13208
||| ||||| || || | ||||||||||||| || | |||||| || || || |
Sbjct 1394564 GACAGGCAAAGTCTGTATGTAGACCTTCATCTCTACAGATCAACTCGTTAGAGAAAGTCA 1394505
Query 13209 GACCCGGCAT-AAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAACCCGaaaaa 13267
||| ||||| || |||| || || || ||| || ||||||||||| ||||| || ||
Sbjct 1394504 AACCAGGCATTAACCCCTTCTTCTTCAA-CCAGAAGATAGCAGCAAAGGAACCGGAGAAG 1394446
Query 13268 aaTATTCCTTCAACTGCTGCAAACGCTATCAACCTTTCACCATACGTACTATTTTTACTC 13327
|| | ||||| || || || || || | ||| ||||||||| || || | |
Sbjct 1394445 AACACACCTTCCACAGCAGCGAAAGCAACCAATCTTTCACCAAACAAGGCATCATCATCT 1394386
Query 13328 TCTATCCACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTCATATTTTCTATTGCG 13387
| ||||| | | ||||| | || |||| ||||| ||| |||| || ||
Sbjct 1394385 TGAATCCATCTGATAGCCCATTCAGCCTTTTCTTTAATTTGTGGGATAGTTTCGATAGCA 1394326
Query 13388 TTAAATAAATAAtttttttCCTTACTGTCTAAAATATAAGTATCTATCAATAAGCTATAC 13447
|| || ||| | | ||||||| || |||||| ||||| ||||| ||| |||
Sbjct 1394325 TTGAACAAAAACTCACTTTCCTTTGGATCCTTAATATAGGTATCAATCAACAAGGAATAA 1394266
Query 13448 ATTTCTGAATGAATATTTTCCATCGCTATTTGGAAACCATAAAAACATCTAGCCTCTGAT 13507
| |||||||| ||||| |||||| |||||||| ||||| |||||| | || |||| |
Sbjct 1394265 GTCTCTGAATGGATATTCTCCATCATAATTTGGAACCCATAGAAACATTTCGCTTCTGGT 1394206
Query 13508 ACCTGAACTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTATCCCGTCACTAGCA 13567
| || ||||| | | || | || | |||||||||||||| || || || |||
Sbjct 1394205 GCTTGCACTTCAGCTGAGAAGTTCTCCACCAAGTTTTCGTTAACGATACCATCCGAGGCA 1394146
Query 13568 GCaaaaaaaGCAAGTAT----GTGCTTAATAAAtttt--ttttCGTT--TTCTGACAACT 13619
|| || || || | || | | | || || ||| || || || ||||| |
Sbjct 1394145 GCGAAGAACGCCAAAATTCTAGAGATAAAAAACCTTTCGTTCTCATTCATTCTG-----T 1394091
Query 13620 TTAACCAATCTGGAAAATCTTTTGATAAATCTACCTCCTCAACGGTCCAAAAAGAAGCAA 13679
| |||||| | ||||| || || ||||| | || || | ||||| ||||| ||
Sbjct 1394090 TGTTCCAATCGTGCAAATCCTTGGACAAATCGATTTCTTCTGCAGTCCAGAAAGACGCTT 1394031
Query 13680 CAGCCTTCTTATA 13692
| ||| |||||||
Sbjct 1394030 CGGCCCTCTTATA 1394018
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430982363231814
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |