Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20lactis_20[refseq_20GCF_5F000002515.2_202004-07-02]
7 sequences; 10,729,447 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq6 197 3e-45
seq5 145 2e-29
seq1 111 4e-19
>seq6
Length=2602197
Score = 197 bits (218), Expect = 3e-45
Identities = 378/549 (69%), Gaps = 10/549 (2%)
Strand=Plus/Plus
Query 268753 GGCCGTTGCTTCTTTTTGGACTGTAGAAGAAGTAGATCTGTCTTATGACTTAATAGATTG 268812
||||| || ||||| ||||||| ||||||| | ||| |||| | || || |||||
Sbjct 1394026 GGCCGAAGCGTCTTTCTGGACTGCAGAAGAAATCGATTTGTCCAAGGATTTGCACGATTG 1394085
Query 268813 GAAAAATTTAA--AACCAGAA-GAAAGAAGATTTATATCTTATATTCTTGCGTTTTTTGC 268869
||| || || || |||| ||||| ||||| ||| ||| | ||||| || ||
Sbjct 1394086 GAACAACAGAATGAATGAGAACGAAAGGTTTTTTATCTCTAGAATTTTGGCGTTCTTCGC 1394145
Query 268870 AGTTAGTGATGGTATCGTTAACGAAAATCTAGTAGAGAAGTTCTGTCAAGAGGTACAGAT 268929
| |||||||||||||||||||| | || ||||| |||| || || ||
Sbjct 1394146 TGCCTCGGATGGTATCGTTAACGAAAACTTGGTGGAGAACTTCTCAGCTGAAGTGCAAGC 1394205
Query 268930 TCCTGAAGCCAGATGTTTTTACGGATTCCAGATAGCTATAGAAAATATTCATTCAGAGAT 268989
|| ||||| | |||||| || || ||||| || || || ||||| ||||||||||
Sbjct 1394206 ACCAGAAGCGAAATGTTTCTATGGGTTCCAAATTATGATGGAGAATATCCATTCAGAGAC 1394265
Query 268990 GTACAGTCTATTAATAGATACTTATATAGATGATAACAACGAAAAGAAAAGACTATTTTC 269049
|| | || || ||||| ||||| | ||| ||| | |||| | | | | |||
Sbjct 1394266 TTATTCCTTGTTGATTGATACCTATATTAAGGATC-CAAAGGAAAGTGA-GTTTTTGTTC 1394323
Query 269050 --TTCTATGAGAACTATGGACTGTGTGAGaaaaaaaTCTGAATGGGCTCTGAAATGGATA 269107
| |||| |||||| | | | |||| ||||||||||| | | ||||||
Sbjct 1394324 AATGCTATCGAAACTATCCCACAAATTAAAGAAAAGGCTGAATGGGCTATCAGATGGATT 1394383
Query 269108 AACGATAGCGC-GCCTTAC--GGAGAAAGGTTAGTTGCTTTTGCCGCTGTAGAAGGTATA 269164
| ||| | ||||| || ||||| || |||||||| || ||||| |||||| |
Sbjct 1394384 CAAGATGATGATGCCTTGTTTGGTGAAAGATTGGTTGCTTTCGCTGCTGTGGAAGGTGTG 1394443
Query 269165 TTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGGTTGAAGAAAAGAGGCCTTATGCCAGGA 269224
||||| || || || ||||| |||||||| ||||||||||| | || | ||||| ||
Sbjct 1394444 TTCTTCTCCGGTTCCTTTGCTGCTATCTTCTGGTTGAAGAAGAAGGGGTTAATGCCTGGT 1394503
Query 269225 TTAACTTTCTCTAACGAATTGATAAGCAGGGACGAAGGTTTACACTGCGACTTCGCTTGT 269284
|| |||||||||||||| ||||| | || || |||||| |||| ||||| || |||
Sbjct 1394504 TTGACTTTCTCTAACGAGTTGATCTGTAGAGATGAAGGTCTACATACAGACTTTGCCTGT 1394563
Query 269285 TTATTATTT 269293
|| | |||
Sbjct 1394564 CTACTCTTT 1394572
>seq5
Length=2234072
Score = 145 bits (160), Expect = 2e-29
Identities = 170/230 (74%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || ||||||| || | || |||||||| || ||||| || || || |||||||||
Sbjct 74952 ATGCCACCTCTTAATCTCAAGACAAGATGTAAAGTGGATTCCTTTTGGATGTTATAGTCA 75011
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|| | ||||| || ||||| | || || || |||||||||| || ||||| || |||
Sbjct 75012 GACAAGGTTCTGCCATCTTCCAACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGA 75071
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || |||||||| || |||||||| | || || || || | ||| ||| || |||
Sbjct 75072 GGAATACCTTCTTTGTCTTGAATCTTAGACTTGACGTTATCGATGGTGTCGGAAGATTCG 75131
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|| || | || || ||||||||||| | ||||| || || || |||||
Sbjct 75132 ACTTCCAAAGTGATGGTCTTACCAGTCAAGGTTTTGACGAAAATTTGCAT 75181
Score = 145 bits (160), Expect = 2e-29
Identities = 172/233 (74%), Gaps = 0/233 (0%)
Strand=Plus/Plus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || ||||||| || | || |||||||| || ||||| || || || |||||||||
Sbjct 75864 ATACCACCTCTTAATCTCAAGACAAGATGTAAAGTGGATTCCTTTTGGATGTTATAGTCA 75923
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|| | ||||| || ||||| | || || || |||||||||| || ||||| || |||
Sbjct 75924 GACAAGGTTCTGCCATCTTCCAACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGA 75983
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || |||||||| || |||||||| | ||| || || || | ||| || || |||
Sbjct 75984 GGGATACCTTCTTTGTCTTGAATCTTCGATTTCACGTTATCGATGGTGTCAGAAGATTCA 76043
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTT 104562
|| || | || |||||||||||||| | || || || || || ||||| ||
Sbjct 76044 ACTTCCAAAGTGATAGTCTTACCAGTTAAAGTCTTAACGAAAATTTGCATGTT 76096
Score = 140 bits (154), Expect = 7e-28
Identities = 169/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || ||||||| || | || |||||||| || ||||| || || || |||||||||
Sbjct 75180 ATACCACCTCTTAATCTCAAGACAAGATGTAAAGTGGATTCCTTTTGGATGTTATAGTCA 75239
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|| | ||||| || ||||| | || || || |||||||||| || ||||| || |||
Sbjct 75240 GACAAGGTTCTGCCATCTTCCAACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGA 75299
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || |||||||| || |||||||| | || || || || | ||| ||| || |||
Sbjct 75300 GGGATACCTTCTTTGTCTTGAATCTTAGACTTGACGTTATCGATGGTGTCGGAAGATTCG 75359
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|| || | || || |||||||| || | ||||| || || || |||||
Sbjct 75360 ACTTCCAAAGTGATGGTCTTACCGGTTAAGGTTTTGACGAAAATTTGCAT 75409
Score = 131 bits (144), Expect = 4e-25
Identities = 167/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || ||||||| || | || ||||| || || |||||||| || || || || ||
Sbjct 75636 ATACCACCTCTTAATCTCAAAACAAGATGCAAAGTGGATTCTTTTTGGATGTTGTAATCG 75695
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|| | ||||| || ||||| | || || || |||||||||| || ||||| || |||
Sbjct 75696 GACAAGGTTCTGCCATCTTCCAACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGA 75755
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || |||||||| || |||||||| | || || || || | ||| ||| || |||
Sbjct 75756 GGGATACCTTCTTTGTCTTGAATCTTAGACTTGACGTTATCGATGGTGTCGGAAGATTCG 75815
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|| || | || || ||||||||||| | ||||| || || || |||||
Sbjct 75816 ACTTCCAAAGTGATGGTCTTACCAGTCAAGGTTTTGACGAAAATTTGCAT 75865
>seq1
Length=1062590
Score = 111 bits (122), Expect = 4e-19
Identities = 132/179 (74%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 104357 TGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGT 104416
|| || || ||||| || || || || |||||||| | |||||||| ||||| | |||
Sbjct 59921 TGCAAAGTGGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCATCTTCCAATTGC 59862
Query 104417 TTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTT 104476
|| |||||||| || | || ||||| || || || || ||||| || || ||||||||
Sbjct 59861 TTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGGATACCTTCCTTGTCTTGAATCTTA 59802
Query 104477 GCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGT 104535
| || ||||| || | ||| ||| || ||| || || | || || |||||||||||
Sbjct 59801 GACTTGACATTGTCAATGGTGTCGGAAGATTCGACTTCCAAAGTGATGGTCTTACCAGT 59743
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151398296733956
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |