Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20lactis_20[refseq_20GCF_5F000002515.2_202004-07-02] 7 sequences; 10,729,447 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq3 273 3e-68 seq6 181 1e-40 >seq3 Length=1753957 Score = 273 bits (302), Expect = 3e-68 Identities = 810/1240 (65%), Gaps = 18/1240 (1%) Strand=Plus/Plus Query 62968 ACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAA 63027 |||| || || || | || | |||||| ||||| |||||| |||||||| ||||| | Sbjct 694792 ACTTAATGGTACCCAGGTTCTTTTGATTGCTCTTCAAGTTACAAGCATCCTTGTAAAGCA 694851 Query 63028 TGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCT 63087 |||| |||||||| ||||| | || | ||| | || || | ||| | | | |||| Sbjct 694852 TGAACGGAGTACCTGTTTCTGTTTGCGCTTCCAAGATAGCATACCATAATTTTTGGGCCT 694911 Query 63088 TTATTATAGATTTGTATCTC--CTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTC 63145 | | | ||| || | | | |||||||||||| || ||||| | ||| || || Sbjct 694912 TAACGGTT--TTTCTACCACGACCTTCTCTTTCGTAACGTTCATACATTTCTTCAAATTC 694969 Query 63146 GTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCC 63205 || || || | | || || ||| ||||| ||| | | ||| | ||| || Sbjct 694970 TTCACCGTAAGCGTCAGGTAAACCGGGAGCTTCATTAGGAGAGAACAAGGTCCAGTCCTG 695029 Query 63206 GTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCT 63265 || | | ||||| ||||| || | |||||||||||| | || |||| |||||| Sbjct 695030 GTTCTTTTCCACTCTCTTCATGAACAAATCAGGAATCCACAATGCAGGGAATAAATCTCT 695089 Query 63266 GGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGA 63325 | | | ||| || ||||| |||||| | | ||| | ||| | | |||||||| Sbjct 695090 AGCACGAATTTCTTCCTTTCCATGATTCTTCCTGATATCAATGAAATCGAAGATATCAGA 695149 Query 63326 ATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTAT 63385 |||||| ||||| | ||||| || | | || || | ||||| || || || || | Sbjct 695150 ATGCCATGGTTCAATGTATAAAGCGAAGGCACCTGGTCTCTTGTTACCACCTTGGTCAAC 695209 Query 63386 GTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATT 63445 ||| | ||| ||||| || | || | | ||||||||| ||||| || || | || || Sbjct 695210 GTAACGAGCAGTGTTGTTGAAGACACGGATCATTGGAATGATACCATTAGAAGTTCCGTT 695269 Query 63446 GGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCC 63505 |||||| | || || ||| | | ||| || || ||| | || || || || Sbjct 695270 GGTACCAGCAATGTAAGAACCAGTAGAACGGATGTTGTGAATGTGCAACCCAATACCACC 695329 Query 63506 TGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCCTCTATGCTATC 63565 || | || ||||| | || ||| || || || || || ||||| || ||| ||| Sbjct 695330 AGCAGTCTTTGAGATCATAGCACATTCCTTCAAGGTATCGTAAATACCTTCGATGGAATC 695389 Query 63566 ATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAA 63625 || |||| || | ||||| |||||||| || || ||| || || || || Sbjct 695390 CTCTTTCATAGCAACCAAGAAACAAGATGACATTTGAGGATGAGGAGTACCAGCGTTGAA 695449 Query 63626 TAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTC-AATAG 63684 || |||||||||||||| || || || ||| ||| | ||| ||||| ||||| |||| Sbjct 695450 CAATGTAGGAGAAGCGTGGGTGAAATATCTTTGAGACATTAGGTTGTAAGTCTCTAATA- 