Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20lactis_20[refseq_20GCF_5F000002515.2_202004-07-02] 7 sequences; 10,729,447 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq5 143 2e-29 seq4 132 4e-26 seq1 118 1e-21 >seq5 Length=2234072 Score = 143 bits (158), Expect = 2e-29 Identities = 175/239 (73%), Gaps = 0/239 (0%) Strand=Plus/Plus Query 94769 AAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACG 94828 ||| ||| || || ||||| |||| ||| || | |||||||| ||||| ||||| | | Sbjct 75627 AAAATTTGCATACCACCTCTTAATCTCAAAACAAGATGCAAAGTGGATTCTTTTTGGATG 75686 Query 94829 TTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGC 94888 || |||||| || || || ||| |||| ||| || || |||| ||||||||||| Sbjct 75687 TTGTAATCGGACAAGGTTCTGCCATCTTCCAACTGCTTACCTGCAAAAATTAATCTTTGT 75746 Query 94889 TGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCA 94948 || |||||||| |||||||||||||| | ||| || | ||||||| ||| ||||| Sbjct 75747 TGGTCTGGAGGGATACCTTCTTTGTCTTGAATCTTAGACTTGACGTTATCGATGGTGTCG 75806 Query 94949 GCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | ||||| || | |||||||| || ||||| | ||||| || || || ||||| Sbjct 75807 GAAGATTCGACTTCCAAAGTGATGGTCTTACCAGTCAAGGTTTTGACGAAAATTTGCAT 75865 Score = 140 bits (154), Expect = 3e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || ||||| |||| ||| || | || ||||| ||||||||||| | |||||| || | Sbjct 74955 CCACCTCTTAATCTCAAGACAAGATGTAAAGTGGATTCCTTTTGGATGTTATAGTCAGAC 75014 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | || || ||| |||| ||| || || |||| ||||||||||| || ||||||||| Sbjct 75015 AAGGTTCTGCCATCTTCCAACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAGGA 75074 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 |||||||||||||| | ||| || | ||||||| ||| ||||| | ||||| Sbjct 75075 ATACCTTCTTTGTCTTGAATCTTAGACTTGACGTTATCGATGGTGTCGGAAGATTCGACT 75134 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || | |||||||| || ||||| | ||||| || || || ||||| Sbjct 75135 TCCAAAGTGATGGTCTTACCAGTCAAGGTTTTGACGAAAATTTGCAT 75181 Score = 138 bits (152), Expect = 1e-27 Identities = 174/239 (73%), Gaps = 0/239 (0%) Strand=Plus/Plus Query 94769 AAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACG 94828 ||| ||| || || ||||| |||| ||| || | |||||||| ||||| ||||| | | Sbjct 75399 AAAATTTGCATACCACCTCTTAATCTCAAAACAAGATGCAAAGTGGATTCTTTTTGGATG 75458 Query 94829 TTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGC 94888 || |||||| || || || ||| |||| ||| || || |||| ||||||||||| Sbjct 75459 TTGTAATCGGACAAGGTTCTGCCATCTTCCAACTGCTTACCTGCAAAAATTAATCTTTGT 75518 Query 94889 TGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCA 94948 || |||||||| |||||||||||||| | ||| || | ||||||| ||| ||||| Sbjct 75519 TGGTCTGGAGGGATACCTTCTTTGTCTTGAATCTTAGACTTGACGTTATCGATGGTGTCG 75578 Query 94949 GCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | ||||| || | |||||||| || || || | ||||| || || || ||||| Sbjct 75579 GAAGATTCGACTTCCAAAGTGATGGTCTTACCGGTTAAGGTTTTGACGAAAATTTGCAT 75637 Score = 134 bits (148), Expect = 1e-26 Identities = 173/239 (72%), Gaps = 0/239 (0%) Strand=Plus/Plus Query 94769 AAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACG 94828 ||| ||| || || ||||| |||| ||| || | || ||||| ||||||||||| | | Sbjct 75171 AAAATTTGCATACCACCTCTTAATCTCAAGACAAGATGTAAAGTGGATTCCTTTTGGATG 75230 Query 94829 TTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGC 94888 ||||| || || || || ||| |||| ||| || || |||| ||||||||||| Sbjct 75231 TTATAGTCAGACAAGGTTCTGCCATCTTCCAACTGCTTACCTGCAAAAATTAATCTTTGT 75290 Query 94889 TGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCA 94948 || |||||||| |||||||||||||| | ||| || | ||||||| ||| ||||| Sbjct 75291 TGGTCTGGAGGGATACCTTCTTTGTCTTGAATCTTAGACTTGACGTTATCGATGGTGTCG 75350 Query 94949 GCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | ||||| || | |||||||| || || || | ||||| || || || ||||| Sbjct 75351 GAAGATTCGACTTCCAAAGTGATGGTCTTACCGGTTAAGGTTTTGACGAAAATTTGCAT 75409 Score = 127 bits (140), Expect = 2e-24 Identities = 174/243 (72%), Gaps = 0/243 (0%) Strand=Plus/Plus Query 94769 AAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACG 94828 ||| ||| || || ||||| |||| ||| || | || ||||| ||||||||||| | | Sbjct 75855 AAAATTTGCATACCACCTCTTAATCTCAAGACAAGATGTAAAGTGGATTCCTTTTGGATG 75914 Query 94829 TTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGC 94888 ||||| || || || || ||| |||| ||| || || |||| ||||||||||| Sbjct 75915 TTATAGTCAGACAAGGTTCTGCCATCTTCCAACTGCTTACCTGCAAAAATTAATCTTTGT 75974 Query 94889 TGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCA 94948 || |||||||| |||||||||||||| | ||| || | || ||| ||| |||||| Sbjct 75975 TGGTCTGGAGGGATACCTTCTTTGTCTTGAATCTTCGATTTCACGTTATCGATGGTGTCA 76034 Query 94949 GCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATG 95008 | || || || | ||||| || || ||||| | ||| || || || || |||||| Sbjct 76035 GAAGATTCAACTTCCAAAGTGATAGTCTTACCAGTTAAAGTCTTAACGAAAATTTGCATG 76094 Query 95009 CTT 95011 || Sbjct 76095 TTT 76097 >seq4 Length=1715506 Score = 132 bits (146), Expect = 4e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || |||||||||| ||| |||||||||||||| ||||||||||| | ||| || ||| | Sbjct 1545597 CCACCTCTCAATCTCAAGACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCGGAC 1545538 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | ||| | ||| |||| || || || ||||||| |||||||| || ||||||||| Sbjct 1545537 AAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGAGGA 1545478 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 |||||||| ||||| | || || | ||| || | | | ||||| | ||||| Sbjct 1545477 ATACCTTCCTTGTCTTGGATCTTAGACTTAACATTGTCAATGGTGTCGGAAGATTCGACT 1545418 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATG 95008 || | || ||||| || || || | ||||| || || || |||||| Sbjct 1545417 TCCAAGGTAATGGTCTTACCTGTTAAGGTTTTGACGAAAATTTGCATG 1545370 >seq1 Length=1062590 Score = 118 bits (130), Expect = 1e-21 Identities = 148/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || |||||||||| ||| |||||||||||||| ||||||||||| | ||| || || | Sbjct 59945 CCACCTCTCAATCTCAAAACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCAGAC 59886 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | || | ||| |||| || || || ||||||| |||||||| || ||||| || Sbjct 59885 AAGGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGG 59826 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 |||||||| ||||| | ||| || | |||||| | | | ||||| | ||||| Sbjct 59825 ATACCTTCCTTGTCTTGAATCTTAGACTTGACATTGTCAATGGTGTCGGAAGATTCGACT 59766 Query 94961 TCAATCGTGATGGTTTTTCCAGT 94983 || | |||||||| || ||||| Sbjct 59765 TCCAAAGTGATGGTCTTACCAGT 59743 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448291160774520