695508 Query 63685 CTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTC 63744 || |||||||| ||||| || || || || | ||| | |||||| || || | Sbjct 695509 CTCGTTCTATATCGTTACCGTGAATACCAACAGCCACTCTCATAATCATGTGTTGTGGAC 695568 Query 63745 TTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAA 63804 |||| | | ||| | ||| |||||||||| || ||| || || || ||||| | Sbjct 695569 GTTCAGCAACCTTACCATCGATTCTCAACAAGTAAGAACGTTCTAAGGTCTTGAAACCGA 695628 Query 63805 AATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATT 63864 | || ||| || || |||| ||||||| ||| | ||||| | | ||||||| | Sbjct 695629 AGTAATTGAATTGGAAATCTCTGTCGTAAACGATAGCAGAGTTCAAAGTGTCCTTATTAT 695688 Query 63865 TGTTAACTATATCCATGGTGATACTT-----GAAATAATCGGAGAATGTTTCCCATTTTT 63919 | || || | || | |||| ||||| || || || || | ||| | | Sbjct 695689 CCATGACAATCT-TAT----AAACTTCGTCGGAAATCATTGGGGAGTGAATACCAGTCCT 695743 Query 63920 AGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTT 63979 |||||||| | | | | || || || | |||| | || ||||| | |||| ||| Sbjct 695744 TGGATTAACCCATTGGTACAAGTCGTCAACAACTTGAGAGAACTGTTTTGTAGTTTGCTT 695803 Query 63980 GTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGT 64039 ||| | ||| || | || ||||| || || || | |||||||| ||||| || || Sbjct 695804 GTGCAAATTAGAAATAGCAATTCTAGCAGCCAGGGTAGCATAATCTGGATGGATAGTGGT 695863 Query 64040 ACAAGT-GGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTAT 64098 || || || | |||| || |||| | | |||||||| || || || || || | || Sbjct 695864 -CATGTAAGCACATGTTTCAGCAGCCAAATTATCCAATTCCACGGTAGTAACACCTTCAT 695922 Query 64099 ATATTCCTTGAATAACCTTCATAGCTATTTTAATAGGATCTATATGATCCGTGTTTAAGC 64158 | | || ||||| | || ||||||| || ||| ||||| | | | ||| | Sbjct 695923 AAACACCAGAAATAATACGCTGAGTGATTTTAACAGCATCGATATGTTTTGCATCTAAAC 695982 Query 64159 CATAACATAATTTTCTAATACGAGACGTGATTTTATCAAA 64198 ||||||| | | | ||| | ||||| |||||||| Sbjct 695983 CATAACAGAGACGTGACACACGCGCAGTGATCTTATCAAA 696022 >seq6 Length=2602197 Score = 181 bits (200), Expect = 1e-40 Identities = 578/885 (65%), Gaps = 20/885 (2%) Strand=Plus/Minus Query 33013 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 33072 |||||||| || || | ||||||||||| || || || || |||| || |||||| Sbjct 1394853 TTTTGGTAATCGGAGACTCTCTTTTCGAAAAAGTTGGTCTTACCAGCCAAGGAGATATTT 1394794 Query 33073 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTC-AGAAAT 33131 ||||||||||| || || ||||| ||||| || ||| || ||||| | | ||| Sbjct 1394793 TCCATGAAATCGAATGGGTTGGTGACATTGAAATATTTCTTGTTACCCAAGGCGACCAAT 1394734 Query 33132 CAATCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAG 33191 ||||| || ||||| ||||| | ||| ||||| | || ||||| || | || Sbjct 1394733 -AATCTGTCGGCGACAAATTCCACGTATTGGTTCATTAAGTCTGCGTTCATACCCAATAG 1394675 Query 33192 TTTAACTGGAAGAGC-CGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAA 33250 ||| || ||||| || ||| | |||| |||||| || || ||||| || | Sbjct 1394674 AGAAACGGGTAGAGCATCCATGAAGTATCTCTT-TTCAATTTCGACAGCTTCTGTAATGA 1394616 Query 33251 TAGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGA 33310 | | || ||||| | | ||| || | ||||| ||| | | ||| || | Sbjct 1394615 TCTTTTCCACAATTTCTGGATTTGGTTTATTCTTCAAATGGGCAAAGAGTAGACAGGCAA 1394556 Query 33311 AATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCA 33370 | || || ||||| || ||||||| || | ||||| || || || | || |||| Sbjct 1394555 AGTCTGTATGTAGACCTTCATCTCTACAGATCAACTCGTTAGAGAAAGTCAAACCAGGCA 1394496 Query 33371 TTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTT 33430 ||| || ||| || | ||| || || | ||| || || || || ||||| | |||| Sbjct 1394495 TTAACCCCTTCTTCTTCAACCAGAAGATAGCAGCAAAGGAACCGGAGAAGAACACACCTT 1394436 Query 33431 CTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTCA---TGTATCCACT 33487 | || ||||| || |||| | ||| || ||| | ||| ||| || ||||| Sbjct 1394435 CCACAGCAGCGAAAGCAACCAATCTTTCACCAAACAAGGCATCATCATCTTGAATCCATC 1394376 Query 33488 TTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGAT 33547 | |||||| || ||||| | ||| | || || ||||| || ||||| || | | Sbjct 1394375 TGATAGCCCATTCAGCCTTTTCTTTAATTTGTGGGATAGTTTCGATAGCATTGAACAAAA 1394316 Query 33548 AGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAAT 33607 | | |||| || ||| |||| ||| ||||| ||||| | ||| | || |||| Sbjct 1394315 ACTCACTTTCCTTTGGATCCTTAATATAGGTATCAATCAACAAGGAATAAGTCTCTGAAT 1394256 Query 33608 GAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTC-GGTAATCTGTACT 33666 | || || || || || || || || ||||||||| | || || ||| | || ||| Sbjct 1394255 GGATATTCTCCATCATAATTTGGAACCCATAGAAACATTTCGCTTCTGGTGCT-TGCACT 1394197 Query 33667 TCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAAC 33726 || | | || ||| |||| ||||| || || || || || ||| || || ||| Sbjct 1394196 TCAGCTGAGAAGTTCTCCACCAAGTTTTCGTTAACGATACCATCCGAGGCAGCGAAGAAC 1394137 Query 33727 GCCAATACATGTTTT----ATAAAATATTTTTCG-TCTGGT--GTTAGTTTATTCCAATC 33779 ||||| | || | |||||| | ||||| ||| | || || |||||||| Sbjct 1394136 GCCAAAA----TTCTAGAGATAAAAAACCTTTCGTTCTCATTCATTCTGTTGTTCCAATC 1394081 Query 33780 ATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTT 33839 | | ||| || || | ||| | |||||| | ||||| || || || || ||| | || Sbjct 1394080 GTGCAAATCCTTGGACAAATCGATTTCTTCTGCAGTCCAGAAAGACGCTTCGGCCCTCTT 1394021 Query 33840 ATACATGTTCCAGATGTCATAATATTGGATTGGGAAAATAACAAA 33884 ||| | ||| || |||| || | ||||||||| | |||||| Sbjct 1394020 ATATGCTTCCCAAATCTCATGGTACTTGATTGGGAAGAGAACAAA 1393976 Score = 167 bits (184), Expect = 3e-36 Identities = 586/903 (65%), Gaps = 29/903 (3%) Strand=Plus/Minus Query 62601 TCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTA 62660 ||||||||||| ||||| | ||| ||| ||| |||||||| || |||| || Sbjct 110853 TCAGCTAGTTCTGTGGAAGCCTCGATAGCAGCGTGATATATGGTTTCAAAAATCTGTTTG 110794 Query 62661 TTTAGA-TCTTGTGCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCCGC 62719 |||| | || | || || | ||||||||| | |||| || || | ||| || Sbjct 110793 TTTAAAGTCGCG-GCATCAACCGATTCAAATGGAGTACGGCAGAGCATGAATGTGTCTGC 110735 Query 62720 TAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTC-AGCTTCTG 62778 || |||||||| |||||| | | ||| || | ||| |||| ||||| ||| || | Sbjct 110734 CAACCCTTGAACCCCAATAGCCAAAGGCCTGTTTCTTATATTTCC-ATTTCTAGCCTCAG 110676 Query 62779 GAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACAATTACTTTGACCA 62838 ||| |||||| | | ||| ||| | ||| | |||| | || | || || || | Sbjct 110675 GAACAGGATATTTTCCCACATCGATAGTCCTATCTAAATTTTTAACGAGAACCTTAACAA 110616 Query 62839 CATCCTTCAGTTTGAGAAAATCAAATC------GCCCATCT--------ATT-ACAAACA 62883 ||| | ||||| | || |||||| | ||||| ||| ||| | Sbjct 110615 CATGATGTAGTTTCACGAAGTCAAATACAGGCGGTCCATCGGAACTCAAATTGACATAAG 110556 Query 62884 TGTTCAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTA 62943 | |||||||||||||| |||||||| || || ||||| | | | || | | Sbjct 110555 TAGGTAAGGCAACAGATGCTAGATTACAGACAGCAACCTCTTCTGGAGAGCTGTACTCGA 110496 Query 62944 TTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTT 63003 || || |||||||||| | |||||| || | ||||| |||||| |||| Sbjct 110495 CAATTTCGCAGCAAAGATTAGATGATTTGATAACGCCGAGATTTTTCTGATTAGATTTTT 110436 Query 63004 TGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAA 63063 | ||||| ||||| ||||| || ||||| || ||||| || | ||| || | | Sbjct 110435 TATTACATGCATCTTTATAGAGCATGAACGGCACTCCAGTCTCCGTTTGACTTTGAAGTA 110376 Query 63064 TCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCCT--TTCTCTTTCGTA 63121 || || ||| | | | || || ||| | || || | |||| | ||||| Sbjct 110375 TCTCTGACCAAATTTGTTGCGCTTTCATTTTT--TTCCTAGGAATTAGTTCTTTCTCGTA 110318 Query 63122 TAGTGTATACAATCGT-TCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCAT 63180 | | ||| || | | || || || || || || || | ||||| ||||| Sbjct 110317 TCTTTCATA-AAGCTTATCAAATTCATCACCATAACAATCAGTTAGCCCAGGTGCTTCAT 110259 Query 63181 CCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAA 63240 | || | | | ||||| ||| | | || || || || ||||||||||||||||| | Sbjct 110258 CTGGGGAAAAAATTGACCAGTCTTCATTATTCTCAACCCGCTTCATAAAGAGATCAGGTA 110199 Query 63241 TCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAA 63300 |||| || || ||| | |||||| | || |||||| || || ||||||| | | Sbjct 110198 TCCAGAGGGCATAAAACAAATCTCTTGCCCTCATTTCCTCTTTGCCATGATTCTTTCTCA 110139 Query 63301 GATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAA--CTCC 63358 | | | ||| | || || || | |||||| || ||||| ||||| || || |||| Sbjct 110138 GTTGCAAGAAGTCAATTATGTCTGCATGCCAGGGCTCCAAATATAT--ACAGAATGCTCC 110081 Query 63359 AGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACAT 63418 || | ||| ||||| || ||||| | || || || |||||||| |||| || ||||| Sbjct 110080 TGGTCTTTTATTTCCACCTTGATCAACATACCTGGCAGTGTTATTGAAAACCCTTAACAT 110021 Query 63419 TGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAAT 63478 ||| | || || || ||| | || |||| ||| |||||||| |||| | ||||| || Sbjct 110020 TGGCACAAGGCCATTGGATGTTCCGTTGGAACCTGAGATATATGCTCCATTTGCACGGAT 109961 Query 63479 ATT 63481 ||| Sbjct 109960 ATT 109958 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622947145492120